RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RALBP1Q15311 655 aa16.87■□□□□ 0.29
MSH5-204ENST00000375755 MYOM1P52179 1685 aa16.87■□□□□ 0.29
MSH5-204ENST00000375755 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
MSH5-204ENST00000375755 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
MSH5-204ENST00000375755 ADGRB1O14514 1584 aa16.85■□□□□ 0.29
MSH5-204ENST00000375755 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
MSH5-204ENST00000375755 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
MSH5-204ENST00000375755 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.29
MSH5-204ENST00000375755 STK26Q9P289 416 aa16.83■□□□□ 0.28
MSH5-204ENST00000375755 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
MSH5-204ENST00000375755 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
MSH5-204ENST00000375755 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
MSH5-204ENST00000375755 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
MSH5-204ENST00000375755 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
MSH5-204ENST00000375755 FAM43AQ8N2R8 423 aa16.81■□□□□ 0.28
MSH5-204ENST00000375755 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
MSH5-204ENST00000375755 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
MSH5-204ENST00000375755 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
MSH5-204ENST00000375755 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
MSH5-204ENST00000375755 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
MSH5-204ENST00000375755 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
MSH5-204ENST00000375755 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
MSH5-204ENST00000375755 SETBP1Q9Y6X0 1596 aa16.8■□□□□ 0.28
MSH5-204ENST00000375755 CARD14Q9BXL6 1004 aa16.8■□□□□ 0.28
MSH5-204ENST00000375755 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
MSH5-204ENST00000375755 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
MSH5-204ENST00000375755 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
MSH5-204ENST00000375755 C8orf34Q49A92 452 aa16.78■□□□□ 0.28
MSH5-204ENST00000375755 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
MSH5-204ENST00000375755 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
MSH5-204ENST00000375755 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.27
MSH5-204ENST00000375755 FAM161AQ3B820 660 aa16.77■□□□□ 0.27
MSH5-204ENST00000375755 SLC12A5Q9H2X9 1139 aa16.76■□□□□ 0.27
MSH5-204ENST00000375755 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
MSH5-204ENST00000375755 ARHGEF28Q8N1W1 1705 aaKnown RBP16.75■□□□□ 0.27
MSH5-204ENST00000375755 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
MSH5-204ENST00000375755 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
MSH5-204ENST00000375755 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
MSH5-204ENST00000375755 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
MSH5-204ENST00000375755 CEBPAP49715 358 aaPredicted RBP16.71■□□□□ 0.27
MSH5-204ENST00000375755 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
MSH5-204ENST00000375755 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.26
MSH5-204ENST00000375755 SPATA31D1Q6ZQQ2 1576 aa16.7■□□□□ 0.26
MSH5-204ENST00000375755 TULP4Q9NRJ4 1543 aa16.7■□□□□ 0.26
MSH5-204ENST00000375755 A2ML1A8K2U0 1454 aa16.7■□□□□ 0.26
MSH5-204ENST00000375755 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
MSH5-204ENST00000375755 TNNT2P45379 298 aaPredicted RBP16.69■□□□□ 0.26
MSH5-204ENST00000375755 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
MSH5-204ENST00000375755 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
MSH5-204ENST00000375755 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
MSH5-204ENST00000375755 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
MSH5-204ENST00000375755 POGKQ9P215 609 aa16.68■□□□□ 0.26
MSH5-204ENST00000375755 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
MSH5-204ENST00000375755 RGS3P49796 1198 aa16.68■□□□□ 0.26
MSH5-204ENST00000375755 RRAGDQ9NQL2 400 aaPredicted RBP16.68■□□□□ 0.26
MSH5-204ENST00000375755 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
MSH5-204ENST00000375755 NSD3Q9BZ95 1437 aa16.66■□□□□ 0.26
MSH5-204ENST00000375755 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
MSH5-204ENST00000375755 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
MSH5-204ENST00000375755 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
MSH5-204ENST00000375755 PTPRMP28827 1452 aa16.66■□□□□ 0.26
MSH5-204ENST00000375755 INSRP06213 1382 aa16.65■□□□□ 0.26
MSH5-204ENST00000375755 EVC2Q86UK5 1308 aa16.63■□□□□ 0.25
MSH5-204ENST00000375755 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
MSH5-204ENST00000375755 PLEKHH1Q9ULM0 1364 aa16.63■□□□□ 0.25
MSH5-204ENST00000375755 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
MSH5-204ENST00000375755 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
MSH5-204ENST00000375755 DUSP27Q5VZP5 1158 aa16.61■□□□□ 0.25
MSH5-204ENST00000375755 USP19O94966 1318 aa16.61■□□□□ 0.25
MSH5-204ENST00000375755 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
MSH5-204ENST00000375755 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
MSH5-204ENST00000375755 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
MSH5-204ENST00000375755 METP08581 1390 aa16.59■□□□□ 0.25
MSH5-204ENST00000375755 TNRQ92752 1358 aa16.59■□□□□ 0.25
MSH5-204ENST00000375755 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
MSH5-204ENST00000375755 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
MSH5-204ENST00000375755 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
MSH5-204ENST00000375755 ADAMTSL3P82987 1691 aa16.58■□□□□ 0.25
MSH5-204ENST00000375755 C3P01024 1663 aa16.58■□□□□ 0.24
MSH5-204ENST00000375755 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
MSH5-204ENST00000375755 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
MSH5-204ENST00000375755 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
MSH5-204ENST00000375755 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
MSH5-204ENST00000375755 SLKQ9H2G2 1235 aaPredicted RBP16.56■□□□□ 0.24
MSH5-204ENST00000375755 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
MSH5-204ENST00000375755 SEC24BO95487 1268 aa16.56■□□□□ 0.24
MSH5-204ENST00000375755 L1TD1Q5T7N2 865 aaKnown RBP16.56■□□□□ 0.24
MSH5-204ENST00000375755 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
MSH5-204ENST00000375755 UBR1Q8IWV7 1749 aa16.55■□□□□ 0.24
MSH5-204ENST00000375755 LTKP29376 864 aa16.55■□□□□ 0.24
MSH5-204ENST00000375755 ZNF521Q96K83 1311 aa16.54■□□□□ 0.24
MSH5-204ENST00000375755 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
MSH5-204ENST00000375755 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
MSH5-204ENST00000375755 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
MSH5-204ENST00000375755 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
MSH5-204ENST00000375755 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
MSH5-204ENST00000375755 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.24
MSH5-204ENST00000375755 IGHDP01880 384 aa16.52■□□□□ 0.23
MSH5-204ENST00000375755 ARXQ96QS3 562 aa16.51■□□□□ 0.23
MSH5-204ENST00000375755 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms