RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 DYNC1I1O14576 645 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 SLC4A10Q6U841 1118 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 STK26Q9P289 416 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 RBSNQ9H1K0 784 aa20.76■□□□□ 0.91
TRAF3IP1-202ENST00000391993 TMEM57Q8N5G2 664 aa20.76■□□□□ 0.91
TRAF3IP1-202ENST00000391993 ANKRD50Q9ULJ7 1429 aa20.76■□□□□ 0.91
TRAF3IP1-202ENST00000391993 AAMPQ13685 434 aa20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 PER1O15534 1290 aaPredicted RBP20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 MCCP23508 829 aa20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 PHF14O94880 888 aa20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 SRPK2P78362 688 aaKnown RBP20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 HMGN5P82970 282 aaKnown RBP20.75■□□□□ 0.91
TRAF3IP1-202ENST00000391993 DISP3Q9P2K9 1392 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 SOX12O15370 315 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 KLHL40Q2TBA0 621 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 CHD1LQ86WJ1 897 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 ZKSCAN5Q9Y2L8 839 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 KCNJ4P48050 445 aa20.74■□□□□ 0.91
TRAF3IP1-202ENST00000391993 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
TRAF3IP1-202ENST00000391993 RIPK4P57078 832 aa20.73■□□□□ 0.91
TRAF3IP1-202ENST00000391993 CDC45O75419 566 aa20.72■□□□□ 0.91
TRAF3IP1-202ENST00000391993 ANO2Q9NQ90 1003 aa20.72■□□□□ 0.91
TRAF3IP1-202ENST00000391993 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
TRAF3IP1-202ENST00000391993 FIBPO43427 364 aa20.72■□□□□ 0.91
TRAF3IP1-202ENST00000391993 FBXW7Q969H0 707 aa20.71■□□□□ 0.91
TRAF3IP1-202ENST00000391993 GOLGA6L6A8MZA4 724 aa20.71■□□□□ 0.91
TRAF3IP1-202ENST00000391993 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
TRAF3IP1-202ENST00000391993 PARD3Q8TEW0 1356 aa20.7■□□□□ 0.9
TRAF3IP1-202ENST00000391993 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 RAB3GAP1Q15042 981 aa20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 SMAP1Q8IYB5 467 aaPredicted RBP20.69■□□□□ 0.9
TRAF3IP1-202ENST00000391993 CCDC94Q9BW85 323 aaPredicted RBP20.68■□□□□ 0.9
TRAF3IP1-202ENST00000391993 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
TRAF3IP1-202ENST00000391993 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
TRAF3IP1-202ENST00000391993 TRIM27P14373 513 aa20.67■□□□□ 0.9
TRAF3IP1-202ENST00000391993 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
TRAF3IP1-202ENST00000391993 SPATA31E1Q6ZUB1 1445 aa20.66■□□□□ 0.9
TRAF3IP1-202ENST00000391993 RABEP1Q15276 862 aa20.66■□□□□ 0.9
TRAF3IP1-202ENST00000391993 DAPK1P53355 1430 aa20.66■□□□□ 0.9
TRAF3IP1-202ENST00000391993 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
TRAF3IP1-202ENST00000391993 ZGPATQ8N5A5 531 aaKnown RBP20.66■□□□□ 0.9
TRAF3IP1-202ENST00000391993 ERBINQ96RT1 1412 aa20.65■□□□□ 0.9
TRAF3IP1-202ENST00000391993 VPS37CA5D8V6 355 aaPredicted RBP20.65■□□□□ 0.9
TRAF3IP1-202ENST00000391993 MBD3O95983 291 aa20.65■□□□□ 0.9
TRAF3IP1-202ENST00000391993 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
TRAF3IP1-202ENST00000391993 FGD1P98174 961 aa20.64■□□□□ 0.9
TRAF3IP1-202ENST00000391993 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.89
TRAF3IP1-202ENST00000391993 DTNBO60941 627 aa20.64■□□□□ 0.89
TRAF3IP1-202ENST00000391993 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.89
TRAF3IP1-202ENST00000391993 INTS3Q68E01 1043 aaKnown RBP20.64■□□□□ 0.89
TRAF3IP1-202ENST00000391993 UPF3BQ9BZI7 483 aaKnown RBP20.64■□□□□ 0.89
TRAF3IP1-202ENST00000391993 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRAF3IP1-202ENST00000391993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRAF3IP1-202ENST00000391993 PKP1Q13835 747 aa20.63■□□□□ 0.89
TRAF3IP1-202ENST00000391993 REC8O95072 547 aa20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 ZBTB9Q96C00 473 aa20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 C16orf45Q96MC5 204 aaPredicted RBP20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 NOLC1Q14978 699 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 TPD52L1Q16890 204 aaPredicted RBP20.62■□□□□ 0.89
TRAF3IP1-202ENST00000391993 CDK13Q14004 1512 aaKnown RBP20.61■□□□□ 0.89
TRAF3IP1-202ENST00000391993 HMOX1P09601 288 aa20.61■□□□□ 0.89
TRAF3IP1-202ENST00000391993 OS9Q13438 667 aaPredicted RBP20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 V9GYY5 206 aaPredicted RBP20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 SMC5Q8IY18 1101 aa20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 ADCY5O95622 1261 aa20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
TRAF3IP1-202ENST00000391993 SMARCA5O60264 1052 aaPredicted RBP20.59■□□□□ 0.89
TRAF3IP1-202ENST00000391993 CCAR2Q8N163 923 aaKnown RBP20.59■□□□□ 0.89
TRAF3IP1-202ENST00000391993 TRIM5Q9C035 493 aa20.59■□□□□ 0.89
TRAF3IP1-202ENST00000391993 ABCC5O15440 1437 aa20.59■□□□□ 0.89
TRAF3IP1-202ENST00000391993 GORABQ5T7V8 394 aa20.59■□□□□ 0.89
TRAF3IP1-202ENST00000391993 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
TRAF3IP1-202ENST00000391993 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
TRAF3IP1-202ENST00000391993 TMEM132EQ6IEE7 984 aa20.57■□□□□ 0.88
TRAF3IP1-202ENST00000391993 ZFP91Q96JP5 570 aaPredicted RBP20.57■□□□□ 0.88
TRAF3IP1-202ENST00000391993 LRSAM1Q6UWE0 723 aa20.56■□□□□ 0.88
TRAF3IP1-202ENST00000391993 SKIDA1Q1XH10 827 aa20.56■□□□□ 0.88
TRAF3IP1-202ENST00000391993 CCDC66A2RUB6 948 aa20.56■□□□□ 0.88
TRAF3IP1-202ENST00000391993 NGEFQ8N5V2 710 aa20.56■□□□□ 0.88
TRAF3IP1-202ENST00000391993 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
TRAF3IP1-202ENST00000391993 RTF1Q92541 710 aaKnown RBP20.55■□□□□ 0.88
TRAF3IP1-202ENST00000391993 CCDC112Q8NEF3 446 aa20.55■□□□□ 0.88
TRAF3IP1-202ENST00000391993 TESK2Q96S53 571 aa20.55■□□□□ 0.88
TRAF3IP1-202ENST00000391993 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 GNL2Q13823 731 aaKnown RBP20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 ZBTB22O15209 634 aa20.54■□□□□ 0.88
TRAF3IP1-202ENST00000391993 CAMK4Q16566 473 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms