RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 AAMPQ13685 434 aa13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 EXOSC9Q06265 439 aaKnown RBP13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 E9PCH4 1651 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 ADGBQ8N7X0 1667 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 PDE4CQ08493 712 aa13.9□□□□□ -0.18
NPC1L1-202ENST00000381160 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.19
NPC1L1-202ENST00000381160 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-202ENST00000381160 PIK3C2GO75747 1445 aa13.89□□□□□ -0.19
NPC1L1-202ENST00000381160 XPCQ01831 940 aaPredicted RBP13.89□□□□□ -0.19
NPC1L1-202ENST00000381160 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
NPC1L1-202ENST00000381160 PTMSP20962 102 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 ITSN2Q9NZM3 1697 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 SLC12A5Q9H2X9 1139 aa13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
NPC1L1-202ENST00000381160 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
NPC1L1-202ENST00000381160 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
NPC1L1-202ENST00000381160 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
NPC1L1-202ENST00000381160 TRIM27P14373 513 aa13.87□□□□□ -0.19
NPC1L1-202ENST00000381160 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 TMEM57Q8N5G2 664 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 UQCRHP07919 91 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 APBB1O00213 710 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
NPC1L1-202ENST00000381160 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 RNF214Q8ND24 703 aa13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 RAB3GAP1Q15042 981 aa13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 MPNDQ8N594 471 aa13.85□□□□□ -0.19
NPC1L1-202ENST00000381160 ATF7IPQ6VMQ6 1270 aa13.84□□□□□ -0.19
NPC1L1-202ENST00000381160 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
NPC1L1-202ENST00000381160 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.19
NPC1L1-202ENST00000381160 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.19
NPC1L1-202ENST00000381160 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 FGD1P98174 961 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
NPC1L1-202ENST00000381160 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
NPC1L1-202ENST00000381160 OFD1O75665 1012 aa13.82□□□□□ -0.2
NPC1L1-202ENST00000381160 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
NPC1L1-202ENST00000381160 PTPRGP23470 1445 aa13.82□□□□□ -0.2
NPC1L1-202ENST00000381160 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
NPC1L1-202ENST00000381160 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
NPC1L1-202ENST00000381160 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
NPC1L1-202ENST00000381160 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
NPC1L1-202ENST00000381160 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
NPC1L1-202ENST00000381160 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
NPC1L1-202ENST00000381160 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
NPC1L1-202ENST00000381160 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
NPC1L1-202ENST00000381160 SNX21Q969T3 373 aa13.8□□□□□ -0.2
NPC1L1-202ENST00000381160 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 NOL8Q76FK4 1167 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 KLHL40Q2TBA0 621 aa13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 RIPK4P57078 832 aa13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 TBC1D9Q6ZT07 1266 aa13.79□□□□□ -0.2
NPC1L1-202ENST00000381160 NUP160Q12769 1436 aa13.78□□□□□ -0.2
NPC1L1-202ENST00000381160 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
NPC1L1-202ENST00000381160 ABCC2Q92887 1545 aa13.78□□□□□ -0.2
NPC1L1-202ENST00000381160 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
NPC1L1-202ENST00000381160 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
NPC1L1-202ENST00000381160 GRIN2AQ12879 1464 aa13.77□□□□□ -0.2
NPC1L1-202ENST00000381160 MAP7D2Q96T17 732 aa13.77□□□□□ -0.2
NPC1L1-202ENST00000381160 ATP10BO94823 1461 aa13.77□□□□□ -0.21
NPC1L1-202ENST00000381160 SYCE3A1L190 88 aa13.77□□□□□ -0.21
NPC1L1-202ENST00000381160 NUCB1Q02818 461 aa13.77□□□□□ -0.21
NPC1L1-202ENST00000381160 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
NPC1L1-202ENST00000381160 KIF3BO15066 747 aa13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 NUCB2P80303 420 aa13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 RBSNQ9H1K0 784 aa13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 POLR3AO14802 1390 aaPredicted RBP13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
NPC1L1-202ENST00000381160 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 CDC45O75419 566 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
NPC1L1-202ENST00000381160 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms