RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
PRPF40B-202ENST00000380281 DUOX2Q9NRD8 1548 aa15.81■□□□□ 0.12
PRPF40B-202ENST00000380281 CFAP53Q96M91 514 aa15.8■□□□□ 0.12
PRPF40B-202ENST00000380281 ATP10AO60312 1499 aa15.8■□□□□ 0.12
PRPF40B-202ENST00000380281 EXOSC9Q06265 439 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-202ENST00000380281 MINK1Q8N4C8 1332 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-202ENST00000380281 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
PRPF40B-202ENST00000380281 BECN1Q14457 450 aa15.79■□□□□ 0.12
PRPF40B-202ENST00000380281 USP19O94966 1318 aa15.79■□□□□ 0.12
PRPF40B-202ENST00000380281 NOS1P29475 1434 aa15.78■□□□□ 0.12
PRPF40B-202ENST00000380281 GOLGA6L3A6NEY3 463 aa15.78■□□□□ 0.12
PRPF40B-202ENST00000380281 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
PRPF40B-202ENST00000380281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.78■□□□□ 0.12
PRPF40B-202ENST00000380281 MAST1Q9Y2H9 1570 aa15.77■□□□□ 0.11
PRPF40B-202ENST00000380281 RAPGEF3O95398 923 aa15.76■□□□□ 0.11
PRPF40B-202ENST00000380281 RBM10P98175 930 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-202ENST00000380281 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-202ENST00000380281 C1orf115Q9H7X2 142 aa15.75■□□□□ 0.11
PRPF40B-202ENST00000380281 PIK3C2GO75747 1445 aa15.75■□□□□ 0.11
PRPF40B-202ENST00000380281 RWDD1Q9H446 243 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-202ENST00000380281 DZIP1LQ8IYY4 767 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 TBC1D2Q9BYX2 928 aa15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 ERVK-7P63135 1459 aa15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
PRPF40B-202ENST00000380281 EIF2AK4Q9P2K8 1649 aaKnown RBP15.73■□□□□ 0.11
PRPF40B-202ENST00000380281 HMOX1P09601 288 aa15.73■□□□□ 0.11
PRPF40B-202ENST00000380281 ZKSCAN2Q63HK3 967 aa15.73■□□□□ 0.11
PRPF40B-202ENST00000380281 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
PRPF40B-202ENST00000380281 UNC13BO14795 1591 aa15.72■□□□□ 0.11
PRPF40B-202ENST00000380281 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
PRPF40B-202ENST00000380281 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
PRPF40B-202ENST00000380281 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRPF40B-202ENST00000380281 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-202ENST00000380281 RIPK4P57078 832 aa15.71■□□□□ 0.11
PRPF40B-202ENST00000380281 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
PRPF40B-202ENST00000380281 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.1
PRPF40B-202ENST00000380281 INSRP06213 1382 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 APBB1O00213 710 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 TRIM27P14373 513 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 FANCAO15360 1455 aa15.7■□□□□ 0.1
PRPF40B-202ENST00000380281 MADDQ8WXG6 1647 aa15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 ESPNB1AK53 854 aa15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 SOX12O15370 315 aa15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 CHD1O14646 1710 aa15.69■□□□□ 0.1
PRPF40B-202ENST00000380281 C22orf23Q9BZE7 217 aa15.68■□□□□ 0.1
PRPF40B-202ENST00000380281 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
PRPF40B-202ENST00000380281 ARID3AQ99856 593 aa15.67■□□□□ 0.1
PRPF40B-202ENST00000380281 ADGRL1O94910 1474 aa15.67■□□□□ 0.1
PRPF40B-202ENST00000380281 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-202ENST00000380281 MLECQ14165 292 aa15.67■□□□□ 0.1
PRPF40B-202ENST00000380281 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
PRPF40B-202ENST00000380281 NUTM2FA1L443 756 aa15.66■□□□□ 0.1
PRPF40B-202ENST00000380281 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
PRPF40B-202ENST00000380281 PRAM1Q96QH2 718 aa15.66■□□□□ 0.1
PRPF40B-202ENST00000380281 PDCL3Q9H2J4 239 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 PTPRTO14522 1441 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 TBC1D32Q96NH3 1257 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 ANTXR1Q9H6X2 564 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 PRDM4Q9UKN5 801 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 POLR3AO14802 1390 aaPredicted RBP15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
PRPF40B-202ENST00000380281 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
PRPF40B-202ENST00000380281 IDI1Q13907 227 aa15.64■□□□□ 0.09
PRPF40B-202ENST00000380281 AAMPQ13685 434 aa15.63■□□□□ 0.09
PRPF40B-202ENST00000380281 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
PRPF40B-202ENST00000380281 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
PRPF40B-202ENST00000380281 ABCC1P33527 1531 aa15.63■□□□□ 0.09
PRPF40B-202ENST00000380281 SYNMO15061 1565 aa15.63■□□□□ 0.09
PRPF40B-202ENST00000380281 TRIM44Q96DX7 344 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 MCM4P33991 863 aa15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 FBXO31Q5XUX0 539 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 TRPM2O94759 1503 aa15.62■□□□□ 0.09
PRPF40B-202ENST00000380281 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 TRAK2O60296 914 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
PRPF40B-202ENST00000380281 MRE11P49959 708 aa15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 KDM5AP29375 1690 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 FYB1O15117 783 aa15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 DIAPH1O60610 1272 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 HSCBQ8IWL3 235 aa15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-202ENST00000380281 CALD1Q05682 793 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-202ENST00000380281 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms