RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 ADGRF5Q8IZF2 1346 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 KANK1Q14678 1352 aa17.15■□□□□ 0.34
MCF2L-204ENST00000375608 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
MCF2L-204ENST00000375608 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
MCF2L-204ENST00000375608 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
MCF2L-204ENST00000375608 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
MCF2L-204ENST00000375608 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
MCF2L-204ENST00000375608 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
MCF2L-204ENST00000375608 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
MCF2L-204ENST00000375608 SOX12O15370 315 aa17.13■□□□□ 0.33
MCF2L-204ENST00000375608 TRIM27P14373 513 aa17.13■□□□□ 0.33
MCF2L-204ENST00000375608 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
MCF2L-204ENST00000375608 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-204ENST00000375608 HMOX1P09601 288 aa17.12■□□□□ 0.33
MCF2L-204ENST00000375608 CAVIN1Q6NZI2 390 aaKnown RBP17.11■□□□□ 0.33
MCF2L-204ENST00000375608 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
MCF2L-204ENST00000375608 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
MCF2L-204ENST00000375608 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
MCF2L-204ENST00000375608 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
MCF2L-204ENST00000375608 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
MCF2L-204ENST00000375608 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
MCF2L-204ENST00000375608 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 SSFA2P28290 1259 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 ATP10BO94823 1461 aa17.1■□□□□ 0.33
MCF2L-204ENST00000375608 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-204ENST00000375608 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
MCF2L-204ENST00000375608 FBLN1P23142 703 aa17.09■□□□□ 0.33
MCF2L-204ENST00000375608 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
MCF2L-204ENST00000375608 WDR63Q8IWG1 891 aa17.08■□□□□ 0.33
MCF2L-204ENST00000375608 CLCN1P35523 988 aa17.08■□□□□ 0.32
MCF2L-204ENST00000375608 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
MCF2L-204ENST00000375608 KIAA0556O60303 1618 aa17.07■□□□□ 0.32
MCF2L-204ENST00000375608 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
MCF2L-204ENST00000375608 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
MCF2L-204ENST00000375608 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
MCF2L-204ENST00000375608 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
MCF2L-204ENST00000375608 SKOR2Q2VWA4 1001 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-204ENST00000375608 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
MCF2L-204ENST00000375608 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
MCF2L-204ENST00000375608 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
MCF2L-204ENST00000375608 GAS2L3Q86XJ1 694 aa17.03■□□□□ 0.32
MCF2L-204ENST00000375608 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
MCF2L-204ENST00000375608 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
MCF2L-204ENST00000375608 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
MCF2L-204ENST00000375608 SLC4A10Q6U841 1118 aa17.02■□□□□ 0.32
MCF2L-204ENST00000375608 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
MCF2L-204ENST00000375608 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.31
MCF2L-204ENST00000375608 K7ELQ4 463 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-204ENST00000375608 AAMPQ13685 434 aa17.01■□□□□ 0.31
MCF2L-204ENST00000375608 RRP9O43818 475 aaKnown RBP17.01■□□□□ 0.31
MCF2L-204ENST00000375608 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
MCF2L-204ENST00000375608 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
MCF2L-204ENST00000375608 PLA2R1Q13018 1463 aa17■□□□□ 0.31
MCF2L-204ENST00000375608 PRKAR2BP31323 418 aa17■□□□□ 0.31
MCF2L-204ENST00000375608 EVC2Q86UK5 1308 aa17■□□□□ 0.31
MCF2L-204ENST00000375608 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
MCF2L-204ENST00000375608 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
MCF2L-204ENST00000375608 WDR7Q9Y4E6 1490 aa16.99■□□□□ 0.31
MCF2L-204ENST00000375608 PIK3C2GO75747 1445 aa16.98■□□□□ 0.31
MCF2L-204ENST00000375608 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
MCF2L-204ENST00000375608 SYCP2Q9BX26 1530 aa16.98■□□□□ 0.31
MCF2L-204ENST00000375608 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
MCF2L-204ENST00000375608 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
MCF2L-204ENST00000375608 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
MCF2L-204ENST00000375608 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
MCF2L-204ENST00000375608 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
MCF2L-204ENST00000375608 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
MCF2L-204ENST00000375608 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-204ENST00000375608 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
MCF2L-204ENST00000375608 CD2BP2O95400 341 aaKnown RBP16.96■□□□□ 0.31
MCF2L-204ENST00000375608 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
MCF2L-204ENST00000375608 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
MCF2L-204ENST00000375608 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
MCF2L-204ENST00000375608 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-204ENST00000375608 TRIM6-TRIM34B2RNG4 842 aa16.95■□□□□ 0.3
MCF2L-204ENST00000375608 CDC45O75419 566 aa16.95■□□□□ 0.3
MCF2L-204ENST00000375608 CHMP4BQ9H444 224 aaKnown RBP16.95■□□□□ 0.3
MCF2L-204ENST00000375608 ST18O60284 1047 aa16.95■□□□□ 0.3
MCF2L-204ENST00000375608 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 BCL11BQ9C0K0 894 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-204ENST00000375608 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-204ENST00000375608 PTMSP20962 102 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 ZSCAN30Q86W11 494 aa16.94■□□□□ 0.3
MCF2L-204ENST00000375608 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
MCF2L-204ENST00000375608 RILPL2Q969X0 211 aa16.93■□□□□ 0.3
MCF2L-204ENST00000375608 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-204ENST00000375608 INSRP06213 1382 aa16.92■□□□□ 0.3
MCF2L-204ENST00000375608 SYCE3A1L190 88 aa16.92■□□□□ 0.3
MCF2L-204ENST00000375608 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
MCF2L-204ENST00000375608 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-204ENST00000375608 HDAC1Q13547 482 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-204ENST00000375608 NEK4P51957 841 aa16.91■□□□□ 0.3
MCF2L-204ENST00000375608 NUCB1Q02818 461 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms