RNA–Protein interactions for RNA: ENST00000372833.5

CHCHD1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD1, Length 835 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-201ENST00000372833 UPF1Q92900 1129 aaKnown RBP eCLIP26.29■■□□□ 1.8
CHCHD1-201ENST00000372833 SPATA31E1Q6ZUB1 1445 aa26.28■■□□□ 1.8
CHCHD1-201ENST00000372833 CDK12Q9NYV4 1490 aaPredicted RBP26.28■■□□□ 1.8
CHCHD1-201ENST00000372833 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
CHCHD1-201ENST00000372833 NPHP3Q7Z494 1330 aa26.27■■□□□ 1.8
CHCHD1-201ENST00000372833 CDC42BPGQ6DT37 1551 aa26.27■■□□□ 1.8
CHCHD1-201ENST00000372833 LAMC1P11047 1609 aa26.27■■□□□ 1.8
CHCHD1-201ENST00000372833 RBM6P78332 1123 aaKnown RBP26.26■■□□□ 1.79
CHCHD1-201ENST00000372833 TMEM132EQ6IEE7 984 aa26.26■■□□□ 1.79
CHCHD1-201ENST00000372833 WAPLQ7Z5K2 1190 aa26.26■■□□□ 1.79
CHCHD1-201ENST00000372833 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
CHCHD1-201ENST00000372833 ACIN1Q9UKV3 1341 aaKnown RBP26.24■■□□□ 1.79
CHCHD1-201ENST00000372833 FOXO3O43524 673 aa26.22■■□□□ 1.79
CHCHD1-201ENST00000372833 XPCQ01831 940 aaPredicted RBP26.22■■□□□ 1.79
CHCHD1-201ENST00000372833 USP21Q9UK80 565 aa26.22■■□□□ 1.79
CHCHD1-201ENST00000372833 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
CHCHD1-201ENST00000372833 TECPR2O15040 1411 aa26.22■■□□□ 1.79
CHCHD1-201ENST00000372833 PIK3C2GO75747 1445 aa26.21■■□□□ 1.79
CHCHD1-201ENST00000372833 ABCC11Q96J66 1382 aa26.2■■□□□ 1.79
CHCHD1-201ENST00000372833 RGS12O14924 1447 aa26.2■■□□□ 1.78
CHCHD1-201ENST00000372833 PLEKHH1Q9ULM0 1364 aa26.18■■□□□ 1.78
CHCHD1-201ENST00000372833 YTHDC2Q9H6S0 1430 aaKnown RBP26.17■■□□□ 1.78
CHCHD1-201ENST00000372833 TRPC5Q9UL62 973 aaPredicted RBP26.17■■□□□ 1.78
CHCHD1-201ENST00000372833 KNDC1Q76NI1 1749 aa26.16■■□□□ 1.78
CHCHD1-201ENST00000372833 PXDNQ92626 1479 aa26.15■■□□□ 1.78
CHCHD1-201ENST00000372833 COL22A1Q8NFW1 1626 aaPredicted RBP26.14■■□□□ 1.78
CHCHD1-201ENST00000372833 DHX57Q6P158 1386 aaKnown RBP26.13■■□□□ 1.77
CHCHD1-201ENST00000372833 MYOM2P54296 1465 aa26.11■■□□□ 1.77
CHCHD1-201ENST00000372833 CFAP70Q5T0N1 1121 aa26.11■■□□□ 1.77
CHCHD1-201ENST00000372833 FNBP4Q8N3X1 1017 aaPredicted RBP26.11■■□□□ 1.77
CHCHD1-201ENST00000372833 C14orf93Q9H972 538 aaKnown RBP26.11■■□□□ 1.77
CHCHD1-201ENST00000372833 RAB3GAP2Q9H2M9 1393 aa26.1■■□□□ 1.77
CHCHD1-201ENST00000372833 SAFB2Q14151 953 aaKnown RBP eCLIP26.1■■□□□ 1.77
CHCHD1-201ENST00000372833 FMN2Q9NZ56 1722 aa26.09■■□□□ 1.77
CHCHD1-201ENST00000372833 KIF1AQ12756 1690 aa26.07■■□□□ 1.76
CHCHD1-201ENST00000372833 HAP1P54257 671 aaPredicted RBP26.07■■□□□ 1.76
CHCHD1-201ENST00000372833 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
CHCHD1-201ENST00000372833 ATAD2Q6PL18 1390 aa26.07■■□□□ 1.76
CHCHD1-201ENST00000372833 KRT28Q7Z3Y7 464 aa26.06■■□□□ 1.76
CHCHD1-201ENST00000372833 PRAM1Q96QH2 718 aa26.06■■□□□ 1.76
CHCHD1-201ENST00000372833 POGKQ9P215 609 aa26.06■■□□□ 1.76
CHCHD1-201ENST00000372833 ATRNO75882 1429 aa26.05■■□□□ 1.76
CHCHD1-201ENST00000372833 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
CHCHD1-201ENST00000372833 PLEKHG5O94827 1062 aa26.04■■□□□ 1.76
CHCHD1-201ENST00000372833 PHF8Q9UPP1 1060 aa26.04■■□□□ 1.76
CHCHD1-201ENST00000372833 SPATA31A3Q5VYP0 1347 aa26.04■■□□□ 1.76
CHCHD1-201ENST00000372833 PSME1Q06323 249 aa26.03■■□□□ 1.76
CHCHD1-201ENST00000372833 LMOD2Q6P5Q4 547 aa26.02■■□□□ 1.76
CHCHD1-201ENST00000372833 MARF1Q9Y4F3 1742 aaKnown RBP26.01■■□□□ 1.75
CHCHD1-201ENST00000372833 BCL9LQ86UU0 1499 aa26■■□□□ 1.75
CHCHD1-201ENST00000372833 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
CHCHD1-201ENST00000372833 GJD4Q96KN9 370 aaPredicted RBP25.98■■□□□ 1.75
CHCHD1-201ENST00000372833 TNS3Q68CZ2 1445 aa25.97■■□□□ 1.75
CHCHD1-201ENST00000372833 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
CHCHD1-201ENST00000372833 TRAK1Q9UPV9 953 aa25.97■■□□□ 1.75
CHCHD1-201ENST00000372833 RGPD8O14715 1765 aaPredicted RBP25.95■■□□□ 1.75
CHCHD1-201ENST00000372833 UNC5CLQ8IV45 518 aa25.95■■□□□ 1.74
CHCHD1-201ENST00000372833 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.74
CHCHD1-201ENST00000372833 DLC1Q96QB1 1528 aa25.94■■□□□ 1.74
CHCHD1-201ENST00000372833 HIRIP3Q9BW71 556 aaPredicted RBP25.94■■□□□ 1.74
CHCHD1-201ENST00000372833 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
CHCHD1-201ENST00000372833 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
CHCHD1-201ENST00000372833 MINK1Q8N4C8 1332 aaPredicted RBP25.91■■□□□ 1.74
CHCHD1-201ENST00000372833 SBNO1A3KN83 1393 aa25.91■■□□□ 1.74
CHCHD1-201ENST00000372833 ARHGEF10O15013 1369 aa25.91■■□□□ 1.74
CHCHD1-201ENST00000372833 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
CHCHD1-201ENST00000372833 SLIT2O94813 1529 aa25.9■■□□□ 1.74
CHCHD1-201ENST00000372833 CCDC9Q9Y3X0 531 aaKnown RBP25.9■■□□□ 1.74
CHCHD1-201ENST00000372833 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.9■■□□□ 1.74
CHCHD1-201ENST00000372833 ADGRB1O14514 1584 aa25.89■■□□□ 1.73
CHCHD1-201ENST00000372833 RALGAPBQ86X10 1494 aa25.88■■□□□ 1.73
CHCHD1-201ENST00000372833 EIF3AQ14152 1382 aaKnown RBP25.88■■□□□ 1.73
CHCHD1-201ENST00000372833 GPRASP1Q5JY77 1395 aa25.87■■□□□ 1.73
CHCHD1-201ENST00000372833 ADGRB2O60241 1585 aa25.86■■□□□ 1.73
CHCHD1-201ENST00000372833 CCDC125Q86Z20 511 aa25.85■■□□□ 1.73
CHCHD1-201ENST00000372833 STAC3Q96MF2 364 aa25.85■■□□□ 1.73
CHCHD1-201ENST00000372833 GLI3P10071 1580 aa25.83■■□□□ 1.73
CHCHD1-201ENST00000372833 A0A0G2JS52 829 aa25.82■■□□□ 1.72
CHCHD1-201ENST00000372833 WASLO00401 505 aaPredicted RBP25.82■■□□□ 1.72
CHCHD1-201ENST00000372833 MYT1Q01538 1121 aa25.82■■□□□ 1.72
CHCHD1-201ENST00000372833 NGDNQ8NEJ9 315 aaKnown RBP25.82■■□□□ 1.72
CHCHD1-201ENST00000372833 ZRANB1Q9UGI0 708 aa25.82■■□□□ 1.72
CHCHD1-201ENST00000372833 HRCP23327 699 aa25.81■■□□□ 1.72
CHCHD1-201ENST00000372833 VPS72Q15906 364 aa25.81■■□□□ 1.72
CHCHD1-201ENST00000372833 TULP4Q9NRJ4 1543 aa25.81■■□□□ 1.72
CHCHD1-201ENST00000372833 PLCH1Q4KWH8 1693 aa25.8■■□□□ 1.72
CHCHD1-201ENST00000372833 PAK3O75914 559 aaPredicted RBP25.8■■□□□ 1.72
CHCHD1-201ENST00000372833 SEPT12Q8IYM1 358 aa25.8■■□□□ 1.72
CHCHD1-201ENST00000372833 ABCA3Q99758 1704 aa25.79■■□□□ 1.72
CHCHD1-201ENST00000372833 PRR36Q9H6K5 1346 aa25.78■■□□□ 1.72
CHCHD1-201ENST00000372833 NWD2Q9ULI1 1742 aa25.77■■□□□ 1.72
CHCHD1-201ENST00000372833 FAM83GA6ND36 823 aa25.77■■□□□ 1.72
CHCHD1-201ENST00000372833 SF3B2Q13435 895 aaKnown RBP25.77■■□□□ 1.72
CHCHD1-201ENST00000372833 BLMP54132 1417 aaPredicted RBP25.74■■□□□ 1.71
CHCHD1-201ENST00000372833 BTG4Q9NY30 223 aa25.74■■□□□ 1.71
CHCHD1-201ENST00000372833 TRPM3Q9HCF6 1732 aaPredicted RBP25.74■■□□□ 1.71
CHCHD1-201ENST00000372833 KRT27Q7Z3Y8 459 aa25.72■■□□□ 1.71
CHCHD1-201ENST00000372833 ARHGEF28Q8N1W1 1705 aaKnown RBP25.71■■□□□ 1.71
CHCHD1-201ENST00000372833 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.71
CHCHD1-201ENST00000372833 EP400Q96L91 3159 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms