RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 GUCA2AQ02747 115 aa5.48□□□□□ -1.53
SNORA40.19-201ENST00000390846 FOXC1Q12948 553 aa5.48□□□□□ -1.53
SNORA40.19-201ENST00000390846 LMOD2Q6P5Q4 547 aa5.48□□□□□ -1.53
SNORA40.19-201ENST00000390846 SMYD5Q6GMV2 418 aa5.47□□□□□ -1.53
SNORA40.19-201ENST00000390846 PTCRAQ6ISU1 281 aaPredicted RBP5.47□□□□□ -1.53
SNORA40.19-201ENST00000390846 PCDHGC3Q9UN70 934 aa5.47□□□□□ -1.53
SNORA40.19-201ENST00000390846 TREML4Q6UXN2 200 aa5.46□□□□□ -1.54
SNORA40.19-201ENST00000390846 SYMPKQ92797 1274 aaKnown RBP5.46□□□□□ -1.54
SNORA40.19-201ENST00000390846 FAM217BQ9NTX9 383 aaPredicted RBP5.46□□□□□ -1.54
SNORA40.19-201ENST00000390846 GMPR2Q9P2T1 348 aaKnown RBP5.46□□□□□ -1.54
SNORA40.19-201ENST00000390846 J3QL48 77 aa5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 WNT7AO00755 349 aa5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 HOXA2O43364 376 aa5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 MDM2Q00987 491 aaPredicted RBP5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 NFX1Q12986 1120 aaKnown RBP5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 SULF1Q8IWU6 871 aa5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 CCDC102AQ96A19 550 aa5.45□□□□□ -1.54
SNORA40.19-201ENST00000390846 SIAH2O43255 324 aa5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 KDM4AO75164 1064 aa5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 TRIM32Q13049 653 aa5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 MRGPRX2Q96LB1 330 aa5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 MINK1Q8N4C8 1332 aaPredicted RBP5.44□□□□□ -1.54
SNORA40.19-201ENST00000390846 RSPH4AQ5TD94 716 aa5.43□□□□□ -1.54
SNORA40.19-201ENST00000390846 HPS1Q92902 700 aa5.43□□□□□ -1.54
SNORA40.19-201ENST00000390846 USB1Q9BQ65 265 aaKnown RBP5.43□□□□□ -1.54
SNORA40.19-201ENST00000390846 CD2BP2O95400 341 aaKnown RBP5.42□□□□□ -1.54
SNORA40.19-201ENST00000390846 SNRPBP14678 240 aaKnown RBP5.42□□□□□ -1.54
SNORA40.19-201ENST00000390846 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.19-201ENST00000390846 HAP1P54257 671 aaPredicted RBP5.42□□□□□ -1.54
SNORA40.19-201ENST00000390846 SNIP1Q8TAD8 396 aaKnown RBP5.4□□□□□ -1.54
SNORA40.19-201ENST00000390846 CTC1Q2NKJ3 1217 aa5.39□□□□□ -1.55
SNORA40.19-201ENST00000390846 RC3H1Q5TC82 1133 aaKnown RBP5.39□□□□□ -1.55
SNORA40.19-201ENST00000390846 VSIG10Q8N0Z9 540 aa5.39□□□□□ -1.55
SNORA40.19-201ENST00000390846 CYP4X1Q8N118 509 aa5.39□□□□□ -1.55
SNORA40.19-201ENST00000390846 ATP13A2Q9NQ11 1180 aa5.39□□□□□ -1.55
SNORA40.19-201ENST00000390846 AXIN1O15169 862 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 ZMYND10O75800 440 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 JUNDP17535 347 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 Q3C1V9 767 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 SPIRE2Q8WWL2 714 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 GPCPD1Q9NPB8 672 aa5.38□□□□□ -1.55
SNORA40.19-201ENST00000390846 NDUFV2P19404 249 aa5.37□□□□□ -1.55
SNORA40.19-201ENST00000390846 USP46P62068 366 aa5.37□□□□□ -1.55
SNORA40.19-201ENST00000390846 BARGINQ6ZT62 677 aa5.37□□□□□ -1.55
SNORA40.19-201ENST00000390846 MOXD2PA6NHM9 499 aa5.36□□□□□ -1.55
SNORA40.19-201ENST00000390846 WIPF1O43516 503 aa5.36□□□□□ -1.55
SNORA40.19-201ENST00000390846 WNT7BP56706 349 aa5.36□□□□□ -1.55
SNORA40.19-201ENST00000390846 SH3BP2P78314 561 aa5.36□□□□□ -1.55
SNORA40.19-201ENST00000390846 TRIM46Q7Z4K8 759 aa5.36□□□□□ -1.55
SNORA40.19-201ENST00000390846 SSTR3P32745 418 aaPredicted RBP5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 AMHR2Q16671 573 aa5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 GRIPAP1Q4V328 841 aa5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 RETREG3Q86VR2 466 aa5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 TRIM47Q96LD4 638 aa5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 KLF16Q9BXK1 252 aaPredicted RBP5.35□□□□□ -1.55
SNORA40.19-201ENST00000390846 TTC24A2A3L6 582 aaPredicted RBP5.34□□□□□ -1.55
SNORA40.19-201ENST00000390846 C11orf95C9JLR9 678 aaPredicted RBP5.34□□□□□ -1.55
SNORA40.19-201ENST00000390846 CLCN1P35523 988 aa5.34□□□□□ -1.55
SNORA40.19-201ENST00000390846 ZC3H15Q8WU90 426 aaKnown RBP5.34□□□□□ -1.55
SNORA40.19-201ENST00000390846 FDX1P10109 184 aa5.33□□□□□ -1.56
SNORA40.19-201ENST00000390846 MS4A1P11836 297 aa5.33□□□□□ -1.56
SNORA40.19-201ENST00000390846 EVA1BQ9NVM1 165 aa5.33□□□□□ -1.56
SNORA40.19-201ENST00000390846 PCDHB15Q9Y5E8 787 aa5.33□□□□□ -1.56
SNORA40.19-201ENST00000390846 TERTO14746 1132 aaKnown RBP5.32□□□□□ -1.56
SNORA40.19-201ENST00000390846 ZBTB24O43167 697 aaPredicted RBP5.32□□□□□ -1.56
SNORA40.19-201ENST00000390846 WFS1O76024 890 aa5.32□□□□□ -1.56
SNORA40.19-201ENST00000390846 CCDC24Q8N4L8 307 aa5.32□□□□□ -1.56
SNORA40.19-201ENST00000390846 NUDT12Q9BQG2 462 aa5.32□□□□□ -1.56
SNORA40.19-201ENST00000390846 CFAP99D6REC4 459 aa5.31□□□□□ -1.56
SNORA40.19-201ENST00000390846 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
SNORA40.19-201ENST00000390846 FBXO31Q5XUX0 539 aaPredicted RBP5.31□□□□□ -1.56
SNORA40.19-201ENST00000390846 GIGYF2Q6Y7W6 1299 aaKnown RBP5.31□□□□□ -1.56
SNORA40.19-201ENST00000390846 PARP9Q8IXQ6 854 aa5.31□□□□□ -1.56
SNORA40.19-201ENST00000390846 F12P00748 615 aaPredicted RBP5.3□□□□□ -1.56
SNORA40.19-201ENST00000390846 BMP1P13497 986 aa5.3□□□□□ -1.56
SNORA40.19-201ENST00000390846 BAP1Q92560 729 aa5.3□□□□□ -1.56
SNORA40.19-201ENST00000390846 ALDH1A1P00352 501 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 CCNYL3P0C7X3 344 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 KCNH2Q12809 1159 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 PTPRNQ16849 979 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 DESI1Q6ICB0 168 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 RSBN1LQ6PCB5 846 aaPredicted RBP5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 MPNDQ8N594 471 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 PRR7Q8TB68 274 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 UNC93B1Q9H1C4 597 aa5.29□□□□□ -1.56
SNORA40.19-201ENST00000390846 TRIM66O15016 1216 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 SPTLC1O15269 473 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 PER1O15534 1290 aaPredicted RBP5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 GJA5P36382 358 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 LYPD8Q6UX82 237 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 TLL2Q9Y6L7 1015 aa5.28□□□□□ -1.56
SNORA40.19-201ENST00000390846 ERBB4Q15303 1308 aa5.27□□□□□ -1.57
SNORA40.19-201ENST00000390846 NUTM1Q86Y26 1132 aa5.27□□□□□ -1.57
SNORA40.19-201ENST00000390846 ZNF511Q8NB15 262 aa5.27□□□□□ -1.57
SNORA40.19-201ENST00000390846 C6orf229H3BNL8 230 aa5.26□□□□□ -1.57
SNORA40.19-201ENST00000390846 HRCP23327 699 aa5.26□□□□□ -1.57
SNORA40.19-201ENST00000390846 LINC01559Q495D7 138 aa5.26□□□□□ -1.57
SNORA40.19-201ENST00000390846 FOXJ1Q92949 421 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms