RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
SPTBN1-203ENST00000389980 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
SPTBN1-203ENST00000389980 MED14O60244 1454 aa16.65■□□□□ 0.26
SPTBN1-203ENST00000389980 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
SPTBN1-203ENST00000389980 KNSTRNQ9Y448 316 aa16.64■□□□□ 0.25
SPTBN1-203ENST00000389980 GTF3C3Q9Y5Q9 886 aa16.64■□□□□ 0.25
SPTBN1-203ENST00000389980 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
SPTBN1-203ENST00000389980 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
SPTBN1-203ENST00000389980 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
SPTBN1-203ENST00000389980 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
SPTBN1-203ENST00000389980 RALBP1Q15311 655 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 TECPR2O15040 1411 aa16.61■□□□□ 0.25
SPTBN1-203ENST00000389980 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
SPTBN1-203ENST00000389980 TBX22Q9Y458 520 aa16.6■□□□□ 0.25
SPTBN1-203ENST00000389980 CPS1P31327 1500 aa16.6■□□□□ 0.25
SPTBN1-203ENST00000389980 FAM9BQ8IZU0 186 aa16.59■□□□□ 0.25
SPTBN1-203ENST00000389980 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.25
SPTBN1-203ENST00000389980 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.25
SPTBN1-203ENST00000389980 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.25
SPTBN1-203ENST00000389980 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
SPTBN1-203ENST00000389980 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
SPTBN1-203ENST00000389980 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
SPTBN1-203ENST00000389980 DIP2AQ14689 1571 aa16.56■□□□□ 0.24
SPTBN1-203ENST00000389980 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
SPTBN1-203ENST00000389980 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.55■□□□□ 0.24
SPTBN1-203ENST00000389980 WASLO00401 505 aaPredicted RBP16.54■□□□□ 0.24
SPTBN1-203ENST00000389980 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
SPTBN1-203ENST00000389980 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
SPTBN1-203ENST00000389980 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
SPTBN1-203ENST00000389980 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
SPTBN1-203ENST00000389980 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
SPTBN1-203ENST00000389980 KCNA6P17658 529 aa16.52■□□□□ 0.24
SPTBN1-203ENST00000389980 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
SPTBN1-203ENST00000389980 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
SPTBN1-203ENST00000389980 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
SPTBN1-203ENST00000389980 XRN1Q8IZH2 1706 aaKnown RBP16.51■□□□□ 0.23
SPTBN1-203ENST00000389980 CD163L1Q9NR16 1453 aa16.5■□□□□ 0.23
SPTBN1-203ENST00000389980 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
SPTBN1-203ENST00000389980 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
SPTBN1-203ENST00000389980 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
SPTBN1-203ENST00000389980 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
SPTBN1-203ENST00000389980 NINLQ9Y2I6 1382 aa16.49■□□□□ 0.23
SPTBN1-203ENST00000389980 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
SPTBN1-203ENST00000389980 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-203ENST00000389980 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-203ENST00000389980 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
SPTBN1-203ENST00000389980 HSPA2P54652 639 aa16.48■□□□□ 0.23
SPTBN1-203ENST00000389980 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
SPTBN1-203ENST00000389980 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
SPTBN1-203ENST00000389980 PIK3R4Q99570 1358 aa16.48■□□□□ 0.23
SPTBN1-203ENST00000389980 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
SPTBN1-203ENST00000389980 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
SPTBN1-203ENST00000389980 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
SPTBN1-203ENST00000389980 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
SPTBN1-203ENST00000389980 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
SPTBN1-203ENST00000389980 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
SPTBN1-203ENST00000389980 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
SPTBN1-203ENST00000389980 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
SPTBN1-203ENST00000389980 ATP7BP35670 1465 aa16.45■□□□□ 0.22
SPTBN1-203ENST00000389980 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
SPTBN1-203ENST00000389980 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
SPTBN1-203ENST00000389980 GGNBP2Q9H3C7 697 aa16.43■□□□□ 0.22
SPTBN1-203ENST00000389980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■■□□ 15.4
SPTBN1-203ENST00000389980 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
SPTBN1-203ENST00000389980 FYB1O15117 783 aa16.41■□□□□ 0.22
SPTBN1-203ENST00000389980 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
SPTBN1-203ENST00000389980 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
SPTBN1-203ENST00000389980 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
SPTBN1-203ENST00000389980 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
SPTBN1-203ENST00000389980 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
SPTBN1-203ENST00000389980 ITSN1Q15811 1721 aa16.38■□□□□ 0.21
SPTBN1-203ENST00000389980 NSD2O96028 1365 aa16.38■□□□□ 0.21
SPTBN1-203ENST00000389980 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
SPTBN1-203ENST00000389980 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
SPTBN1-203ENST00000389980 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
SPTBN1-203ENST00000389980 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
SPTBN1-203ENST00000389980 ACEP12821 1306 aa16.36■□□□□ 0.21
SPTBN1-203ENST00000389980 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
SPTBN1-203ENST00000389980 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
SPTBN1-203ENST00000389980 NME9Q86XW9 330 aa16.35■□□□□ 0.21
SPTBN1-203ENST00000389980 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
SPTBN1-203ENST00000389980 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
SPTBN1-203ENST00000389980 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
SPTBN1-203ENST00000389980 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
SPTBN1-203ENST00000389980 C14orf37Q86TY3 774 aa16.34■□□□□ 0.21
SPTBN1-203ENST00000389980 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
SPTBN1-203ENST00000389980 MTHFSP49914 203 aa16.34■□□□□ 0.21
SPTBN1-203ENST00000389980 NWD1Q149M9 1564 aa16.33■□□□□ 0.21
SPTBN1-203ENST00000389980 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.2
SPTBN1-203ENST00000389980 FBLN1P23142 703 aa16.33■□□□□ 0.2
SPTBN1-203ENST00000389980 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■□□□□ 9
SPTBN1-203ENST00000389980 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
SPTBN1-203ENST00000389980 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
SPTBN1-203ENST00000389980 STRCQ7RTU9 1775 aa16.33■□□□□ 0.2
SPTBN1-203ENST00000389980 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
SPTBN1-203ENST00000389980 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms