RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 IGHDP01880 384 aa18.82■□□□□ 0.6
MSH5-201ENST00000375703 NPATQ14207 1427 aa18.82■□□□□ 0.6
MSH5-201ENST00000375703 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
MSH5-201ENST00000375703 SLC4A3P48751 1232 aa18.81■□□□□ 0.6
MSH5-201ENST00000375703 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
MSH5-201ENST00000375703 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
MSH5-201ENST00000375703 MTHFSP49914 203 aa18.8■□□□□ 0.6
MSH5-201ENST00000375703 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
MSH5-201ENST00000375703 COG6Q9Y2V7 657 aa18.8■□□□□ 0.6
MSH5-201ENST00000375703 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
MSH5-201ENST00000375703 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
MSH5-201ENST00000375703 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
MSH5-201ENST00000375703 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
MSH5-201ENST00000375703 CD109Q6YHK3 1445 aa18.77■□□□□ 0.59
MSH5-201ENST00000375703 WDR63Q8IWG1 891 aa18.77■□□□□ 0.59
MSH5-201ENST00000375703 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
MSH5-201ENST00000375703 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
MSH5-201ENST00000375703 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
MSH5-201ENST00000375703 NUTM2DQ5VT03 806 aaPredicted RBP18.75■□□□□ 0.59
MSH5-201ENST00000375703 EVC2Q86UK5 1308 aa18.75■□□□□ 0.59
MSH5-201ENST00000375703 MLH3Q9UHC1 1453 aa18.75■□□□□ 0.59
MSH5-201ENST00000375703 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
MSH5-201ENST00000375703 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
MSH5-201ENST00000375703 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
MSH5-201ENST00000375703 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
MSH5-201ENST00000375703 PPLO60437 1756 aa18.74■□□□□ 0.59
MSH5-201ENST00000375703 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
MSH5-201ENST00000375703 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
MSH5-201ENST00000375703 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
MSH5-201ENST00000375703 CCDC27Q2M243 656 aa18.73■□□□□ 0.59
MSH5-201ENST00000375703 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
MSH5-201ENST00000375703 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
MSH5-201ENST00000375703 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
MSH5-201ENST00000375703 AAMPQ13685 434 aa18.71■□□□□ 0.59
MSH5-201ENST00000375703 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
MSH5-201ENST00000375703 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
MSH5-201ENST00000375703 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.582e-10■■■□□ 16.7
MSH5-201ENST00000375703 PMFBP1Q8TBY8 1022 aa18.7■□□□□ 0.58
MSH5-201ENST00000375703 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
MSH5-201ENST00000375703 ANKRD36BQ8N2N9 1353 aa18.7■□□□□ 0.58
MSH5-201ENST00000375703 ABCC3O15438 1527 aa18.69■□□□□ 0.58
MSH5-201ENST00000375703 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
MSH5-201ENST00000375703 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
MSH5-201ENST00000375703 RAPGEF3O95398 923 aa18.68■□□□□ 0.58
MSH5-201ENST00000375703 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
MSH5-201ENST00000375703 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
MSH5-201ENST00000375703 RLBP1P12271 317 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 NSD2O96028 1365 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 HECW2Q9P2P5 1572 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
MSH5-201ENST00000375703 PCDHB15Q9Y5E8 787 aa18.66■□□□□ 0.58
MSH5-201ENST00000375703 GLI2P10070 1586 aa18.65■□□□□ 0.58
MSH5-201ENST00000375703 IDI1Q13907 227 aa18.65■□□□□ 0.58
MSH5-201ENST00000375703 STK26Q9P289 416 aa18.65■□□□□ 0.58
MSH5-201ENST00000375703 USP19O94966 1318 aa18.64■□□□□ 0.58
MSH5-201ENST00000375703 SEC24BO95487 1268 aa18.64■□□□□ 0.57
MSH5-201ENST00000375703 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.57
MSH5-201ENST00000375703 GSE1Q14687 1217 aa18.64■□□□□ 0.57
MSH5-201ENST00000375703 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
MSH5-201ENST00000375703 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
MSH5-201ENST00000375703 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
MSH5-201ENST00000375703 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
MSH5-201ENST00000375703 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
MSH5-201ENST00000375703 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
MSH5-201ENST00000375703 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
MSH5-201ENST00000375703 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
MSH5-201ENST00000375703 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
MSH5-201ENST00000375703 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
MSH5-201ENST00000375703 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
MSH5-201ENST00000375703 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
MSH5-201ENST00000375703 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
MSH5-201ENST00000375703 A0A1W2PP64 1363 aa18.59■□□□□ 0.57
MSH5-201ENST00000375703 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
MSH5-201ENST00000375703 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
MSH5-201ENST00000375703 CT47B1P0C2W7 299 aaPredicted RBP18.58■□□□□ 0.57
MSH5-201ENST00000375703 TSR2Q969E8 191 aaKnown RBP18.58■□□□□ 0.57
MSH5-201ENST00000375703 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
MSH5-201ENST00000375703 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.56
MSH5-201ENST00000375703 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
MSH5-201ENST00000375703 DZIP1LQ8IYY4 767 aaKnown RBP18.58■□□□□ 0.56
MSH5-201ENST00000375703 PLEKHF1Q96S99 279 aa18.58■□□□□ 0.56
MSH5-201ENST00000375703 ANO8Q9HCE9 1232 aaPredicted RBP18.58■□□□□ 0.56
MSH5-201ENST00000375703 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
MSH5-201ENST00000375703 ARHGAP31Q2M1Z3 1444 aa18.58■□□□□ 0.56
MSH5-201ENST00000375703 BECN1Q14457 450 aa18.57■□□□□ 0.56
MSH5-201ENST00000375703 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
MSH5-201ENST00000375703 NEO1Q92859 1461 aa18.57■□□□□ 0.56
MSH5-201ENST00000375703 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
MSH5-201ENST00000375703 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
MSH5-201ENST00000375703 FYB1O15117 783 aa18.56■□□□□ 0.56
MSH5-201ENST00000375703 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
MSH5-201ENST00000375703 UPF2Q9HAU5 1272 aaKnown RBP18.56■□□□□ 0.56
MSH5-201ENST00000375703 POGKQ9P215 609 aa18.56■□□□□ 0.56
MSH5-201ENST00000375703 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
MSH5-201ENST00000375703 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
MSH5-201ENST00000375703 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
MSH5-201ENST00000375703 PRAM1Q96QH2 718 aa18.55■□□□□ 0.56
MSH5-201ENST00000375703 ATAD2Q6PL18 1390 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms