RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 PMFBP1Q8TBY8 1022 aa22.68■■□□□ 1.22
TUBGCP3-202ENST00000375669 MTHFSP49914 203 aa22.67■■□□□ 1.22
TUBGCP3-202ENST00000375669 MADDQ8WXG6 1647 aa22.67■■□□□ 1.22
TUBGCP3-202ENST00000375669 SYNMO15061 1565 aa22.67■■□□□ 1.22
TUBGCP3-202ENST00000375669 RNF17Q9BXT8 1623 aaKnown RBP22.66■■□□□ 1.22
TUBGCP3-202ENST00000375669 ZMYM3Q14202 1370 aa22.66■■□□□ 1.22
TUBGCP3-202ENST00000375669 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
TUBGCP3-202ENST00000375669 KIF3BO15066 747 aa22.66■■□□□ 1.22
TUBGCP3-202ENST00000375669 TMEM132EQ6IEE7 984 aa22.66■■□□□ 1.22
TUBGCP3-202ENST00000375669 SPAG9O60271 1321 aaKnown RBP22.65■■□□□ 1.22
TUBGCP3-202ENST00000375669 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
TUBGCP3-202ENST00000375669 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
TUBGCP3-202ENST00000375669 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
TUBGCP3-202ENST00000375669 NUTM2DQ5VT03 806 aaPredicted RBP22.64■■□□□ 1.22
TUBGCP3-202ENST00000375669 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.22
TUBGCP3-202ENST00000375669 ATP10AO60312 1499 aa22.64■■□□□ 1.22
TUBGCP3-202ENST00000375669 CALD1Q05682 793 aaKnown RBP22.64■■□□□ 1.21
TUBGCP3-202ENST00000375669 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 C22orf23Q9BZE7 217 aa22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 RWDD1Q9H446 243 aaPredicted RBP22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 DUOX2Q9NRD8 1548 aa22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 MYOM1P52179 1685 aa22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
TUBGCP3-202ENST00000375669 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
TUBGCP3-202ENST00000375669 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
TUBGCP3-202ENST00000375669 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.21
TUBGCP3-202ENST00000375669 UGGT1Q9NYU2 1555 aa22.62■■□□□ 1.21
TUBGCP3-202ENST00000375669 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
TUBGCP3-202ENST00000375669 NSD3Q9BZ95 1437 aa22.61■■□□□ 1.21
TUBGCP3-202ENST00000375669 FOXD4L1Q9NU39 408 aa22.61■■□□□ 1.21
TUBGCP3-202ENST00000375669 KIAA1211Q6ZU35 1233 aa22.61■■□□□ 1.21
TUBGCP3-202ENST00000375669 NPC1L1Q9UHC9 1359 aa22.6■■□□□ 1.21
TUBGCP3-202ENST00000375669 SAFB2Q14151 953 aaKnown RBP eCLIP22.6■■□□□ 1.21
TUBGCP3-202ENST00000375669 ITPRIPQ8IWB1 547 aa22.59■■□□□ 1.21
TUBGCP3-202ENST00000375669 MVPQ14764 893 aaKnown RBP22.59■■□□□ 1.21
TUBGCP3-202ENST00000375669 GAS2L3Q86XJ1 694 aa22.57■■□□□ 1.2
TUBGCP3-202ENST00000375669 SMC4Q9NTJ3 1288 aa22.57■■□□□ 1.2
TUBGCP3-202ENST00000375669 PRDM4Q9UKN5 801 aa22.56■■□□□ 1.2
TUBGCP3-202ENST00000375669 DZIP1LQ8IYY4 767 aaKnown RBP22.56■■□□□ 1.2
TUBGCP3-202ENST00000375669 ZNF692Q9BU19 519 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP3-202ENST00000375669 POLR3AO14802 1390 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP3-202ENST00000375669 U2SURPO15042 1029 aaKnown RBP22.55■■□□□ 1.2
TUBGCP3-202ENST00000375669 CLTCL1P53675 1640 aa22.55■■□□□ 1.2
TUBGCP3-202ENST00000375669 RTEL1-TNFRSF6BF6WH68 1400 aa22.55■■□□□ 1.2
TUBGCP3-202ENST00000375669 SCAPERQ9BY12 1400 aa22.55■■□□□ 1.2
TUBGCP3-202ENST00000375669 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
TUBGCP3-202ENST00000375669 TRIM27P14373 513 aa22.54■■□□□ 1.2
TUBGCP3-202ENST00000375669 AAMPQ13685 434 aa22.54■■□□□ 1.2
TUBGCP3-202ENST00000375669 ZKSCAN2Q63HK3 967 aa22.54■■□□□ 1.2
TUBGCP3-202ENST00000375669 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
TUBGCP3-202ENST00000375669 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
TUBGCP3-202ENST00000375669 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
TUBGCP3-202ENST00000375669 KDM5AP29375 1690 aaKnown RBP22.52■■□□□ 1.2
TUBGCP3-202ENST00000375669 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
TUBGCP3-202ENST00000375669 SSH1Q8WYL5 1049 aa22.51■■□□□ 1.19
TUBGCP3-202ENST00000375669 LNPKQ9C0E8 428 aa22.51■■□□□ 1.19
TUBGCP3-202ENST00000375669 OFD1O75665 1012 aa22.51■■□□□ 1.19
TUBGCP3-202ENST00000375669 WDR63Q8IWG1 891 aa22.51■■□□□ 1.19
TUBGCP3-202ENST00000375669 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
TUBGCP3-202ENST00000375669 CCDC173Q0VFZ6 552 aa22.5■■□□□ 1.19
TUBGCP3-202ENST00000375669 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
TUBGCP3-202ENST00000375669 DDIT3P35638 169 aa22.49■■□□□ 1.19
TUBGCP3-202ENST00000375669 ZSCAN30Q86W11 494 aa22.49■■□□□ 1.19
TUBGCP3-202ENST00000375669 NGEFQ8N5V2 710 aa22.49■■□□□ 1.19
TUBGCP3-202ENST00000375669 PLCH2O75038 1416 aa22.49■■□□□ 1.19
TUBGCP3-202ENST00000375669 CEP152O94986 1710 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 TERF1P54274 439 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 RIPK4P57078 832 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 SKOR2Q2VWA4 1001 aaPredicted RBP22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 TRPM2O94759 1503 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 PPP1R9BQ96SB3 815 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
TUBGCP3-202ENST00000375669 RBM10P98175 930 aaKnown RBP22.47■■□□□ 1.19
TUBGCP3-202ENST00000375669 TMEM57Q8N5G2 664 aa22.47■■□□□ 1.19
TUBGCP3-202ENST00000375669 TNPO1Q92973 898 aaKnown RBP22.47■■□□□ 1.19
TUBGCP3-202ENST00000375669 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.47■■□□□ 1.19
TUBGCP3-202ENST00000375669 SPHKAPQ2M3C7 1700 aa22.47■■□□□ 1.19
TUBGCP3-202ENST00000375669 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
TUBGCP3-202ENST00000375669 PTPRTO14522 1441 aa22.46■■□□□ 1.19
TUBGCP3-202ENST00000375669 CFAP53Q96M91 514 aa22.46■■□□□ 1.19
TUBGCP3-202ENST00000375669 MAP7D2Q96T17 732 aa22.46■■□□□ 1.19
TUBGCP3-202ENST00000375669 GBP4Q96PP9 640 aa22.45■■□□□ 1.19
TUBGCP3-202ENST00000375669 CD2BP2O95400 341 aaKnown RBP22.44■■□□□ 1.18
TUBGCP3-202ENST00000375669 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
TUBGCP3-202ENST00000375669 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
TUBGCP3-202ENST00000375669 RBM42Q9BTD8 480 aaKnown RBP22.44■■□□□ 1.18
TUBGCP3-202ENST00000375669 PTMSP20962 102 aa22.43■■□□□ 1.18
TUBGCP3-202ENST00000375669 MSNP26038 577 aaKnown RBP22.43■■□□□ 1.18
TUBGCP3-202ENST00000375669 NOS1P29475 1434 aa22.42■■□□□ 1.18
TUBGCP3-202ENST00000375669 FBLN1P23142 703 aa22.42■■□□□ 1.18
TUBGCP3-202ENST00000375669 NASPP49321 788 aaPredicted RBP22.42■■□□□ 1.18
TUBGCP3-202ENST00000375669 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
TUBGCP3-202ENST00000375669 KANK1Q14678 1352 aa22.41■■□□□ 1.18
TUBGCP3-202ENST00000375669 ATF7IPQ6VMQ6 1270 aa22.41■■□□□ 1.18
TUBGCP3-202ENST00000375669 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 ANP32BQ92688 251 aaKnown RBP22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 STAC3Q96MF2 364 aa22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 FAM13BQ9NYF5 915 aa22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 IQSEC2Q5JU85 1478 aa22.4■■□□□ 1.18
TUBGCP3-202ENST00000375669 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms