RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ABCC11Q96J66 1382 aa21.82■■□□□ 1.08
HDAC6-204ENST00000376643 PIK3C2GO75747 1445 aa21.81■■□□□ 1.08
HDAC6-204ENST00000376643 C8orf37Q96NL8 207 aa21.8■■□□□ 1.08
HDAC6-204ENST00000376643 ORAI2Q96SN7 254 aa21.8■■□□□ 1.08
HDAC6-204ENST00000376643 IFT172Q9UG01 1749 aa21.8■■□□□ 1.08
HDAC6-204ENST00000376643 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
HDAC6-204ENST00000376643 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
HDAC6-204ENST00000376643 SIRT1Q96EB6 747 aa21.78■■□□□ 1.08
HDAC6-204ENST00000376643 KNDC1Q76NI1 1749 aa21.77■■□□□ 1.08
HDAC6-204ENST00000376643 STK26Q9P289 416 aa21.77■■□□□ 1.08
HDAC6-204ENST00000376643 MYOM2P54296 1465 aa21.77■■□□□ 1.07
HDAC6-204ENST00000376643 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
HDAC6-204ENST00000376643 YTHDC2Q9H6S0 1430 aaKnown RBP21.75■■□□□ 1.07
HDAC6-204ENST00000376643 RBM6P78332 1123 aaKnown RBP21.75■■□□□ 1.07
HDAC6-204ENST00000376643 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
HDAC6-204ENST00000376643 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
HDAC6-204ENST00000376643 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
HDAC6-204ENST00000376643 QTRT2Q9H974 415 aaKnown RBP21.73■■□□□ 1.07
HDAC6-204ENST00000376643 RAB3GAP2Q9H2M9 1393 aa21.73■■□□□ 1.07
HDAC6-204ENST00000376643 NRXN1Q9ULB1 1477 aa21.71■■□□□ 1.07
HDAC6-204ENST00000376643 COL22A1Q8NFW1 1626 aaPredicted RBP21.71■■□□□ 1.07
HDAC6-204ENST00000376643 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
HDAC6-204ENST00000376643 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
HDAC6-204ENST00000376643 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
HDAC6-204ENST00000376643 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
HDAC6-204ENST00000376643 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
HDAC6-204ENST00000376643 FOXO3O43524 673 aa21.68■■□□□ 1.06
HDAC6-204ENST00000376643 USP21Q9UK80 565 aa21.68■■□□□ 1.06
HDAC6-204ENST00000376643 PXDNQ92626 1479 aa21.68■■□□□ 1.06
HDAC6-204ENST00000376643 KIF1AQ12756 1690 aa21.68■■□□□ 1.06
HDAC6-204ENST00000376643 HRCP23327 699 aa21.67■■□□□ 1.06
HDAC6-204ENST00000376643 FNBP4Q8N3X1 1017 aaPredicted RBP21.66■■□□□ 1.06
HDAC6-204ENST00000376643 PLEKHH1Q9ULM0 1364 aa21.65■■□□□ 1.06
HDAC6-204ENST00000376643 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
HDAC6-204ENST00000376643 PSME1Q06323 249 aa21.64■■□□□ 1.05
HDAC6-204ENST00000376643 CFAP70Q5T0N1 1121 aa21.64■■□□□ 1.05
HDAC6-204ENST00000376643 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
HDAC6-204ENST00000376643 RGS12O14924 1447 aa21.63■■□□□ 1.05
HDAC6-204ENST00000376643 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
HDAC6-204ENST00000376643 EIF3AQ14152 1382 aaKnown RBP21.62■■□□□ 1.05
HDAC6-204ENST00000376643 POGKQ9P215 609 aa21.62■■□□□ 1.05
HDAC6-204ENST00000376643 SPATA31A3Q5VYP0 1347 aa21.6■■□□□ 1.05
HDAC6-204ENST00000376643 XPCQ01831 940 aaPredicted RBP21.6■■□□□ 1.05
HDAC6-204ENST00000376643 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
HDAC6-204ENST00000376643 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
HDAC6-204ENST00000376643 ATAD2Q6PL18 1390 aa21.6■■□□□ 1.05
HDAC6-204ENST00000376643 ANKARQ7Z5J8 1434 aa21.59■■□□□ 1.05
HDAC6-204ENST00000376643 ATRNO75882 1429 aa21.58■■□□□ 1.05
HDAC6-204ENST00000376643 KRT28Q7Z3Y7 464 aa21.58■■□□□ 1.05
HDAC6-204ENST00000376643 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
HDAC6-204ENST00000376643 SBNO1A3KN83 1393 aa21.56■■□□□ 1.04
HDAC6-204ENST00000376643 ARHGEF10O15013 1369 aa21.56■■□□□ 1.04
HDAC6-204ENST00000376643 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
HDAC6-204ENST00000376643 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
HDAC6-204ENST00000376643 ADGRB2O60241 1585 aa21.55■■□□□ 1.04
HDAC6-204ENST00000376643 MARF1Q9Y4F3 1742 aaKnown RBP21.55■■□□□ 1.04
HDAC6-204ENST00000376643 ADGRB1O14514 1584 aa21.53■■□□□ 1.04
HDAC6-204ENST00000376643 SAFB2Q14151 953 aaKnown RBP eCLIP21.53■■□□□ 1.04
HDAC6-204ENST00000376643 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.03
HDAC6-204ENST00000376643 UNC5CLQ8IV45 518 aa21.51■■□□□ 1.03
HDAC6-204ENST00000376643 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
HDAC6-204ENST00000376643 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
HDAC6-204ENST00000376643 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
HDAC6-204ENST00000376643 GPRASP1Q5JY77 1395 aa21.49■■□□□ 1.03
HDAC6-204ENST00000376643 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.49■■□□□ 1.03
HDAC6-204ENST00000376643 USP32Q8NFA0 1604 aa21.49■■□□□ 1.03
HDAC6-204ENST00000376643 CCDC125Q86Z20 511 aa21.49■■□□□ 1.03
HDAC6-204ENST00000376643 SLIT2O94813 1529 aa21.48■■□□□ 1.03
HDAC6-204ENST00000376643 LMOD2Q6P5Q4 547 aa21.47■■□□□ 1.03
HDAC6-204ENST00000376643 TULP4Q9NRJ4 1543 aa21.46■■□□□ 1.03
HDAC6-204ENST00000376643 WASLO00401 505 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-204ENST00000376643 MINK1Q8N4C8 1332 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-204ENST00000376643 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-204ENST00000376643 PMFBP1Q8TBY8 1022 aa21.43■■□□□ 1.02
HDAC6-204ENST00000376643 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
HDAC6-204ENST00000376643 RALGAPBQ86X10 1494 aa21.41■■□□□ 1.02
HDAC6-204ENST00000376643 VPS72Q15906 364 aa21.41■■□□□ 1.02
HDAC6-204ENST00000376643 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
HDAC6-204ENST00000376643 NWD2Q9ULI1 1742 aa21.4■■□□□ 1.02
HDAC6-204ENST00000376643 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
HDAC6-204ENST00000376643 CCDC9Q9Y3X0 531 aaKnown RBP21.38■■□□□ 1.01
HDAC6-204ENST00000376643 ITSN1Q15811 1721 aa21.36■■□□□ 1.01
HDAC6-204ENST00000376643 KIAA1210Q9ULL0 1709 aa21.36■■□□□ 1.01
HDAC6-204ENST00000376643 GLI3P10071 1580 aa21.36■■□□□ 1.01
HDAC6-204ENST00000376643 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
HDAC6-204ENST00000376643 ABCA3Q99758 1704 aa21.35■■□□□ 1.01
HDAC6-204ENST00000376643 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
HDAC6-204ENST00000376643 TRPM3Q9HCF6 1732 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-204ENST00000376643 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
HDAC6-204ENST00000376643 BLMP54132 1417 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-204ENST00000376643 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-204ENST00000376643 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
HDAC6-204ENST00000376643 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1.01
HDAC6-204ENST00000376643 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1.01
HDAC6-204ENST00000376643 ZRANB1Q9UGI0 708 aa21.33■■□□□ 1.01
HDAC6-204ENST00000376643 ATP7BP35670 1465 aa21.32■■□□□ 1
HDAC6-204ENST00000376643 ALS2Q96Q42 1657 aa21.32■■□□□ 1
HDAC6-204ENST00000376643 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
HDAC6-204ENST00000376643 SEPT12Q8IYM1 358 aa21.32■■□□□ 1
HDAC6-204ENST00000376643 FAM83GA6ND36 823 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms