RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MARF1Q9Y4F3 1742 aaKnown RBP26.59■■□□□ 1.85
HMGN1-203ENST00000380748 KIF1BO60333 1816 aa26.58■■□□□ 1.84
HMGN1-203ENST00000380748 PRAG1Q86YV5 1406 aa26.57■■□□□ 1.84
HMGN1-203ENST00000380748 PXDNQ92626 1479 aa26.56■■□□□ 1.84
HMGN1-203ENST00000380748 GJD4Q96KN9 370 aaPredicted RBP26.55■■□□□ 1.84
HMGN1-203ENST00000380748 NPHP3Q7Z494 1330 aa26.54■■□□□ 1.84
HMGN1-203ENST00000380748 HFM1A2PYH4 1435 aa26.54■■□□□ 1.84
HMGN1-203ENST00000380748 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
HMGN1-203ENST00000380748 ESCO1Q5FWF5 840 aa26.52■■□□□ 1.84
HMGN1-203ENST00000380748 CDC42BPGQ6DT37 1551 aa26.51■■□□□ 1.83
HMGN1-203ENST00000380748 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.83
HMGN1-203ENST00000380748 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.51■■□□□ 1.83
HMGN1-203ENST00000380748 GLI3P10071 1580 aa26.5■■□□□ 1.83
HMGN1-203ENST00000380748 BLMP54132 1417 aaPredicted RBP26.49■■□□□ 1.83
HMGN1-203ENST00000380748 FOXO3O43524 673 aa26.49■■□□□ 1.83
HMGN1-203ENST00000380748 RALGAPBQ86X10 1494 aa26.49■■□□□ 1.83
HMGN1-203ENST00000380748 DEFB132Q7Z7B7 95 aa26.46■■□□□ 1.83
HMGN1-203ENST00000380748 SLIT2O94813 1529 aa26.44■■□□□ 1.82
HMGN1-203ENST00000380748 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
HMGN1-203ENST00000380748 UNC5CLQ8IV45 518 aa26.44■■□□□ 1.82
HMGN1-203ENST00000380748 PPLO60437 1756 aa26.43■■□□□ 1.82
HMGN1-203ENST00000380748 NAIPQ13075 1403 aa26.42■■□□□ 1.82
HMGN1-203ENST00000380748 NUTM2FA1L443 756 aa26.42■■□□□ 1.82
HMGN1-203ENST00000380748 RPGRIP1LQ68CZ1 1315 aa26.4■■□□□ 1.82
HMGN1-203ENST00000380748 LRPPRCP42704 1394 aaKnown RBP26.4■■□□□ 1.82
HMGN1-203ENST00000380748 LRP5O75197 1615 aa26.39■■□□□ 1.82
HMGN1-203ENST00000380748 USP32Q8NFA0 1604 aa26.38■■□□□ 1.81
HMGN1-203ENST00000380748 SPATA31A3Q5VYP0 1347 aa26.36■■□□□ 1.81
HMGN1-203ENST00000380748 SF3B2Q13435 895 aaKnown RBP26.35■■□□□ 1.81
HMGN1-203ENST00000380748 WAPLQ7Z5K2 1190 aa26.35■■□□□ 1.81
HMGN1-203ENST00000380748 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
HMGN1-203ENST00000380748 SEPT12Q8IYM1 358 aa26.35■■□□□ 1.81
HMGN1-203ENST00000380748 STK26Q9P289 416 aa26.33■■□□□ 1.81
HMGN1-203ENST00000380748 TECPR2O15040 1411 aa26.32■■□□□ 1.8
HMGN1-203ENST00000380748 PLEKHH1Q9ULM0 1364 aa26.32■■□□□ 1.8
HMGN1-203ENST00000380748 CCDC144AA2RUR9 1427 aa26.31■■□□□ 1.8
HMGN1-203ENST00000380748 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
HMGN1-203ENST00000380748 KIF1AQ12756 1690 aa26.31■■□□□ 1.8
HMGN1-203ENST00000380748 ADGRF5Q8IZF2 1346 aa26.3■■□□□ 1.8
HMGN1-203ENST00000380748 PLCH1Q4KWH8 1693 aa26.29■■□□□ 1.8
HMGN1-203ENST00000380748 VPS72Q15906 364 aa26.29■■□□□ 1.8
HMGN1-203ENST00000380748 PSDA5PKW4 1024 aaPredicted RBP26.28■■□□□ 1.8
HMGN1-203ENST00000380748 KRT28Q7Z3Y7 464 aa26.28■■□□□ 1.8
HMGN1-203ENST00000380748 KRT27Q7Z3Y8 459 aa26.27■■□□□ 1.8
HMGN1-203ENST00000380748 CABLES1Q8TDN4 633 aa26.27■■□□□ 1.8
HMGN1-203ENST00000380748 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
HMGN1-203ENST00000380748 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
HMGN1-203ENST00000380748 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
HMGN1-203ENST00000380748 HAP1P54257 671 aaPredicted RBP26.26■■□□□ 1.79
HMGN1-203ENST00000380748 NWD2Q9ULI1 1742 aa26.25■■□□□ 1.79
HMGN1-203ENST00000380748 TNS3Q68CZ2 1445 aa26.25■■□□□ 1.79
HMGN1-203ENST00000380748 ONECUT3O60422 494 aaPredicted RBP26.25■■□□□ 1.79
HMGN1-203ENST00000380748 CCDC9Q9Y3X0 531 aaKnown RBP26.25■■□□□ 1.79
HMGN1-203ENST00000380748 ABCC11Q96J66 1382 aa26.24■■□□□ 1.79
HMGN1-203ENST00000380748 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
HMGN1-203ENST00000380748 ABCA3Q99758 1704 aa26.23■■□□□ 1.79
HMGN1-203ENST00000380748 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
HMGN1-203ENST00000380748 HRCP23327 699 aa26.22■■□□□ 1.79
HMGN1-203ENST00000380748 RGPD8O14715 1765 aaPredicted RBP26.21■■□□□ 1.79
HMGN1-203ENST00000380748 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
HMGN1-203ENST00000380748 BAG6P46379 1132 aa26.19■■□□□ 1.78
HMGN1-203ENST00000380748 A0A0G2JS52 829 aa26.18■■□□□ 1.78
HMGN1-203ENST00000380748 MYT1Q01538 1121 aa26.18■■□□□ 1.78
HMGN1-203ENST00000380748 RGL3Q3MIN7 710 aa26.18■■□□□ 1.78
HMGN1-203ENST00000380748 PHF8Q9UPP1 1060 aa26.18■■□□□ 1.78
HMGN1-203ENST00000380748 YTHDC2Q9H6S0 1430 aaKnown RBP26.16■■□□□ 1.78
HMGN1-203ENST00000380748 FAM83GA6ND36 823 aa26.16■■□□□ 1.78
HMGN1-203ENST00000380748 PSME1Q06323 249 aa26.16■■□□□ 1.78
HMGN1-203ENST00000380748 LMOD2Q6P5Q4 547 aa26.16■■□□□ 1.78
HMGN1-203ENST00000380748 SPATA31E1Q6ZUB1 1445 aa26.15■■□□□ 1.78
HMGN1-203ENST00000380748 SBNO1A3KN83 1393 aa26.15■■□□□ 1.78
HMGN1-203ENST00000380748 ANKRD30BQ9BXX2 1392 aa26.15■■□□□ 1.78
HMGN1-203ENST00000380748 PIK3C2GO75747 1445 aa26.14■■□□□ 1.78
HMGN1-203ENST00000380748 NRAPQ86VF7 1730 aa26.14■■□□□ 1.78
HMGN1-203ENST00000380748 FAM98CQ17RN3 349 aaKnown RBP26.14■■□□□ 1.78
HMGN1-203ENST00000380748 NRXN1Q9ULB1 1477 aa26.14■■□□□ 1.78
HMGN1-203ENST00000380748 ARHGEF10O15013 1369 aa26.13■■□□□ 1.77
HMGN1-203ENST00000380748 EN1Q05925 392 aaPredicted RBP26.12■■□□□ 1.77
HMGN1-203ENST00000380748 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
HMGN1-203ENST00000380748 R3HDM1Q15032 1099 aaKnown RBP26.09■■□□□ 1.77
HMGN1-203ENST00000380748 FAM182BQ5T319 152 aa26.09■■□□□ 1.77
HMGN1-203ENST00000380748 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
HMGN1-203ENST00000380748 BTG4Q9NY30 223 aa26.07■■□□□ 1.76
HMGN1-203ENST00000380748 TNS1Q9HBL0 1735 aaKnown RBP26.05■■□□□ 1.76
HMGN1-203ENST00000380748 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
HMGN1-203ENST00000380748 PMFBP1Q8TBY8 1022 aa26.04■■□□□ 1.76
HMGN1-203ENST00000380748 TRPM3Q9HCF6 1732 aaPredicted RBP26.03■■□□□ 1.76
HMGN1-203ENST00000380748 COL14A1Q05707 1796 aaKnown RBP26.03■■□□□ 1.76
HMGN1-203ENST00000380748 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
HMGN1-203ENST00000380748 PRAM1Q96QH2 718 aa26.01■■□□□ 1.75
HMGN1-203ENST00000380748 THSD7AQ9UPZ6 1657 aa26.01■■□□□ 1.75
HMGN1-203ENST00000380748 SPATA31A5Q5VU36 1347 aa26■■□□□ 1.75
HMGN1-203ENST00000380748 SPATA31A7Q8IWB4 1347 aa26■■□□□ 1.75
HMGN1-203ENST00000380748 C14orf93Q9H972 538 aaKnown RBP26■■□□□ 1.75
HMGN1-203ENST00000380748 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
HMGN1-203ENST00000380748 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
HMGN1-203ENST00000380748 EZH2Q15910 746 aaKnown RBP25.99■■□□□ 1.75
HMGN1-203ENST00000380748 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
HMGN1-203ENST00000380748 CFAP70Q5T0N1 1121 aa25.98■■□□□ 1.75
HMGN1-203ENST00000380748 ADGRB2O60241 1585 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms