RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 WAPLQ7Z5K2 1190 aa23.99■■□□□ 1.43
HDAC8-202ENST00000373556 SOS2Q07890 1332 aaPredicted RBP23.99■■□□□ 1.43
HDAC8-202ENST00000373556 PIK3C2GO75747 1445 aa23.99■■□□□ 1.43
HDAC8-202ENST00000373556 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
HDAC8-202ENST00000373556 TECPR2O15040 1411 aa23.98■■□□□ 1.43
HDAC8-202ENST00000373556 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
HDAC8-202ENST00000373556 ADAMTS2O95450 1211 aa23.96■■□□□ 1.43
HDAC8-202ENST00000373556 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
HDAC8-202ENST00000373556 PLEKHH1Q9ULM0 1364 aa23.95■■□□□ 1.42
HDAC8-202ENST00000373556 NUTM2FA1L443 756 aa23.94■■□□□ 1.42
HDAC8-202ENST00000373556 ABCC11Q96J66 1382 aa23.93■■□□□ 1.42
HDAC8-202ENST00000373556 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
HDAC8-202ENST00000373556 RAB3GAP2Q9H2M9 1393 aa23.92■■□□□ 1.42
HDAC8-202ENST00000373556 NGLY1Q96IV0 654 aa23.92■■□□□ 1.42
HDAC8-202ENST00000373556 CDK12Q9NYV4 1490 aaPredicted RBP23.92■■□□□ 1.42
HDAC8-202ENST00000373556 XPCQ01831 940 aaPredicted RBP23.91■■□□□ 1.42
HDAC8-202ENST00000373556 QTRT2Q9H974 415 aaKnown RBP23.91■■□□□ 1.42
HDAC8-202ENST00000373556 PXDNQ92626 1479 aa23.91■■□□□ 1.42
HDAC8-202ENST00000373556 COL22A1Q8NFW1 1626 aaPredicted RBP23.91■■□□□ 1.42
HDAC8-202ENST00000373556 NPHP3Q7Z494 1330 aa23.9■■□□□ 1.42
HDAC8-202ENST00000373556 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
HDAC8-202ENST00000373556 UPF1Q92900 1129 aaKnown RBP eCLIP23.9■■□□□ 1.42
HDAC8-202ENST00000373556 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
HDAC8-202ENST00000373556 FOXO3O43524 673 aa23.89■■□□□ 1.41
HDAC8-202ENST00000373556 NRXN1Q9ULB1 1477 aa23.88■■□□□ 1.41
HDAC8-202ENST00000373556 RGS12O14924 1447 aa23.88■■□□□ 1.41
HDAC8-202ENST00000373556 MYOM2P54296 1465 aa23.87■■□□□ 1.41
HDAC8-202ENST00000373556 CFAP70Q5T0N1 1121 aa23.87■■□□□ 1.41
HDAC8-202ENST00000373556 C14orf93Q9H972 538 aaKnown RBP23.87■■□□□ 1.41
HDAC8-202ENST00000373556 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
HDAC8-202ENST00000373556 USP21Q9UK80 565 aa23.83■■□□□ 1.41
HDAC8-202ENST00000373556 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.4
HDAC8-202ENST00000373556 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
HDAC8-202ENST00000373556 KIF1AQ12756 1690 aa23.82■■□□□ 1.4
HDAC8-202ENST00000373556 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
HDAC8-202ENST00000373556 SAFB2Q14151 953 aaKnown RBP eCLIP23.8■■□□□ 1.4
HDAC8-202ENST00000373556 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
HDAC8-202ENST00000373556 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
HDAC8-202ENST00000373556 PRAM1Q96QH2 718 aa23.78■■□□□ 1.4
HDAC8-202ENST00000373556 TRPC5Q9UL62 973 aaPredicted RBP23.77■■□□□ 1.4
HDAC8-202ENST00000373556 ATRNO75882 1429 aa23.76■■□□□ 1.39
HDAC8-202ENST00000373556 KRT28Q7Z3Y7 464 aa23.75■■□□□ 1.39
HDAC8-202ENST00000373556 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
HDAC8-202ENST00000373556 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
HDAC8-202ENST00000373556 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
HDAC8-202ENST00000373556 BCL9LQ86UU0 1499 aa23.74■■□□□ 1.39
HDAC8-202ENST00000373556 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
HDAC8-202ENST00000373556 POGKQ9P215 609 aa23.73■■□□□ 1.39
HDAC8-202ENST00000373556 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
HDAC8-202ENST00000373556 DCAF11Q8TEB1 546 aa23.72■■□□□ 1.39
HDAC8-202ENST00000373556 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
HDAC8-202ENST00000373556 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
HDAC8-202ENST00000373556 PLEKHG5O94827 1062 aa23.69■■□□□ 1.38
HDAC8-202ENST00000373556 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
HDAC8-202ENST00000373556 TNS3Q68CZ2 1445 aa23.68■■□□□ 1.38
HDAC8-202ENST00000373556 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
HDAC8-202ENST00000373556 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.67■■□□□ 1.38
HDAC8-202ENST00000373556 ATAD2Q6PL18 1390 aa23.66■■□□□ 1.38
HDAC8-202ENST00000373556 PSME1Q06323 249 aa23.66■■□□□ 1.38
HDAC8-202ENST00000373556 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
HDAC8-202ENST00000373556 MINK1Q8N4C8 1332 aaPredicted RBP23.65■■□□□ 1.38
HDAC8-202ENST00000373556 CABLES1Q8TDN4 633 aa23.65■■□□□ 1.38
HDAC8-202ENST00000373556 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
HDAC8-202ENST00000373556 SLIT2O94813 1529 aa23.64■■□□□ 1.38
HDAC8-202ENST00000373556 HRCP23327 699 aa23.64■■□□□ 1.37
HDAC8-202ENST00000373556 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
HDAC8-202ENST00000373556 LMOD2Q6P5Q4 547 aa23.64■■□□□ 1.37
HDAC8-202ENST00000373556 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
HDAC8-202ENST00000373556 ABCA3Q99758 1704 aa23.64■■□□□ 1.37
HDAC8-202ENST00000373556 SBNO1A3KN83 1393 aa23.63■■□□□ 1.37
HDAC8-202ENST00000373556 UNC5CLQ8IV45 518 aa23.62■■□□□ 1.37
HDAC8-202ENST00000373556 GLI3P10071 1580 aa23.61■■□□□ 1.37
HDAC8-202ENST00000373556 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
HDAC8-202ENST00000373556 RALGAPBQ86X10 1494 aa23.6■■□□□ 1.37
HDAC8-202ENST00000373556 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
HDAC8-202ENST00000373556 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
HDAC8-202ENST00000373556 TRPM3Q9HCF6 1732 aaPredicted RBP23.59■■□□□ 1.37
HDAC8-202ENST00000373556 ARHGEF10O15013 1369 aa23.59■■□□□ 1.37
HDAC8-202ENST00000373556 EP400Q96L91 3159 aa23.59■■□□□ 1.37
HDAC8-202ENST00000373556 TULP4Q9NRJ4 1543 aa23.59■■□□□ 1.37
HDAC8-202ENST00000373556 STAC3Q96MF2 364 aa23.57■■□□□ 1.36
HDAC8-202ENST00000373556 WASLO00401 505 aaPredicted RBP23.56■■□□□ 1.36
HDAC8-202ENST00000373556 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
HDAC8-202ENST00000373556 NWD2Q9ULI1 1742 aa23.55■■□□□ 1.36
HDAC8-202ENST00000373556 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
HDAC8-202ENST00000373556 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
HDAC8-202ENST00000373556 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
HDAC8-202ENST00000373556 FAM83GA6ND36 823 aa23.51■■□□□ 1.35
HDAC8-202ENST00000373556 VPS72Q15906 364 aa23.5■■□□□ 1.35
HDAC8-202ENST00000373556 NGDNQ8NEJ9 315 aaKnown RBP23.5■■□□□ 1.35
HDAC8-202ENST00000373556 CCDC9Q9Y3X0 531 aaKnown RBP23.5■■□□□ 1.35
HDAC8-202ENST00000373556 ITSN1Q15811 1721 aa23.5■■□□□ 1.35
HDAC8-202ENST00000373556 ATP7BP35670 1465 aa23.49■■□□□ 1.35
HDAC8-202ENST00000373556 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
HDAC8-202ENST00000373556 KIAA1210Q9ULL0 1709 aa23.47■■□□□ 1.35
HDAC8-202ENST00000373556 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
HDAC8-202ENST00000373556 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
HDAC8-202ENST00000373556 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
HDAC8-202ENST00000373556 NUDT16Q96DE0 195 aaKnown RBP23.46■■□□□ 1.35
HDAC8-202ENST00000373556 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms