RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 NAP1L5Q96NT1 182 aaPredicted RBP30.27■■■□□ 2.44
CCND3-202ENST00000372988 WDR63Q8IWG1 891 aa30.26■■■□□ 2.43
CCND3-202ENST00000372988 RUNDC1Q96C34 613 aa30.26■■■□□ 2.43
CCND3-202ENST00000372988 C22orf23Q9BZE7 217 aa30.25■■■□□ 2.43
CCND3-202ENST00000372988 KANK1Q14678 1352 aa30.24■■■□□ 2.43
CCND3-202ENST00000372988 ZNF692Q9BU19 519 aaPredicted RBP30.22■■■□□ 2.43
CCND3-202ENST00000372988 GLIPR1L2Q4G1C9 344 aa30.21■■■□□ 2.43
CCND3-202ENST00000372988 TCP11L2Q8N4U5 519 aa30.2■■■□□ 2.43
CCND3-202ENST00000372988 RRP7AQ9Y3A4 280 aaKnown RBP30.2■■■□□ 2.43
CCND3-202ENST00000372988 MVPQ14764 893 aaKnown RBP30.2■■■□□ 2.42
CCND3-202ENST00000372988 NEUROD2Q15784 382 aa30.19■■■□□ 2.42
CCND3-202ENST00000372988 ISY1Q9ULR0 285 aaKnown RBP30.19■■■□□ 2.42
CCND3-202ENST00000372988 NEURL4Q96JN8 1562 aa30.19■■■□□ 2.42
CCND3-202ENST00000372988 CCDC27Q2M243 656 aa30.19■■■□□ 2.42
CCND3-202ENST00000372988 BCL2L13Q9BXK5 485 aa30.19■■■□□ 2.42
CCND3-202ENST00000372988 NCOA3Q9Y6Q9 1424 aa30.18■■■□□ 2.42
CCND3-202ENST00000372988 DDX11L8A8MPP1 907 aa30.17■■■□□ 2.42
CCND3-202ENST00000372988 GRPEL1Q9HAV7 217 aa30.17■■■□□ 2.42
CCND3-202ENST00000372988 DDIT3P35638 169 aa30.16■■■□□ 2.42
CCND3-202ENST00000372988 MFAP1P55081 439 aaKnown RBP30.16■■■□□ 2.42
CCND3-202ENST00000372988 RRP9O43818 475 aaKnown RBP30.15■■■□□ 2.42
CCND3-202ENST00000372988 HSP90AA1P07900 732 aaKnown RBP30.15■■■□□ 2.42
CCND3-202ENST00000372988 ABCA6Q8N139 1617 aa30.15■■■□□ 2.42
CCND3-202ENST00000372988 MYO3AQ8NEV4 1616 aa30.14■■■□□ 2.42
CCND3-202ENST00000372988 MAP3K4Q9Y6R4 1608 aa30.14■■■□□ 2.42
CCND3-202ENST00000372988 SHROOM2Q13796 1616 aa30.13■■■□□ 2.41
CCND3-202ENST00000372988 MYOM2P54296 1465 aa30.13■■■□□ 2.41
CCND3-202ENST00000372988 SBNO2Q9Y2G9 1366 aa30.13■■■□□ 2.41
CCND3-202ENST00000372988 NCBP3Q53F19 620 aaKnown RBP30.13■■■□□ 2.41
CCND3-202ENST00000372988 CFAP70Q5T0N1 1121 aa30.13■■■□□ 2.41
CCND3-202ENST00000372988 MYH16Q9H6N6 1097 aa30.13■■■□□ 2.41
CCND3-202ENST00000372988 TET3O43151 1660 aa30.12■■■□□ 2.41
CCND3-202ENST00000372988 HSCBQ8IWL3 235 aa30.11■■■□□ 2.41
CCND3-202ENST00000372988 ABCC1P33527 1531 aa30.11■■■□□ 2.41
CCND3-202ENST00000372988 DEPDC5O75140 1603 aa30.11■■■□□ 2.41
CCND3-202ENST00000372988 HSP90AA2PQ14568 343 aaPredicted RBP30.11■■■□□ 2.41
CCND3-202ENST00000372988 MORC1Q86VD1 984 aa30.11■■■□□ 2.41
CCND3-202ENST00000372988 PLCH2O75038 1416 aa30.11■■■□□ 2.41
CCND3-202ENST00000372988 ESPNB1AK53 854 aa30.1■■■□□ 2.41
CCND3-202ENST00000372988 HDAC1Q13547 482 aaPredicted RBP30.1■■■□□ 2.41
CCND3-202ENST00000372988 ZKSCAN2Q63HK3 967 aa30.1■■■□□ 2.41
CCND3-202ENST00000372988 TRAPPC8Q9Y2L5 1435 aa30.1■■■□□ 2.41
CCND3-202ENST00000372988 NSD3Q9BZ95 1437 aa30.1■■■□□ 2.41
CCND3-202ENST00000372988 DZIP1LQ8IYY4 767 aaKnown RBP30.08■■■□□ 2.41
CCND3-202ENST00000372988 ZNF518AQ6AHZ1 1483 aa30.08■■■□□ 2.41
CCND3-202ENST00000372988 ERBB4Q15303 1308 aa30.08■■■□□ 2.41
CCND3-202ENST00000372988 PKNOX2Q96KN3 472 aa30.07■■■□□ 2.4
CCND3-202ENST00000372988 SNX21Q969T3 373 aa30.06■■■□□ 2.4
CCND3-202ENST00000372988 RBM25P49756 843 aaKnown RBP30.04■■■□□ 2.4
CCND3-202ENST00000372988 ADGRF5Q8IZF2 1346 aa30.04■■■□□ 2.4
CCND3-202ENST00000372988 FTSJ3Q8IY81 847 aaKnown RBP30.04■■■□□ 2.4
CCND3-202ENST00000372988 CT47B1P0C2W7 299 aaPredicted RBP30.03■■■□□ 2.4
CCND3-202ENST00000372988 VWDEQ8N2E2 1590 aa30.03■■■□□ 2.4
CCND3-202ENST00000372988 EFCAB2Q5VUJ9 269 aa30.02■■■□□ 2.4
CCND3-202ENST00000372988 SMC5Q8IY18 1101 aa30.02■■■□□ 2.4
CCND3-202ENST00000372988 USP32Q8NFA0 1604 aa30.02■■■□□ 2.4
CCND3-202ENST00000372988 ADGRB2O60241 1585 aa30.01■■■□□ 2.4
CCND3-202ENST00000372988 CIZ1Q9ULV3 898 aaPredicted RBP30.01■■■□□ 2.39
CCND3-202ENST00000372988 TNNT2P45379 298 aaPredicted RBP30.01■■■□□ 2.39
CCND3-202ENST00000372988 TNPO1Q92973 898 aaKnown RBP30.01■■■□□ 2.39
CCND3-202ENST00000372988 IFT172Q9UG01 1749 aa30■■■□□ 2.39
CCND3-202ENST00000372988 ZFYVE16Q7Z3T8 1539 aa30■■■□□ 2.39
CCND3-202ENST00000372988 ADGRL1O94910 1474 aa29.99■■■□□ 2.39
CCND3-202ENST00000372988 NRXN1Q9ULB1 1477 aa29.99■■■□□ 2.39
CCND3-202ENST00000372988 GAS2L3Q86XJ1 694 aa29.99■■■□□ 2.39
CCND3-202ENST00000372988 MTHFSP49914 203 aa29.98■■■□□ 2.39
CCND3-202ENST00000372988 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
CCND3-202ENST00000372988 VSIG10Q8N0Z9 540 aa29.97■■■□□ 2.39
CCND3-202ENST00000372988 DDX19BQ9UMR2 479 aa29.97■■■□□ 2.39
CCND3-202ENST00000372988 TRIM27P14373 513 aa29.96■■■□□ 2.39
CCND3-202ENST00000372988 RAB3GAP1Q15042 981 aa29.96■■■□□ 2.39
CCND3-202ENST00000372988 CFAP53Q96M91 514 aa29.96■■■□□ 2.39
CCND3-202ENST00000372988 SKOR2Q2VWA4 1001 aaPredicted RBP29.95■■■□□ 2.38
CCND3-202ENST00000372988 ZMYND15Q9H091 742 aa29.95■■■□□ 2.38
CCND3-202ENST00000372988 ZC3H13Q5T200 1668 aaKnown RBP29.94■■■□□ 2.38
CCND3-202ENST00000372988 GBP4Q96PP9 640 aa29.94■■■□□ 2.38
CCND3-202ENST00000372988 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
CCND3-202ENST00000372988 TRIM44Q96DX7 344 aaPredicted RBP29.93■■■□□ 2.38
CCND3-202ENST00000372988 SLC12A5Q9H2X9 1139 aa29.93■■■□□ 2.38
CCND3-202ENST00000372988 SMC4Q9NTJ3 1288 aa29.93■■■□□ 2.38
CCND3-202ENST00000372988 SETBP1Q9Y6X0 1596 aa29.92■■■□□ 2.38
CCND3-202ENST00000372988 PTMSP20962 102 aa29.92■■■□□ 2.38
CCND3-202ENST00000372988 ATF7IPQ6VMQ6 1270 aa29.9■■■□□ 2.38
CCND3-202ENST00000372988 ITPRIPQ8IWB1 547 aa29.9■■■□□ 2.38
CCND3-202ENST00000372988 KIF1BO60333 1816 aa29.9■■■□□ 2.38
CCND3-202ENST00000372988 TPM2P07951 284 aa29.9■■■□□ 2.38
CCND3-202ENST00000372988 TSR2Q969E8 191 aaKnown RBP29.9■■■□□ 2.38
CCND3-202ENST00000372988 SSH1Q8WYL5 1049 aa29.89■■■□□ 2.38
CCND3-202ENST00000372988 INO80Q9ULG1 1556 aaPredicted RBP29.89■■■□□ 2.38
CCND3-202ENST00000372988 NUCB1Q02818 461 aa29.89■■■□□ 2.37
CCND3-202ENST00000372988 EXOSC9Q06265 439 aaKnown RBP29.89■■■□□ 2.37
CCND3-202ENST00000372988 ZBTB40Q9NUA8 1239 aa29.88■■■□□ 2.37
CCND3-202ENST00000372988 MROH2AA6NES4 1674 aa29.87■■■□□ 2.37
CCND3-202ENST00000372988 HSP90AB1P08238 724 aaKnown RBP29.87■■■□□ 2.37
CCND3-202ENST00000372988 KIF2CQ99661 725 aa29.87■■■□□ 2.37
CCND3-202ENST00000372988 AFAP1Q8N556 730 aa29.86■■■□□ 2.37
CCND3-202ENST00000372988 QRICH2Q9H0J4 1663 aa29.86■■■□□ 2.37
CCND3-202ENST00000372988 U2AF1L5P0DN76 240 aaPredicted RBP29.86■■■□□ 2.37
CCND3-202ENST00000372988 U2AF1Q01081 240 aaKnown RBP eCLIP29.86■■■□□ 2.37
CCND3-202ENST00000372988 NOS1P29475 1434 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms