RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 AFF2P51816 1311 aa15.01□□□□□ -0.01
COL5A1-202ENST00000371820 CDC42BPGQ6DT37 1551 aa15.01□□□□□ -0.01
COL5A1-202ENST00000371820 RXRBP28702 533 aa14.99□□□□□ -0.01
COL5A1-202ENST00000371820 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
COL5A1-202ENST00000371820 SOS2Q07890 1332 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-202ENST00000371820 TECPR2O15040 1411 aa14.98□□□□□ -0.01
COL5A1-202ENST00000371820 ADGRF5Q8IZF2 1346 aa14.97□□□□□ -0.01
COL5A1-202ENST00000371820 MYOM2P54296 1465 aa14.97□□□□□ -0.01
COL5A1-202ENST00000371820 COL22A1Q8NFW1 1626 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-202ENST00000371820 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
COL5A1-202ENST00000371820 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
COL5A1-202ENST00000371820 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
COL5A1-202ENST00000371820 UPF1Q92900 1129 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL5A1-202ENST00000371820 C8orf37Q96NL8 207 aa14.96□□□□□ -0.01
COL5A1-202ENST00000371820 RGS12O14924 1447 aa14.95□□□□□ -0.02
COL5A1-202ENST00000371820 LRPPRCP42704 1394 aaKnown RBP14.94□□□□□ -0.02
COL5A1-202ENST00000371820 PXDNQ92626 1479 aa14.94□□□□□ -0.02
COL5A1-202ENST00000371820 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
COL5A1-202ENST00000371820 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
COL5A1-202ENST00000371820 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
COL5A1-202ENST00000371820 RBM6P78332 1123 aaKnown RBP14.92□□□□□ -0.02
COL5A1-202ENST00000371820 ABCC11Q96J66 1382 aa14.92□□□□□ -0.02
COL5A1-202ENST00000371820 NPHP3Q7Z494 1330 aa14.92□□□□□ -0.02
COL5A1-202ENST00000371820 ADAMTS2O95450 1211 aa14.91□□□□□ -0.02
COL5A1-202ENST00000371820 QTRT2Q9H974 415 aaKnown RBP14.91□□□□□ -0.02
COL5A1-202ENST00000371820 FMN2Q9NZ56 1722 aa14.9□□□□□ -0.02
COL5A1-202ENST00000371820 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-202ENST00000371820 NGLY1Q96IV0 654 aa14.9□□□□□ -0.02
COL5A1-202ENST00000371820 C14orf93Q9H972 538 aaKnown RBP14.9□□□□□ -0.02
COL5A1-202ENST00000371820 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
COL5A1-202ENST00000371820 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
COL5A1-202ENST00000371820 PLEKHH1Q9ULM0 1364 aa14.89□□□□□ -0.03
COL5A1-202ENST00000371820 ESCO1Q5FWF5 840 aa14.89□□□□□ -0.03
COL5A1-202ENST00000371820 WAPLQ7Z5K2 1190 aa14.89□□□□□ -0.03
COL5A1-202ENST00000371820 STK26Q9P289 416 aa14.89□□□□□ -0.03
COL5A1-202ENST00000371820 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
COL5A1-202ENST00000371820 MARF1Q9Y4F3 1742 aaKnown RBP14.88□□□□□ -0.03
COL5A1-202ENST00000371820 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
COL5A1-202ENST00000371820 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
COL5A1-202ENST00000371820 FNBP4Q8N3X1 1017 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-202ENST00000371820 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
COL5A1-202ENST00000371820 ATRNO75882 1429 aa14.86□□□□□ -0.03
COL5A1-202ENST00000371820 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-202ENST00000371820 USP21Q9UK80 565 aa14.86□□□□□ -0.03
COL5A1-202ENST00000371820 FOXO3O43524 673 aa14.85□□□□□ -0.03
COL5A1-202ENST00000371820 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-202ENST00000371820 CFAP70Q5T0N1 1121 aa14.85□□□□□ -0.03
COL5A1-202ENST00000371820 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
COL5A1-202ENST00000371820 TRPC5Q9UL62 973 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-202ENST00000371820 DLC1Q96QB1 1528 aa14.84□□□□□ -0.03
COL5A1-202ENST00000371820 NUTM2FA1L443 756 aa14.84□□□□□ -0.03
COL5A1-202ENST00000371820 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
COL5A1-202ENST00000371820 KDM2AQ9Y2K7 1162 aa14.83□□□□□ -0.04
COL5A1-202ENST00000371820 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.83□□□□□ -0.04
COL5A1-202ENST00000371820 ATAD2Q6PL18 1390 aa14.82□□□□□ -0.04
COL5A1-202ENST00000371820 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
COL5A1-202ENST00000371820 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
COL5A1-202ENST00000371820 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-202ENST00000371820 POGKQ9P215 609 aa14.8□□□□□ -0.04
COL5A1-202ENST00000371820 SPATA31A3Q5VYP0 1347 aa14.8□□□□□ -0.04
COL5A1-202ENST00000371820 ADGRB2O60241 1585 aa14.8□□□□□ -0.04
COL5A1-202ENST00000371820 SLIT2O94813 1529 aa14.79□□□□□ -0.04
COL5A1-202ENST00000371820 TNS3Q68CZ2 1445 aa14.79□□□□□ -0.04
COL5A1-202ENST00000371820 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
COL5A1-202ENST00000371820 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
COL5A1-202ENST00000371820 EIF3AQ14152 1382 aaKnown RBP14.77□□□□□ -0.04
COL5A1-202ENST00000371820 KRT28Q7Z3Y7 464 aa14.77□□□□□ -0.05
COL5A1-202ENST00000371820 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.05
COL5A1-202ENST00000371820 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
COL5A1-202ENST00000371820 ANKARQ7Z5J8 1434 aa14.76□□□□□ -0.05
COL5A1-202ENST00000371820 GLI3P10071 1580 aa14.76□□□□□ -0.05
COL5A1-202ENST00000371820 SBNO1A3KN83 1393 aa14.75□□□□□ -0.05
COL5A1-202ENST00000371820 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
COL5A1-202ENST00000371820 TRAK1Q9UPV9 953 aa14.75□□□□□ -0.05
COL5A1-202ENST00000371820 RALGAPBQ86X10 1494 aa14.75□□□□□ -0.05
COL5A1-202ENST00000371820 SAFB2Q14151 953 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL5A1-202ENST00000371820 UNC5CLQ8IV45 518 aa14.74□□□□□ -0.05
COL5A1-202ENST00000371820 EP400Q96L91 3159 aa14.74□□□□□ -0.05
COL5A1-202ENST00000371820 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
COL5A1-202ENST00000371820 NWD2Q9ULI1 1742 aa14.73□□□□□ -0.05
COL5A1-202ENST00000371820 PSME1Q06323 249 aa14.73□□□□□ -0.05
COL5A1-202ENST00000371820 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
COL5A1-202ENST00000371820 ARHGEF28Q8N1W1 1705 aaKnown RBP14.72□□□□□ -0.05
COL5A1-202ENST00000371820 TRPM3Q9HCF6 1732 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-202ENST00000371820 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.06
COL5A1-202ENST00000371820 ALS2Q96Q42 1657 aa14.7□□□□□ -0.06
COL5A1-202ENST00000371820 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
COL5A1-202ENST00000371820 CABLES1Q8TDN4 633 aa14.69□□□□□ -0.06
COL5A1-202ENST00000371820 BRWD3Q6RI45 1802 aa14.69□□□□□ -0.06
COL5A1-202ENST00000371820 MINK1Q8N4C8 1332 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-202ENST00000371820 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
COL5A1-202ENST00000371820 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
COL5A1-202ENST00000371820 NRAPQ86VF7 1730 aa14.68□□□□□ -0.06
COL5A1-202ENST00000371820 PRR36Q9H6K5 1346 aa14.67□□□□□ -0.06
COL5A1-202ENST00000371820 WASLO00401 505 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-202ENST00000371820 VPS72Q15906 364 aa14.67□□□□□ -0.06
COL5A1-202ENST00000371820 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-202ENST00000371820 ITSN1Q15811 1721 aa14.66□□□□□ -0.06
COL5A1-202ENST00000371820 CRYBG1Q9Y4K1 1723 aa14.66□□□□□ -0.06
COL5A1-202ENST00000371820 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms