RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ADAMTS8Q9UP79 889 aa26.2■■□□□ 1.79
HDAC1-201ENST00000373548 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
HDAC1-201ENST00000373548 POGKQ9P215 609 aa26.2■■□□□ 1.78
HDAC1-201ENST00000373548 DLC1Q96QB1 1528 aa26.2■■□□□ 1.78
HDAC1-201ENST00000373548 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
HDAC1-201ENST00000373548 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
HDAC1-201ENST00000373548 SALL2Q9Y467 1007 aaPredicted RBP26.17■■□□□ 1.78
HDAC1-201ENST00000373548 WDR43Q15061 677 aaKnown RBP eCLIP26.17■■□□□ 1.78
HDAC1-201ENST00000373548 SRPK2P78362 688 aaKnown RBP26.15■■□□□ 1.78
HDAC1-201ENST00000373548 PELP1Q8IZL8 1130 aaKnown RBP26.15■■□□□ 1.78
HDAC1-201ENST00000373548 NINLQ9Y2I6 1382 aa26.15■■□□□ 1.78
HDAC1-201ENST00000373548 ERICH6BQ5W0A0 696 aa26.14■■□□□ 1.77
HDAC1-201ENST00000373548 ATAD2Q6PL18 1390 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 C3P01024 1663 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 ABCC11Q96J66 1382 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 TMEM2Q9UHN6 1383 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 CGNL1Q0VF96 1302 aa26.13■■□□□ 1.77
HDAC1-201ENST00000373548 RNF123Q5XPI4 1314 aa26.11■■□□□ 1.77
HDAC1-201ENST00000373548 FER1L4A9Z1Z3 1794 aa26.11■■□□□ 1.77
HDAC1-201ENST00000373548 HDGFP51858 240 aaKnown RBP26.11■■□□□ 1.77
HDAC1-201ENST00000373548 MORC1Q86VD1 984 aa26.11■■□□□ 1.77
HDAC1-201ENST00000373548 METP08581 1390 aa26.1■■□□□ 1.77
HDAC1-201ENST00000373548 NLRP1Q9C000 1473 aa26.1■■□□□ 1.77
HDAC1-201ENST00000373548 CEBPAP49715 358 aaPredicted RBP26.1■■□□□ 1.77
HDAC1-201ENST00000373548 A0A1W2PP64 1363 aa26.1■■□□□ 1.77
HDAC1-201ENST00000373548 PLEKHH1Q9ULM0 1364 aa26.09■■□□□ 1.77
HDAC1-201ENST00000373548 WAPLQ7Z5K2 1190 aa26.08■■□□□ 1.77
HDAC1-201ENST00000373548 POLR3AO14802 1390 aaPredicted RBP26.08■■□□□ 1.77
HDAC1-201ENST00000373548 NSD2O96028 1365 aa26.08■■□□□ 1.77
HDAC1-201ENST00000373548 KNDC1Q76NI1 1749 aa26.08■■□□□ 1.76
HDAC1-201ENST00000373548 CDK19Q9BWU1 502 aa26.08■■□□□ 1.76
HDAC1-201ENST00000373548 CD163L1Q9NR16 1453 aa26.07■■□□□ 1.76
HDAC1-201ENST00000373548 CDCA7LQ96GN5 454 aa26.05■■□□□ 1.76
HDAC1-201ENST00000373548 TNNT2P45379 298 aaPredicted RBP26.03■■□□□ 1.76
HDAC1-201ENST00000373548 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
HDAC1-201ENST00000373548 TECPR2O15040 1411 aa26.03■■□□□ 1.76
HDAC1-201ENST00000373548 TERF2IPQ9NYB0 399 aa26.02■■□□□ 1.76
HDAC1-201ENST00000373548 PPP4R2Q9NY27 417 aa26.01■■□□□ 1.75
HDAC1-201ENST00000373548 CPS1P31327 1500 aa26.01■■□□□ 1.75
HDAC1-201ENST00000373548 ADAMTS13Q76LX8 1427 aa26■■□□□ 1.75
HDAC1-201ENST00000373548 FAM135BQ49AJ0 1406 aa25.99■■□□□ 1.75
HDAC1-201ENST00000373548 ANKRD26Q9UPS8 1709 aa25.99■■□□□ 1.75
HDAC1-201ENST00000373548 LTKP29376 864 aa25.99■■□□□ 1.75
HDAC1-201ENST00000373548 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
HDAC1-201ENST00000373548 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
HDAC1-201ENST00000373548 CCDC146Q8IYE0 955 aa25.98■■□□□ 1.75
HDAC1-201ENST00000373548 SIRT1Q96EB6 747 aa25.97■■□□□ 1.75
HDAC1-201ENST00000373548 ZNF521Q96K83 1311 aa25.97■■□□□ 1.75
HDAC1-201ENST00000373548 CABP1Q9NZU7 370 aa25.97■■□□□ 1.75
HDAC1-201ENST00000373548 MTHFSP49914 203 aa25.96■■□□□ 1.75
HDAC1-201ENST00000373548 RCAN3Q9UKA8 241 aa25.96■■□□□ 1.75
HDAC1-201ENST00000373548 HDGFL2Q7Z4V5 671 aaPredicted RBP25.95■■□□□ 1.74
HDAC1-201ENST00000373548 SLIT1O75093 1534 aa25.95■■□□□ 1.74
HDAC1-201ENST00000373548 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
HDAC1-201ENST00000373548 MED14O60244 1454 aa25.94■■□□□ 1.74
HDAC1-201ENST00000373548 ARHGAP23Q9P227 1491 aa25.94■■□□□ 1.74
HDAC1-201ENST00000373548 ATP7BP35670 1465 aa25.93■■□□□ 1.74
HDAC1-201ENST00000373548 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
HDAC1-201ENST00000373548 WASLO00401 505 aaPredicted RBP25.93■■□□□ 1.74
HDAC1-201ENST00000373548 GGNBP2Q9H3C7 697 aa25.93■■□□□ 1.74
HDAC1-201ENST00000373548 APAF1O14727 1248 aa25.92■■□□□ 1.74
HDAC1-201ENST00000373548 FYB1O15117 783 aa25.92■■□□□ 1.74
HDAC1-201ENST00000373548 ROBO2Q9HCK4 1378 aa25.9■■□□□ 1.74
HDAC1-201ENST00000373548 RRP1P56182 461 aaKnown RBP25.9■■□□□ 1.74
HDAC1-201ENST00000373548 CFAP53Q96M91 514 aa25.9■■□□□ 1.74
HDAC1-201ENST00000373548 EID1Q9Y6B2 187 aa25.89■■□□□ 1.74
HDAC1-201ENST00000373548 TSHZ2Q9NRE2 1034 aa25.88■■□□□ 1.73
HDAC1-201ENST00000373548 GOLGA2Q08379 1002 aa25.87■■□□□ 1.73
HDAC1-201ENST00000373548 PPIP5K1Q6PFW1 1433 aa25.86■■□□□ 1.73
HDAC1-201ENST00000373548 DUSP27Q5VZP5 1158 aa25.85■■□□□ 1.73
HDAC1-201ENST00000373548 B4GALNT3Q6L9W6 998 aa25.85■■□□□ 1.73
HDAC1-201ENST00000373548 CPSF1Q10570 1443 aaKnown RBP25.85■■□□□ 1.73
HDAC1-201ENST00000373548 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.85■■□□□ 1.73
HDAC1-201ENST00000373548 NGEFQ8N5V2 710 aa25.84■■□□□ 1.73
HDAC1-201ENST00000373548 RIMS1Q86UR5 1692 aaKnown RBP25.84■■□□□ 1.73
HDAC1-201ENST00000373548 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
HDAC1-201ENST00000373548 PTPRUQ92729 1446 aa25.84■■□□□ 1.73
HDAC1-201ENST00000373548 THEMISQ8N1K5 641 aaPredicted RBP25.84■■□□□ 1.73
HDAC1-201ENST00000373548 SLC26A8Q96RN1 970 aa25.84■■□□□ 1.73
HDAC1-201ENST00000373548 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
HDAC1-201ENST00000373548 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
HDAC1-201ENST00000373548 SLFN5Q08AF3 891 aa25.82■■□□□ 1.72
HDAC1-201ENST00000373548 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
HDAC1-201ENST00000373548 IQSEC2Q5JU85 1478 aa25.81■■□□□ 1.72
HDAC1-201ENST00000373548 RUNDC1Q96C34 613 aa25.81■■□□□ 1.72
HDAC1-201ENST00000373548 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
HDAC1-201ENST00000373548 CEP170BQ9Y4F5 1589 aaPredicted RBP25.8■■□□□ 1.72
HDAC1-201ENST00000373548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
HDAC1-201ENST00000373548 TRMT2AQ8IZ69 625 aaKnown RBP25.79■■□□□ 1.72
HDAC1-201ENST00000373548 AKAP12Q02952 1782 aa25.79■■□□□ 1.72
HDAC1-201ENST00000373548 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
HDAC1-201ENST00000373548 TBX22Q9Y458 520 aa25.79■■□□□ 1.72
HDAC1-201ENST00000373548 CCDC61Q9Y6R9 512 aa25.79■■□□□ 1.72
HDAC1-201ENST00000373548 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
HDAC1-201ENST00000373548 DIP2AQ14689 1571 aa25.78■■□□□ 1.72
HDAC1-201ENST00000373548 PRR36Q9H6K5 1346 aa25.78■■□□□ 1.72
HDAC1-201ENST00000373548 ITSN1Q15811 1721 aa25.78■■□□□ 1.72
HDAC1-201ENST00000373548 SPINK5Q9NQ38 1064 aaPredicted RBP25.77■■□□□ 1.72
HDAC1-201ENST00000373548 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms