RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 BLMP54132 1417 aaPredicted RBP23.14■■□□□ 1.3
RPAIN-203ENST00000381209 FKBP8Q14318 412 aa23.14■■□□□ 1.3
RPAIN-203ENST00000381209 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.29
RPAIN-203ENST00000381209 SETD1AO15047 1707 aaKnown RBP23.14■■□□□ 1.29
RPAIN-203ENST00000381209 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
RPAIN-203ENST00000381209 UBR1Q8IWV7 1749 aa23.13■■□□□ 1.29
RPAIN-203ENST00000381209 MINK1Q8N4C8 1332 aaPredicted RBP23.13■■□□□ 1.29
RPAIN-203ENST00000381209 SRPK2P78362 688 aaKnown RBP23.13■■□□□ 1.29
RPAIN-203ENST00000381209 USP32Q8NFA0 1604 aa23.12■■□□□ 1.29
RPAIN-203ENST00000381209 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
RPAIN-203ENST00000381209 NSD2O96028 1365 aa23.11■■□□□ 1.29
RPAIN-203ENST00000381209 METP08581 1390 aa23.11■■□□□ 1.29
RPAIN-203ENST00000381209 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
RPAIN-203ENST00000381209 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
RPAIN-203ENST00000381209 TECPR2O15040 1411 aa23.1■■□□□ 1.29
RPAIN-203ENST00000381209 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
RPAIN-203ENST00000381209 PDE3BQ13370 1112 aa23.08■■□□□ 1.28
RPAIN-203ENST00000381209 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.28
RPAIN-203ENST00000381209 MORC1Q86VD1 984 aa23.08■■□□□ 1.28
RPAIN-203ENST00000381209 CDK19Q9BWU1 502 aa23.08■■□□□ 1.28
RPAIN-203ENST00000381209 C3P01024 1663 aa23.07■■□□□ 1.28
RPAIN-203ENST00000381209 ARHGAP23Q9P227 1491 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 EID1Q9Y6B2 187 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
RPAIN-203ENST00000381209 SLIT1O75093 1534 aa23.05■■□□□ 1.28
RPAIN-203ENST00000381209 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
RPAIN-203ENST00000381209 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
RPAIN-203ENST00000381209 PLEKHH1Q9ULM0 1364 aa23.05■■□□□ 1.28
RPAIN-203ENST00000381209 LTKP29376 864 aa23.04■■□□□ 1.28
RPAIN-203ENST00000381209 TXNDC2Q86VQ3 553 aa23.04■■□□□ 1.28
RPAIN-203ENST00000381209 BCANQ96GW7 911 aa23.04■■□□□ 1.28
RPAIN-203ENST00000381209 ERICH6BQ5W0A0 696 aa23.03■■□□□ 1.28
RPAIN-203ENST00000381209 THEMISQ8N1K5 641 aaPredicted RBP23.03■■□□□ 1.28
RPAIN-203ENST00000381209 A0A1W2PP64 1363 aa23.03■■□□□ 1.28
RPAIN-203ENST00000381209 KNDC1Q76NI1 1749 aa23.01■■□□□ 1.27
RPAIN-203ENST00000381209 CPS1P31327 1500 aa23.01■■□□□ 1.27
RPAIN-203ENST00000381209 MED14O60244 1454 aa23.01■■□□□ 1.27
RPAIN-203ENST00000381209 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
RPAIN-203ENST00000381209 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
RPAIN-203ENST00000381209 CD163L1Q9NR16 1453 aa22.99■■□□□ 1.27
RPAIN-203ENST00000381209 CABP1Q9NZU7 370 aa22.97■■□□□ 1.27
RPAIN-203ENST00000381209 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
RPAIN-203ENST00000381209 ATP7BP35670 1465 aa22.95■■□□□ 1.26
RPAIN-203ENST00000381209 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
RPAIN-203ENST00000381209 RNF123Q5XPI4 1314 aa22.94■■□□□ 1.26
RPAIN-203ENST00000381209 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
RPAIN-203ENST00000381209 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
RPAIN-203ENST00000381209 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
RPAIN-203ENST00000381209 NGEFQ8N5V2 710 aa22.92■■□□□ 1.26
RPAIN-203ENST00000381209 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
RPAIN-203ENST00000381209 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
RPAIN-203ENST00000381209 FYB1O15117 783 aa22.91■■□□□ 1.26
RPAIN-203ENST00000381209 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
RPAIN-203ENST00000381209 TNNT2P45379 298 aaPredicted RBP22.89■■□□□ 1.26
RPAIN-203ENST00000381209 MTHFSP49914 203 aa22.89■■□□□ 1.26
RPAIN-203ENST00000381209 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
RPAIN-203ENST00000381209 NUDT16Q96DE0 195 aaKnown RBP22.88■■□□□ 1.25
RPAIN-203ENST00000381209 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
RPAIN-203ENST00000381209 CCDC61Q9Y6R9 512 aa22.88■■□□□ 1.25
RPAIN-203ENST00000381209 CPSF1Q10570 1443 aaKnown RBP22.88■■□□□ 1.25
RPAIN-203ENST00000381209 ZNF521Q96K83 1311 aa22.87■■□□□ 1.25
RPAIN-203ENST00000381209 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
RPAIN-203ENST00000381209 PPIP5K1Q6PFW1 1433 aa22.87■■□□□ 1.25
RPAIN-203ENST00000381209 GGNBP2Q9H3C7 697 aa22.87■■□□□ 1.25
RPAIN-203ENST00000381209 ADGRB2O60241 1585 aa22.86■■□□□ 1.25
RPAIN-203ENST00000381209 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
RPAIN-203ENST00000381209 ADAMTSL3P82987 1691 aa22.86■■□□□ 1.25
RPAIN-203ENST00000381209 AMOTL2Q9Y2J4 779 aa22.85■■□□□ 1.25
RPAIN-203ENST00000381209 RIMS1Q86UR5 1692 aaKnown RBP22.85■■□□□ 1.25
RPAIN-203ENST00000381209 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
RPAIN-203ENST00000381209 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
RPAIN-203ENST00000381209 EDC4Q6P2E9 1401 aaKnown RBP22.84■■□□□ 1.25
RPAIN-203ENST00000381209 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
RPAIN-203ENST00000381209 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
RPAIN-203ENST00000381209 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
RPAIN-203ENST00000381209 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
RPAIN-203ENST00000381209 RCAN3Q9UKA8 241 aa22.82■■□□□ 1.24
RPAIN-203ENST00000381209 APAF1O14727 1248 aa22.81■■□□□ 1.24
RPAIN-203ENST00000381209 CDC42BPGQ6DT37 1551 aa22.8■■□□□ 1.24
RPAIN-203ENST00000381209 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
RPAIN-203ENST00000381209 PRR36Q9H6K5 1346 aa22.79■■□□□ 1.24
RPAIN-203ENST00000381209 RUNDC1Q96C34 613 aa22.79■■□□□ 1.24
RPAIN-203ENST00000381209 ANKRD26Q9UPS8 1709 aa22.78■■□□□ 1.24
RPAIN-203ENST00000381209 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
RPAIN-203ENST00000381209 NCBP3Q53F19 620 aaKnown RBP22.78■■□□□ 1.24
RPAIN-203ENST00000381209 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
RPAIN-203ENST00000381209 PLEKHG3A1L390 1219 aa22.77■■□□□ 1.24
RPAIN-203ENST00000381209 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.77■■□□□ 1.23
RPAIN-203ENST00000381209 ZNF142P52746 1687 aaPredicted RBP22.76■■□□□ 1.23
RPAIN-203ENST00000381209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.76■■□□□ 1.23
RPAIN-203ENST00000381209 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
RPAIN-203ENST00000381209 RRP1P56182 461 aaKnown RBP22.74■■□□□ 1.23
RPAIN-203ENST00000381209 SLFN5Q08AF3 891 aa22.74■■□□□ 1.23
RPAIN-203ENST00000381209 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
RPAIN-203ENST00000381209 TRMT2AQ8IZ69 625 aaKnown RBP22.74■■□□□ 1.23
RPAIN-203ENST00000381209 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-203ENST00000381209 NCKAP5LQ9HCH0 1330 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms