RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 C3P01024 1663 aa18.74■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 SLIT1O75093 1534 aa18.74■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 METP08581 1390 aa18.73■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 USP32Q8NFA0 1604 aa18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 MED14O60244 1454 aa18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 ADAMTS13Q76LX8 1427 aa18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 NSD3Q9BZ95 1437 aa18.71■□□□□ 0.59
NIPSNAP3A-201ENST00000374767 NSD2O96028 1365 aa18.71■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 LTKP29376 864 aa18.71■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 BLMP54132 1417 aaPredicted RBP18.68■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 KNDC1Q76NI1 1749 aa18.66■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 CPS1P31327 1500 aa18.65■□□□□ 0.58
NIPSNAP3A-201ENST00000374767 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 NEFLP07196 543 aa18.61■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 ADAMTSL3P82987 1691 aa18.6■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 BCANQ96GW7 911 aa18.6■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 ATP7BP35670 1465 aa18.6■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 HDGFL2Q7Z4V5 671 aaPredicted RBP18.6■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 DIP2AQ14689 1571 aa18.58■□□□□ 0.57
NIPSNAP3A-201ENST00000374767 ERICH6BQ5W0A0 696 aa18.58■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 FKBP8Q14318 412 aa18.57■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 PIK3R4Q99570 1358 aa18.57■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 NGEFQ8N5V2 710 aa18.56■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 CPSF1Q10570 1443 aaKnown RBP18.55■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 FYB1O15117 783 aa18.55■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 ADGRB2O60241 1585 aa18.54■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 NUDT16Q96DE0 195 aaKnown RBP18.53■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 RIMS1Q86UR5 1692 aaKnown RBP18.53■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 AMOTL2Q9Y2J4 779 aa18.52■□□□□ 0.56
NIPSNAP3A-201ENST00000374767 MTHFSP49914 203 aa18.51■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 ANKLE2Q86XL3 938 aa18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 ZNF142P52746 1687 aaPredicted RBP18.5■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
NIPSNAP3A-201ENST00000374767 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.45■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 ANKRD26Q9UPS8 1709 aa18.44■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 APAF1O14727 1248 aa18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 AATKQ6ZMQ8 1374 aa18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 CDCA7LQ96GN5 454 aa18.41■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
NIPSNAP3A-201ENST00000374767 KCNA6P17658 529 aa18.39■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.38■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
NIPSNAP3A-201ENST00000374767 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms