RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
MSH5-202ENST00000375740 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
MSH5-202ENST00000375740 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
MSH5-202ENST00000375740 PUS7Q96PZ0 661 aaKnown RBP18.42■□□□□ 0.54
MSH5-202ENST00000375740 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
MSH5-202ENST00000375740 AGLP35573 1532 aa18.42■□□□□ 0.54
MSH5-202ENST00000375740 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
MSH5-202ENST00000375740 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
MSH5-202ENST00000375740 EXOC6Q8TAG9 804 aa18.41■□□□□ 0.54
MSH5-202ENST00000375740 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
MSH5-202ENST00000375740 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
MSH5-202ENST00000375740 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
MSH5-202ENST00000375740 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
MSH5-202ENST00000375740 MLECQ14165 292 aa18.39■□□□□ 0.54
MSH5-202ENST00000375740 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.53
MSH5-202ENST00000375740 CLTCQ00610 1675 aaKnown RBP18.39■□□□□ 0.53
MSH5-202ENST00000375740 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
MSH5-202ENST00000375740 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
MSH5-202ENST00000375740 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
MSH5-202ENST00000375740 APAF1O14727 1248 aa18.37■□□□□ 0.53
MSH5-202ENST00000375740 RTL5Q5HYW3 569 aaPredicted RBP18.37■□□□□ 0.53
MSH5-202ENST00000375740 PLIN1O60240 522 aa18.36■□□□□ 0.53
MSH5-202ENST00000375740 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
MSH5-202ENST00000375740 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
MSH5-202ENST00000375740 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
MSH5-202ENST00000375740 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
MSH5-202ENST00000375740 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
MSH5-202ENST00000375740 PRAM1Q96QH2 718 aa18.35■□□□□ 0.53
MSH5-202ENST00000375740 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
MSH5-202ENST00000375740 KIF13AQ9H1H9 1805 aa18.34■□□□□ 0.53
MSH5-202ENST00000375740 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
MSH5-202ENST00000375740 PTPRMP28827 1452 aa18.34■□□□□ 0.53
MSH5-202ENST00000375740 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
MSH5-202ENST00000375740 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
MSH5-202ENST00000375740 POGKQ9P215 609 aa18.34■□□□□ 0.53
MSH5-202ENST00000375740 ALKQ9UM73 1620 aa18.33■□□□□ 0.53
MSH5-202ENST00000375740 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
MSH5-202ENST00000375740 SLFN5Q08AF3 891 aa18.33■□□□□ 0.53
MSH5-202ENST00000375740 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
MSH5-202ENST00000375740 MTHFSP49914 203 aa18.31■□□□□ 0.52
MSH5-202ENST00000375740 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
MSH5-202ENST00000375740 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
MSH5-202ENST00000375740 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
MSH5-202ENST00000375740 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
MSH5-202ENST00000375740 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
MSH5-202ENST00000375740 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
MSH5-202ENST00000375740 A0A1W2PP64 1363 aa18.28■□□□□ 0.52
MSH5-202ENST00000375740 NSD2O96028 1365 aa18.28■□□□□ 0.52
MSH5-202ENST00000375740 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
MSH5-202ENST00000375740 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
MSH5-202ENST00000375740 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.52
MSH5-202ENST00000375740 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.52
MSH5-202ENST00000375740 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
MSH5-202ENST00000375740 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
MSH5-202ENST00000375740 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
MSH5-202ENST00000375740 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
MSH5-202ENST00000375740 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
MSH5-202ENST00000375740 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
MSH5-202ENST00000375740 E9PSI1 815 aa18.25■□□□□ 0.51
MSH5-202ENST00000375740 RUNDC1Q96C34 613 aa18.25■□□□□ 0.51
MSH5-202ENST00000375740 LAS1LQ9Y4W2 734 aaKnown RBP18.25■□□□□ 0.51
MSH5-202ENST00000375740 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
MSH5-202ENST00000375740 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
MSH5-202ENST00000375740 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
MSH5-202ENST00000375740 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
MSH5-202ENST00000375740 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
MSH5-202ENST00000375740 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
MSH5-202ENST00000375740 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
MSH5-202ENST00000375740 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
MSH5-202ENST00000375740 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
MSH5-202ENST00000375740 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
MSH5-202ENST00000375740 FYB1O15117 783 aa18.21■□□□□ 0.51
MSH5-202ENST00000375740 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
MSH5-202ENST00000375740 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
MSH5-202ENST00000375740 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
MSH5-202ENST00000375740 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
MSH5-202ENST00000375740 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
MSH5-202ENST00000375740 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
MSH5-202ENST00000375740 NEFMP07197 916 aa18.19■□□□□ 0.5
MSH5-202ENST00000375740 DLC1Q96QB1 1528 aa18.19■□□□□ 0.5
MSH5-202ENST00000375740 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
MSH5-202ENST00000375740 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.52e-10■■■□□ 16.7
MSH5-202ENST00000375740 BCAR3O75815 825 aa18.17■□□□□ 0.5
MSH5-202ENST00000375740 IQSEC2Q5JU85 1478 aa18.17■□□□□ 0.5
MSH5-202ENST00000375740 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
MSH5-202ENST00000375740 METP08581 1390 aa18.16■□□□□ 0.5
MSH5-202ENST00000375740 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
MSH5-202ENST00000375740 TNRQ92752 1358 aa18.15■□□□□ 0.5
MSH5-202ENST00000375740 NLRP1Q9C000 1473 aa18.14■□□□□ 0.5
MSH5-202ENST00000375740 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
MSH5-202ENST00000375740 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
MSH5-202ENST00000375740 MED14O60244 1454 aa18.14■□□□□ 0.49
MSH5-202ENST00000375740 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
MSH5-202ENST00000375740 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
MSH5-202ENST00000375740 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
MSH5-202ENST00000375740 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
MSH5-202ENST00000375740 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
MSH5-202ENST00000375740 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
MSH5-202ENST00000375740 WASLO00401 505 aaPredicted RBP18.11■□□□□ 0.49
MSH5-202ENST00000375740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms