RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
THUMPD2-201ENST00000378727 PLEKHG1Q9ULL1 1385 aa23.56■■□□□ 1.36
THUMPD2-201ENST00000378727 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
THUMPD2-201ENST00000378727 MINK1Q8N4C8 1332 aaPredicted RBP23.55■■□□□ 1.36
THUMPD2-201ENST00000378727 CABP2Q9NPB3 220 aa23.55■■□□□ 1.36
THUMPD2-201ENST00000378727 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
THUMPD2-201ENST00000378727 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
THUMPD2-201ENST00000378727 PLEKHH1Q9ULM0 1364 aa23.53■■□□□ 1.36
THUMPD2-201ENST00000378727 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.35
THUMPD2-201ENST00000378727 BCANQ96GW7 911 aa23.52■■□□□ 1.35
THUMPD2-201ENST00000378727 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
THUMPD2-201ENST00000378727 TECPR2O15040 1411 aa23.51■■□□□ 1.35
THUMPD2-201ENST00000378727 MED14O60244 1454 aa23.5■■□□□ 1.35
THUMPD2-201ENST00000378727 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
THUMPD2-201ENST00000378727 EID1Q9Y6B2 187 aa23.5■■□□□ 1.35
THUMPD2-201ENST00000378727 CPS1P31327 1500 aa23.49■■□□□ 1.35
THUMPD2-201ENST00000378727 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
THUMPD2-201ENST00000378727 NSD3Q9BZ95 1437 aa23.48■■□□□ 1.35
THUMPD2-201ENST00000378727 FAM135BQ49AJ0 1406 aa23.46■■□□□ 1.35
THUMPD2-201ENST00000378727 PPP2R1AP30153 589 aa23.46■■□□□ 1.35
THUMPD2-201ENST00000378727 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
THUMPD2-201ENST00000378727 USP32Q8NFA0 1604 aa23.45■■□□□ 1.35
THUMPD2-201ENST00000378727 SIRT1Q96EB6 747 aa23.45■■□□□ 1.35
THUMPD2-201ENST00000378727 CDK19Q9BWU1 502 aa23.45■■□□□ 1.35
THUMPD2-201ENST00000378727 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
THUMPD2-201ENST00000378727 NINLQ9Y2I6 1382 aa23.45■■□□□ 1.34
THUMPD2-201ENST00000378727 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
THUMPD2-201ENST00000378727 SLC26A8Q96RN1 970 aa23.43■■□□□ 1.34
THUMPD2-201ENST00000378727 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
THUMPD2-201ENST00000378727 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
THUMPD2-201ENST00000378727 PTPRUQ92729 1446 aa23.41■■□□□ 1.34
THUMPD2-201ENST00000378727 SETD1BQ9UPS6 1966 aaKnown RBP23.41■■□□□ 1.34
THUMPD2-201ENST00000378727 CD163L1Q9NR16 1453 aa23.4■■□□□ 1.34
THUMPD2-201ENST00000378727 A0A1W2PP64 1363 aa23.39■■□□□ 1.34
THUMPD2-201ENST00000378727 TBX22Q9Y458 520 aa23.39■■□□□ 1.33
THUMPD2-201ENST00000378727 DIP2AQ14689 1571 aa23.38■■□□□ 1.33
THUMPD2-201ENST00000378727 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
THUMPD2-201ENST00000378727 CGNL1Q0VF96 1302 aa23.36■■□□□ 1.33
THUMPD2-201ENST00000378727 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.35■■□□□ 1.33
THUMPD2-201ENST00000378727 CABP1Q9NZU7 370 aa23.34■■□□□ 1.33
THUMPD2-201ENST00000378727 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
THUMPD2-201ENST00000378727 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
THUMPD2-201ENST00000378727 AMOTL2Q9Y2J4 779 aa23.32■■□□□ 1.32
THUMPD2-201ENST00000378727 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
THUMPD2-201ENST00000378727 NSD2O96028 1365 aa23.31■■□□□ 1.32
THUMPD2-201ENST00000378727 INSRP06213 1382 aa23.31■■□□□ 1.32
THUMPD2-201ENST00000378727 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
THUMPD2-201ENST00000378727 ATP7BP35670 1465 aa23.3■■□□□ 1.32
THUMPD2-201ENST00000378727 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
THUMPD2-201ENST00000378727 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
THUMPD2-201ENST00000378727 PTCH1Q13635 1447 aa23.29■■□□□ 1.32
THUMPD2-201ENST00000378727 ANKLE2Q86XL3 938 aa23.28■■□□□ 1.32
THUMPD2-201ENST00000378727 HDGFL2Q7Z4V5 671 aaPredicted RBP23.28■■□□□ 1.32
THUMPD2-201ENST00000378727 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
THUMPD2-201ENST00000378727 NUDT16Q96DE0 195 aaKnown RBP23.26■■□□□ 1.31
THUMPD2-201ENST00000378727 ADAMTS8Q9UP79 889 aa23.26■■□□□ 1.31
THUMPD2-201ENST00000378727 ANKRD26Q9UPS8 1709 aa23.25■■□□□ 1.31
THUMPD2-201ENST00000378727 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
THUMPD2-201ENST00000378727 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
THUMPD2-201ENST00000378727 PRR36Q9H6K5 1346 aa23.24■■□□□ 1.31
THUMPD2-201ENST00000378727 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
THUMPD2-201ENST00000378727 NCKAP5LQ9HCH0 1330 aa23.24■■□□□ 1.31
THUMPD2-201ENST00000378727 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
THUMPD2-201ENST00000378727 FYB1O15117 783 aa23.23■■□□□ 1.31
THUMPD2-201ENST00000378727 KIF20BQ96Q89 1820 aa23.23■■□□□ 1.31
THUMPD2-201ENST00000378727 CCDC61Q9Y6R9 512 aa23.23■■□□□ 1.31
THUMPD2-201ENST00000378727 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
THUMPD2-201ENST00000378727 GGNBP2Q9H3C7 697 aa23.22■■□□□ 1.31
THUMPD2-201ENST00000378727 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
THUMPD2-201ENST00000378727 TOPAZ1Q8N9V7 1692 aa23.21■■□□□ 1.31
THUMPD2-201ENST00000378727 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
THUMPD2-201ENST00000378727 KCNA6P17658 529 aa23.2■■□□□ 1.3
THUMPD2-201ENST00000378727 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
THUMPD2-201ENST00000378727 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
THUMPD2-201ENST00000378727 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
THUMPD2-201ENST00000378727 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
THUMPD2-201ENST00000378727 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
THUMPD2-201ENST00000378727 MTHFSP49914 203 aa23.17■■□□□ 1.3
THUMPD2-201ENST00000378727 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
THUMPD2-201ENST00000378727 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
THUMPD2-201ENST00000378727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.15■■□□□ 1.3
THUMPD2-201ENST00000378727 SALL2Q9Y467 1007 aaPredicted RBP23.15■■□□□ 1.3
THUMPD2-201ENST00000378727 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
THUMPD2-201ENST00000378727 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
THUMPD2-201ENST00000378727 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
THUMPD2-201ENST00000378727 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
THUMPD2-201ENST00000378727 PLEKHG3A1L390 1219 aa23.11■■□□□ 1.29
THUMPD2-201ENST00000378727 RGPD8O14715 1765 aaPredicted RBP23.11■■□□□ 1.29
THUMPD2-201ENST00000378727 FKBP8Q14318 412 aa23.09■■□□□ 1.29
THUMPD2-201ENST00000378727 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
THUMPD2-201ENST00000378727 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
THUMPD2-201ENST00000378727 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
THUMPD2-201ENST00000378727 NME9Q86XW9 330 aa23.08■■□□□ 1.29
THUMPD2-201ENST00000378727 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
THUMPD2-201ENST00000378727 ACEP12821 1306 aa23.08■■□□□ 1.28
THUMPD2-201ENST00000378727 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.28
THUMPD2-201ENST00000378727 FMN2Q9NZ56 1722 aa23.07■■□□□ 1.28
THUMPD2-201ENST00000378727 PDE3BQ13370 1112 aa23.07■■□□□ 1.28
THUMPD2-201ENST00000378727 COL3A1P02461 1466 aaPredicted RBP23.06■■□□□ 1.28
THUMPD2-201ENST00000378727 NEFLP07196 543 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms