RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 NECTIN2Q92692 538 aa24.25■■□□□ 1.47
PCDH8-202ENST00000377942 TOMM22Q9NS69 142 aa24.25■■□□□ 1.47
PCDH8-202ENST00000377942 AKNAQ7Z591 1439 aa24.25■■□□□ 1.47
PCDH8-202ENST00000377942 DIAPH3Q9NSV4 1193 aa24.25■■□□□ 1.47
PCDH8-202ENST00000377942 SMG6Q86US8 1419 aaKnown RBP24.25■■□□□ 1.47
PCDH8-202ENST00000377942 G3BP1Q13283 466 aaKnown RBP eCLIP24.24■■□□□ 1.47
PCDH8-202ENST00000377942 IFIT2P09913 472 aaKnown RBP24.24■■□□□ 1.47
PCDH8-202ENST00000377942 REC8O95072 547 aa24.23■■□□□ 1.47
PCDH8-202ENST00000377942 PDE4AP27815 886 aa24.23■■□□□ 1.47
PCDH8-202ENST00000377942 PRKAR2BP31323 418 aa24.23■■□□□ 1.47
PCDH8-202ENST00000377942 TSHZ2Q9NRE2 1034 aa24.22■■□□□ 1.47
PCDH8-202ENST00000377942 DRC7Q8IY82 874 aa24.22■■□□□ 1.47
PCDH8-202ENST00000377942 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
PCDH8-202ENST00000377942 SLC26A8Q96RN1 970 aa24.21■■□□□ 1.47
PCDH8-202ENST00000377942 MSH5O43196 834 aa24.19■■□□□ 1.46
PCDH8-202ENST00000377942 RIC3Q7Z5B4 369 aa24.19■■□□□ 1.46
PCDH8-202ENST00000377942 CCDC30Q5VVM6 783 aa24.19■■□□□ 1.46
PCDH8-202ENST00000377942 CHAF1AQ13111 956 aaPredicted RBP24.18■■□□□ 1.46
PCDH8-202ENST00000377942 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
PCDH8-202ENST00000377942 MSNP26038 577 aaKnown RBP24.17■■□□□ 1.46
PCDH8-202ENST00000377942 TATP17735 454 aaPredicted RBP24.16■■□□□ 1.46
PCDH8-202ENST00000377942 DENND4BO75064 1496 aaPredicted RBP24.16■■□□□ 1.46
PCDH8-202ENST00000377942 ZKSCAN1P17029 563 aaPredicted RBP24.16■■□□□ 1.46
PCDH8-202ENST00000377942 NOL8Q76FK4 1167 aaKnown RBP24.16■■□□□ 1.46
PCDH8-202ENST00000377942 NOL10Q9BSC4 688 aaKnown RBP24.16■■□□□ 1.46
PCDH8-202ENST00000377942 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
PCDH8-202ENST00000377942 TPM4P67936 248 aa24.15■■□□□ 1.46
PCDH8-202ENST00000377942 GNAI3P08754 354 aa24.14■■□□□ 1.46
PCDH8-202ENST00000377942 ERC2O15083 957 aa24.14■■□□□ 1.45
PCDH8-202ENST00000377942 PNISRQ8TF01 805 aaKnown RBP24.14■■□□□ 1.45
PCDH8-202ENST00000377942 UBTFL1P0CB47 393 aaPredicted RBP24.13■■□□□ 1.45
PCDH8-202ENST00000377942 CPLX2Q6PUV4 134 aaKnown RBP24.13■■□□□ 1.45
PCDH8-202ENST00000377942 AMOTL1Q8IY63 956 aa24.13■■□□□ 1.45
PCDH8-202ENST00000377942 ATP6V1DQ9Y5K8 247 aa24.13■■□□□ 1.45
PCDH8-202ENST00000377942 FANCAO15360 1455 aa24.12■■□□□ 1.45
PCDH8-202ENST00000377942 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
PCDH8-202ENST00000377942 SYNE3Q6ZMZ3 975 aa24.11■■□□□ 1.45
PCDH8-202ENST00000377942 SULT6B1Q6IMI4 303 aa24.11■■□□□ 1.45
PCDH8-202ENST00000377942 RNF20Q5VTR2 975 aa24.1■■□□□ 1.45
PCDH8-202ENST00000377942 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
PCDH8-202ENST00000377942 VPS37DQ86XT2 251 aa24.09■■□□□ 1.45
PCDH8-202ENST00000377942 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
PCDH8-202ENST00000377942 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
PCDH8-202ENST00000377942 FAM184AQ8NB25 1140 aa24.09■■□□□ 1.45
PCDH8-202ENST00000377942 NUDT16Q96DE0 195 aaKnown RBP24.09■■□□□ 1.45
PCDH8-202ENST00000377942 CLSTN1O94985 981 aa24.08■■□□□ 1.45
PCDH8-202ENST00000377942 TWISTNBQ3B726 338 aaPredicted RBP24.08■■□□□ 1.45
PCDH8-202ENST00000377942 AKAP17AQ02040 695 aaKnown RBP24.08■■□□□ 1.45
PCDH8-202ENST00000377942 EXOSC9Q06265 439 aaKnown RBP24.08■■□□□ 1.45
PCDH8-202ENST00000377942 PANK1Q8TE04 598 aa24.08■■□□□ 1.45
PCDH8-202ENST00000377942 NAP1L5Q96NT1 182 aaPredicted RBP24.08■■□□□ 1.45
PCDH8-202ENST00000377942 PHF14O94880 888 aa24.08■■□□□ 1.44
PCDH8-202ENST00000377942 SF3A1Q15459 793 aaKnown RBP24.08■■□□□ 1.44
PCDH8-202ENST00000377942 FOXD4L1Q9NU39 408 aa24.07■■□□□ 1.44
PCDH8-202ENST00000377942 INTS3Q68E01 1043 aaKnown RBP24.07■■□□□ 1.44
PCDH8-202ENST00000377942 RASSF8Q8NHQ8 419 aa24.07■■□□□ 1.44
PCDH8-202ENST00000377942 DHX29Q7Z478 1369 aaKnown RBP24.07■■□□□ 1.44
PCDH8-202ENST00000377942 H3BQV1 296 aa24.07■■□□□ 1.44
PCDH8-202ENST00000377942 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
PCDH8-202ENST00000377942 GZF1Q9H116 711 aaPredicted RBP24.07■■□□□ 1.44
PCDH8-202ENST00000377942 DDX11L8A8MPP1 907 aa24.06■■□□□ 1.44
PCDH8-202ENST00000377942 PDE3AQ14432 1141 aa24.06■■□□□ 1.44
PCDH8-202ENST00000377942 KIAA2012Q0VF49 1180 aa24.06■■□□□ 1.44
PCDH8-202ENST00000377942 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
PCDH8-202ENST00000377942 FCHSD2O94868 740 aa24.04■■□□□ 1.44
PCDH8-202ENST00000377942 WWC1Q8IX03 1113 aa24.04■■□□□ 1.44
PCDH8-202ENST00000377942 CDCA7LQ96GN5 454 aa24.03■■□□□ 1.44
PCDH8-202ENST00000377942 LNPKQ9C0E8 428 aa24.03■■□□□ 1.44
PCDH8-202ENST00000377942 WDR97A6NE52 1622 aa24.03■■□□□ 1.44
PCDH8-202ENST00000377942 KCNH5Q8NCM2 988 aa24.03■■□□□ 1.44
PCDH8-202ENST00000377942 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
PCDH8-202ENST00000377942 DEKP35659 375 aaKnown RBP24.03■■□□□ 1.44
PCDH8-202ENST00000377942 TRDNQ13061 729 aa24.03■■□□□ 1.44
PCDH8-202ENST00000377942 STRN4Q9NRL3 753 aa24.02■■□□□ 1.44
PCDH8-202ENST00000377942 GOLGA6L3A6NEY3 463 aa24.02■■□□□ 1.44
PCDH8-202ENST00000377942 GPATCH8Q9UKJ3 1502 aaKnown RBP24.02■■□□□ 1.44
PCDH8-202ENST00000377942 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 NSD3Q9BZ95 1437 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 TOM1L2Q6ZVM7 507 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 ANO2Q9NQ90 1003 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 IDI1Q13907 227 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 MARCH6O60337 910 aa24.01■■□□□ 1.43
PCDH8-202ENST00000377942 APPP05067 770 aa24■■□□□ 1.43
PCDH8-202ENST00000377942 PRDM11Q9NQV5 511 aa24■■□□□ 1.43
PCDH8-202ENST00000377942 NINLQ9Y2I6 1382 aa24■■□□□ 1.43
PCDH8-202ENST00000377942 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
PCDH8-202ENST00000377942 HDGFL1Q5TGJ6 251 aa23.99■■□□□ 1.43
PCDH8-202ENST00000377942 CLASRPQ8N2M8 674 aaKnown RBP23.99■■□□□ 1.43
PCDH8-202ENST00000377942 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
PCDH8-202ENST00000377942 FAM135AQ9P2D6 1515 aa23.99■■□□□ 1.43
PCDH8-202ENST00000377942 KIF6Q6ZMV9 814 aa23.99■■□□□ 1.43
PCDH8-202ENST00000377942 RBM33Q96EV2 1170 aaKnown RBP23.99■■□□□ 1.43
PCDH8-202ENST00000377942 PLCH2O75038 1416 aa23.98■■□□□ 1.43
PCDH8-202ENST00000377942 TRIM34Q9BYJ4 488 aa23.98■■□□□ 1.43
PCDH8-202ENST00000377942 CABP4P57796 275 aa23.97■■□□□ 1.43
PCDH8-202ENST00000377942 NEUROD6Q96NK8 337 aa23.97■■□□□ 1.43
PCDH8-202ENST00000377942 SKOR2Q2VWA4 1001 aaPredicted RBP23.97■■□□□ 1.43
PCDH8-202ENST00000377942 ATP10BO94823 1461 aa23.97■■□□□ 1.43
PCDH8-202ENST00000377942 CCT4P50991 539 aaKnown RBP23.96■■□□□ 1.43
PCDH8-202ENST00000377942 CDC45O75419 566 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms