RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
PDX1-201ENST00000381033 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
PDX1-201ENST00000381033 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
PDX1-201ENST00000381033 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
PDX1-201ENST00000381033 RBM19Q9Y4C8 960 aaKnown RBP22.78■■□□□ 1.24
PDX1-201ENST00000381033 PLIN1O60240 522 aa22.78■■□□□ 1.24
PDX1-201ENST00000381033 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
PDX1-201ENST00000381033 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
PDX1-201ENST00000381033 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
PDX1-201ENST00000381033 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 ZFYVE9O95405 1425 aa22.76■■□□□ 1.23
PDX1-201ENST00000381033 SRPK2P78362 688 aaKnown RBP22.75■■□□□ 1.23
PDX1-201ENST00000381033 APAF1O14727 1248 aa22.74■■□□□ 1.23
PDX1-201ENST00000381033 AGLP35573 1532 aa22.74■■□□□ 1.23
PDX1-201ENST00000381033 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
PDX1-201ENST00000381033 POGKQ9P215 609 aa22.73■■□□□ 1.23
PDX1-201ENST00000381033 INSRP06213 1382 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 WAPLQ7Z5K2 1190 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
PDX1-201ENST00000381033 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
PDX1-201ENST00000381033 PTPRMP28827 1452 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 REREQ9P2R6 1566 aa22.71■■□□□ 1.23
PDX1-201ENST00000381033 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
PDX1-201ENST00000381033 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
PDX1-201ENST00000381033 ZNF521Q96K83 1311 aa22.68■■□□□ 1.22
PDX1-201ENST00000381033 MTHFSP49914 203 aa22.68■■□□□ 1.22
PDX1-201ENST00000381033 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
PDX1-201ENST00000381033 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 ARHGEF40Q8TER5 1519 aa22.67■■□□□ 1.22
PDX1-201ENST00000381033 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
PDX1-201ENST00000381033 CGNL1Q0VF96 1302 aa22.66■■□□□ 1.22
PDX1-201ENST00000381033 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 ANKRD36BQ8N2N9 1353 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 GGNBP2Q9H3C7 697 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
PDX1-201ENST00000381033 NEUROD2Q15784 382 aa22.64■■□□□ 1.22
PDX1-201ENST00000381033 GOLGA2Q08379 1002 aa22.64■■□□□ 1.21
PDX1-201ENST00000381033 CDK19Q9BWU1 502 aa22.64■■□□□ 1.21
PDX1-201ENST00000381033 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
PDX1-201ENST00000381033 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
PDX1-201ENST00000381033 POLR3AO14802 1390 aaPredicted RBP22.62■■□□□ 1.21
PDX1-201ENST00000381033 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
PDX1-201ENST00000381033 CABP1Q9NZU7 370 aa22.61■■□□□ 1.21
PDX1-201ENST00000381033 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
PDX1-201ENST00000381033 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
PDX1-201ENST00000381033 METP08581 1390 aa22.58■■□□□ 1.21
PDX1-201ENST00000381033 FBLN1P23142 703 aa22.58■■□□□ 1.21
PDX1-201ENST00000381033 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.2
PDX1-201ENST00000381033 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
PDX1-201ENST00000381033 FYB1O15117 783 aa22.56■■□□□ 1.2
PDX1-201ENST00000381033 NCKAP5LQ9HCH0 1330 aa22.56■■□□□ 1.2
PDX1-201ENST00000381033 ABCC11Q96J66 1382 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDX1-201ENST00000381033 ARXQ96QS3 562 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
PDX1-201ENST00000381033 USP32Q8NFA0 1604 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 TRMT2AQ8IZ69 625 aaKnown RBP22.52■■□□□ 1.2
PDX1-201ENST00000381033 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
PDX1-201ENST00000381033 SETD1AO15047 1707 aaKnown RBP22.52■■□□□ 1.2
PDX1-201ENST00000381033 NRXN3Q9Y4C0 1643 aa22.52■■□□□ 1.19
PDX1-201ENST00000381033 SKAP1Q86WV1 359 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 TERF2IPQ9NYB0 399 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 TNRQ92752 1358 aa22.51■■□□□ 1.19
PDX1-201ENST00000381033 BCAR3O75815 825 aa22.5■■□□□ 1.19
PDX1-201ENST00000381033 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
PDX1-201ENST00000381033 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDX1-201ENST00000381033 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 PDIA4P13667 645 aaKnown RBP22.48■■□□□ 1.19
PDX1-201ENST00000381033 LTKP29376 864 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
PDX1-201ENST00000381033 NLRP1Q9C000 1473 aa22.46■■□□□ 1.19
PDX1-201ENST00000381033 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
PDX1-201ENST00000381033 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
PDX1-201ENST00000381033 NSD2O96028 1365 aa22.46■■□□□ 1.19
PDX1-201ENST00000381033 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
PDX1-201ENST00000381033 NINLQ9Y2I6 1382 aa22.45■■□□□ 1.18
PDX1-201ENST00000381033 E9PSI1 815 aa22.45■■□□□ 1.18
PDX1-201ENST00000381033 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
PDX1-201ENST00000381033 ZRANB1Q9UGI0 708 aa22.44■■□□□ 1.18
PDX1-201ENST00000381033 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 PPM1GO15355 546 aaPredicted RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 PDE4CQ08493 712 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 TMEM2Q9UHN6 1383 aa22.43■■□□□ 1.18
PDX1-201ENST00000381033 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 NKTRP30414 1462 aaKnown RBP22.43■■□□□ 1.18
PDX1-201ENST00000381033 MSH5O43196 834 aa22.42■■□□□ 1.18
PDX1-201ENST00000381033 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
PDX1-201ENST00000381033 DLC1Q96QB1 1528 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 IQSEC2Q5JU85 1478 aa22.4■■□□□ 1.18
PDX1-201ENST00000381033 NME9Q86XW9 330 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms