RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TCERG1O14776 1098 aaKnown RBP8.23□□□□□ -1.09
CHD6-203ENST00000373233 CASC1Q6TDU7 716 aa8.23□□□□□ -1.09
CHD6-203ENST00000373233 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
CHD6-203ENST00000373233 NOS1P29475 1434 aa8.23□□□□□ -1.09
CHD6-203ENST00000373233 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
CHD6-203ENST00000373233 POLR1AO95602 1720 aaPredicted RBP8.22□□□□□ -1.09
CHD6-203ENST00000373233 KDM5AP29375 1690 aaKnown RBP8.22□□□□□ -1.09
CHD6-203ENST00000373233 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
CHD6-203ENST00000373233 PAXIP1Q6ZW49 1069 aaPredicted RBP8.22□□□□□ -1.09
CHD6-203ENST00000373233 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
CHD6-203ENST00000373233 E9PCH4 1651 aa8.21□□□□□ -1.09
CHD6-203ENST00000373233 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.09
CHD6-203ENST00000373233 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.09
CHD6-203ENST00000373233 TEX35Q5T0J7 233 aa8.21□□□□□ -1.09
CHD6-203ENST00000373233 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.09
CHD6-203ENST00000373233 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
CHD6-203ENST00000373233 BRD4O60885 1362 aaPredicted RBP8.21□□□□□ -1.1
CHD6-203ENST00000373233 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
CHD6-203ENST00000373233 ZBED9Q6R2W3 1325 aa8.2□□□□□ -1.1
CHD6-203ENST00000373233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.2□□□□□ -1.15e-7■■■□□ 16.2
CHD6-203ENST00000373233 TRPM2O94759 1503 aa8.2□□□□□ -1.1
CHD6-203ENST00000373233 SYAP1Q96A49 352 aaPredicted RBP8.19□□□□□ -1.1
CHD6-203ENST00000373233 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
CHD6-203ENST00000373233 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 KDM5CP41229 1560 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 CLTCL1P53675 1640 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 UHRF1BP1Q6BDS2 1440 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 GPS2Q13227 327 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 CWC15Q9P013 229 aaKnown RBP8.19□□□□□ -1.1
CHD6-203ENST00000373233 ATP10AO60312 1499 aa8.19□□□□□ -1.1
CHD6-203ENST00000373233 CCDC146Q8IYE0 955 aa8.18□□□□□ -1.1
CHD6-203ENST00000373233 U2AF1L5P0DN76 240 aaPredicted RBP8.18□□□□□ -1.1
CHD6-203ENST00000373233 U2AF1Q01081 240 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD6-203ENST00000373233 NOC3LQ8WTT2 800 aaKnown RBP8.18□□□□□ -1.1
CHD6-203ENST00000373233 LMOD2Q6P5Q4 547 aa8.18□□□□□ -1.1
CHD6-203ENST00000373233 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
CHD6-203ENST00000373233 CAMSAP1Q5T5Y3 1602 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 SOX12O15370 315 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 DISP3Q9P2K9 1392 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 ADGRF5Q8IZF2 1346 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 EFCAB6Q5THR3 1501 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 KIDINS220Q9ULH0 1771 aa8.17□□□□□ -1.1
CHD6-203ENST00000373233 PRAM1Q96QH2 718 aa8.16□□□□□ -1.1
CHD6-203ENST00000373233 TRPM1Q7Z4N2 1603 aa8.16□□□□□ -1.1
CHD6-203ENST00000373233 FBXO31Q5XUX0 539 aaPredicted RBP8.16□□□□□ -1.1
CHD6-203ENST00000373233 GOLGA6L4A6NEF3 574 aa8.16□□□□□ -1.1
CHD6-203ENST00000373233 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
CHD6-203ENST00000373233 FTSJ3Q8IY81 847 aaKnown RBP8.15□□□□□ -1.1
CHD6-203ENST00000373233 PAK3O75914 559 aaPredicted RBP8.15□□□□□ -1.1
CHD6-203ENST00000373233 PDE3BQ13370 1112 aa8.15□□□□□ -1.1
CHD6-203ENST00000373233 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
CHD6-203ENST00000373233 MLH3Q9UHC1 1453 aa8.15□□□□□ -1.1
CHD6-203ENST00000373233 ABCC3O15438 1527 aa8.15□□□□□ -1.11
CHD6-203ENST00000373233 NGDNQ8NEJ9 315 aaKnown RBP8.15□□□□□ -1.11
CHD6-203ENST00000373233 PPRC1Q5VV67 1664 aaKnown RBP8.15□□□□□ -1.11
CHD6-203ENST00000373233 HTATSF1O43719 755 aaKnown RBP8.15□□□□□ -1.11
CHD6-203ENST00000373233 FRAT1Q92837 279 aaPredicted RBP8.15□□□□□ -1.11
CHD6-203ENST00000373233 ZHX1Q9UKY1 873 aaPredicted RBP8.14□□□□□ -1.11
CHD6-203ENST00000373233 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 TNRQ92752 1358 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 PRDM15P57071 1507 aaPredicted RBP8.14□□□□□ -1.11
CHD6-203ENST00000373233 PHF14O94880 888 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 IDI1Q13907 227 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 COG3Q96JB2 828 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 TSPYL1Q9H0U9 437 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 UGGT1Q9NYU2 1555 aa8.14□□□□□ -1.11
CHD6-203ENST00000373233 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
CHD6-203ENST00000373233 NSD3Q9BZ95 1437 aa8.13□□□□□ -1.11
CHD6-203ENST00000373233 COL17A1Q9UMD9 1497 aaPredicted RBP8.13□□□□□ -1.11
CHD6-203ENST00000373233 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
CHD6-203ENST00000373233 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
CHD6-203ENST00000373233 YEATS2Q9ULM3 1422 aa8.13□□□□□ -1.11
CHD6-203ENST00000373233 CLTCQ00610 1675 aaKnown RBP8.13□□□□□ -1.11
CHD6-203ENST00000373233 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
CHD6-203ENST00000373233 ZC3H13Q5T200 1668 aaKnown RBP8.13□□□□□ -1.11
CHD6-203ENST00000373233 CDK19Q9BWU1 502 aa8.12□□□□□ -1.11
CHD6-203ENST00000373233 ATAD2Q6PL18 1390 aa8.12□□□□□ -1.11
CHD6-203ENST00000373233 MADDQ8WXG6 1647 aa8.12□□□□□ -1.11
CHD6-203ENST00000373233 NAP1L2Q9ULW6 460 aaPredicted RBP8.12□□□□□ -1.11
CHD6-203ENST00000373233 ASXL1Q8IXJ9 1541 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 R3HCC1Q9Y3T6 440 aaKnown RBP8.11□□□□□ -1.11
CHD6-203ENST00000373233 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
CHD6-203ENST00000373233 C14orf93Q9H972 538 aaKnown RBP8.11□□□□□ -1.11
CHD6-203ENST00000373233 BCORL1Q5H9F3 1711 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 CALD1Q05682 793 aaKnown RBP8.11□□□□□ -1.11
CHD6-203ENST00000373233 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
CHD6-203ENST00000373233 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 DIP2CQ9Y2E4 1556 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 PRDM10Q9NQV6 1147 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 MAP3K4Q9Y6R4 1608 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 MAGI2Q86UL8 1455 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 NPATQ14207 1427 aa8.11□□□□□ -1.11
CHD6-203ENST00000373233 MS4A1P11836 297 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 QRICH2Q9H0J4 1663 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 E9PSI1 815 aa8.1□□□□□ -1.11
CHD6-203ENST00000373233 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms