RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 YTHDC2Q9H6S0 1430 aaKnown RBP28.35■■■□□ 2.13
CNTFR-202ENST00000378980 SHPRHQ149N8 1683 aa28.34■■■□□ 2.13
CNTFR-202ENST00000378980 MORC1Q86VD1 984 aa28.34■■■□□ 2.13
CNTFR-202ENST00000378980 STK26Q9P289 416 aa28.34■■■□□ 2.13
CNTFR-202ENST00000378980 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
CNTFR-202ENST00000378980 CGNL1Q0VF96 1302 aa28.33■■■□□ 2.13
CNTFR-202ENST00000378980 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
CNTFR-202ENST00000378980 NINLQ9Y2I6 1382 aa28.31■■■□□ 2.12
CNTFR-202ENST00000378980 SAFB2Q14151 953 aaKnown RBP eCLIP28.31■■■□□ 2.12
CNTFR-202ENST00000378980 CCDC146Q8IYE0 955 aa28.31■■■□□ 2.12
CNTFR-202ENST00000378980 CABP2Q9NPB3 220 aa28.31■■■□□ 2.12
CNTFR-202ENST00000378980 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
CNTFR-202ENST00000378980 NSD2O96028 1365 aa28.29■■■□□ 2.12
CNTFR-202ENST00000378980 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
CNTFR-202ENST00000378980 DUSP27Q5VZP5 1158 aa28.29■■■□□ 2.12
CNTFR-202ENST00000378980 EXOC6Q8TAG9 804 aa28.28■■■□□ 2.12
CNTFR-202ENST00000378980 SETD1AO15047 1707 aaKnown RBP28.27■■■□□ 2.12
CNTFR-202ENST00000378980 MLECQ14165 292 aa28.27■■■□□ 2.12
CNTFR-202ENST00000378980 PRAM1Q96QH2 718 aa28.26■■■□□ 2.11
CNTFR-202ENST00000378980 APAF1O14727 1248 aa28.25■■■□□ 2.11
CNTFR-202ENST00000378980 RIMS2Q9UQ26 1411 aa28.25■■■□□ 2.11
CNTFR-202ENST00000378980 ATAD2Q6PL18 1390 aa28.24■■■□□ 2.11
CNTFR-202ENST00000378980 NGEFQ8N5V2 710 aa28.23■■■□□ 2.11
CNTFR-202ENST00000378980 TNNT2P45379 298 aaPredicted RBP28.23■■■□□ 2.11
CNTFR-202ENST00000378980 SRPK2P78362 688 aaKnown RBP28.23■■■□□ 2.11
CNTFR-202ENST00000378980 SLFN5Q08AF3 891 aa28.23■■■□□ 2.11
CNTFR-202ENST00000378980 A0A1W2PP64 1363 aa28.23■■■□□ 2.11
CNTFR-202ENST00000378980 POGKQ9P215 609 aa28.22■■■□□ 2.11
CNTFR-202ENST00000378980 DLC1Q96QB1 1528 aa28.22■■■□□ 2.11
CNTFR-202ENST00000378980 MINK1Q8N4C8 1332 aaPredicted RBP28.22■■■□□ 2.11
CNTFR-202ENST00000378980 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
CNTFR-202ENST00000378980 TRMT2AQ8IZ69 625 aaKnown RBP28.2■■■□□ 2.11
CNTFR-202ENST00000378980 PLIN1O60240 522 aa28.2■■■□□ 2.1
CNTFR-202ENST00000378980 ANKRD26Q9UPS8 1709 aa28.19■■■□□ 2.1
CNTFR-202ENST00000378980 ZMYM3Q14202 1370 aa28.18■■■□□ 2.1
CNTFR-202ENST00000378980 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
CNTFR-202ENST00000378980 NRXN3Q9Y4C0 1643 aa28.17■■■□□ 2.1
CNTFR-202ENST00000378980 MTHFSP49914 203 aa28.17■■■□□ 2.1
CNTFR-202ENST00000378980 FANCIQ9NVI1 1328 aa28.14■■■□□ 2.1
CNTFR-202ENST00000378980 CFAP53Q96M91 514 aa28.14■■■□□ 2.1
CNTFR-202ENST00000378980 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.1
CNTFR-202ENST00000378980 IQSEC2Q5JU85 1478 aa28.14■■■□□ 2.1
CNTFR-202ENST00000378980 ESF1Q9H501 851 aaKnown RBP28.14■■■□□ 2.09
CNTFR-202ENST00000378980 SPINK5Q9NQ38 1064 aaPredicted RBP28.13■■■□□ 2.09
CNTFR-202ENST00000378980 E9PSI1 815 aa28.12■■■□□ 2.09
CNTFR-202ENST00000378980 TERF2IPQ9NYB0 399 aa28.12■■■□□ 2.09
CNTFR-202ENST00000378980 MED14O60244 1454 aa28.12■■■□□ 2.09
CNTFR-202ENST00000378980 CRBNQ96SW2 442 aa28.11■■■□□ 2.09
CNTFR-202ENST00000378980 RUNDC1Q96C34 613 aa28.11■■■□□ 2.09
CNTFR-202ENST00000378980 CDK19Q9BWU1 502 aa28.11■■■□□ 2.09
CNTFR-202ENST00000378980 NLRP1Q9C000 1473 aa28.1■■■□□ 2.09
CNTFR-202ENST00000378980 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.09■■■□□ 2.09
CNTFR-202ENST00000378980 KIF20BQ96Q89 1820 aa28.08■■■□□ 2.09
CNTFR-202ENST00000378980 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
CNTFR-202ENST00000378980 WWC1Q8IX03 1113 aa28.07■■■□□ 2.08
CNTFR-202ENST00000378980 C20orf194Q5TEA3 1177 aa28.06■■■□□ 2.08
CNTFR-202ENST00000378980 TNRQ92752 1358 aa28.06■■■□□ 2.08
CNTFR-202ENST00000378980 KNDC1Q76NI1 1749 aa28.05■■■□□ 2.08
CNTFR-202ENST00000378980 UBR1Q8IWV7 1749 aa28.04■■■□□ 2.08
CNTFR-202ENST00000378980 HDGFL2Q7Z4V5 671 aaPredicted RBP28.04■■■□□ 2.08
CNTFR-202ENST00000378980 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.04■■■□□ 2.08
CNTFR-202ENST00000378980 GGNBP2Q9H3C7 697 aa28.04■■■□□ 2.08
CNTFR-202ENST00000378980 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
CNTFR-202ENST00000378980 FYB1O15117 783 aa28.03■■■□□ 2.08
CNTFR-202ENST00000378980 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
CNTFR-202ENST00000378980 ATP7BP35670 1465 aa28.02■■■□□ 2.08
CNTFR-202ENST00000378980 TCP11L2Q8N4U5 519 aa28.02■■■□□ 2.08
CNTFR-202ENST00000378980 PHF23Q9BUL5 403 aaPredicted RBP28.02■■■□□ 2.08
CNTFR-202ENST00000378980 METP08581 1390 aa28.02■■■□□ 2.08
CNTFR-202ENST00000378980 ADGRB2O60241 1585 aa28.01■■■□□ 2.08
CNTFR-202ENST00000378980 CABP1Q9NZU7 370 aa28.01■■■□□ 2.07
CNTFR-202ENST00000378980 HDGFP51858 240 aaKnown RBP27.98■■■□□ 2.07
CNTFR-202ENST00000378980 RRP7AQ9Y3A4 280 aaKnown RBP27.98■■■□□ 2.07
CNTFR-202ENST00000378980 TECPR2O15040 1411 aa27.97■■■□□ 2.07
CNTFR-202ENST00000378980 CCDC27Q2M243 656 aa27.97■■■□□ 2.07
CNTFR-202ENST00000378980 NCBP3Q53F19 620 aaKnown RBP27.97■■■□□ 2.07
CNTFR-202ENST00000378980 U2AF1L5P0DN76 240 aaPredicted RBP27.96■■■□□ 2.07
CNTFR-202ENST00000378980 U2AF1Q01081 240 aaKnown RBP eCLIP27.96■■■□□ 2.07
CNTFR-202ENST00000378980 CPS1P31327 1500 aa27.96■■■□□ 2.07
CNTFR-202ENST00000378980 TMEM2Q9UHN6 1383 aa27.96■■■□□ 2.07
CNTFR-202ENST00000378980 NEUROD2Q15784 382 aa27.96■■■□□ 2.07
CNTFR-202ENST00000378980 FAM135BQ49AJ0 1406 aa27.95■■■□□ 2.06
CNTFR-202ENST00000378980 MSH5O43196 834 aa27.95■■■□□ 2.06
CNTFR-202ENST00000378980 WDR63Q8IWG1 891 aa27.95■■■□□ 2.06
CNTFR-202ENST00000378980 TCERG1O14776 1098 aaKnown RBP27.92■■■□□ 2.06
CNTFR-202ENST00000378980 BCAR3O75815 825 aa27.92■■■□□ 2.06
CNTFR-202ENST00000378980 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
CNTFR-202ENST00000378980 WASLO00401 505 aaPredicted RBP27.91■■■□□ 2.06
CNTFR-202ENST00000378980 ANP32EQ9BTT0 268 aa27.91■■■□□ 2.06
CNTFR-202ENST00000378980 TXNDC2Q86VQ3 553 aa27.9■■■□□ 2.06
CNTFR-202ENST00000378980 PNPLA6Q8IY17 1366 aa27.9■■■□□ 2.06
CNTFR-202ENST00000378980 CPSF1Q10570 1443 aaKnown RBP27.89■■■□□ 2.06
CNTFR-202ENST00000378980 PPIP5K1Q6PFW1 1433 aa27.88■■■□□ 2.05
CNTFR-202ENST00000378980 KDM2BQ8NHM5 1336 aa27.87■■■□□ 2.05
CNTFR-202ENST00000378980 PLEKHF1Q96S99 279 aa27.87■■■□□ 2.05
CNTFR-202ENST00000378980 ADAMTS13Q76LX8 1427 aa27.86■■■□□ 2.05
CNTFR-202ENST00000378980 CDC42BPGQ6DT37 1551 aa27.86■■■□□ 2.05
CNTFR-202ENST00000378980 U2SURPO15042 1029 aaKnown RBP27.86■■■□□ 2.05
CNTFR-202ENST00000378980 EDC4Q6P2E9 1401 aaKnown RBP27.86■■■□□ 2.05
CNTFR-202ENST00000378980 MON2Q7Z3U7 1717 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms