RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
LRRC40-201ENST00000370952 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
LRRC40-201ENST00000370952 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
LRRC40-201ENST00000370952 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
LRRC40-201ENST00000370952 CEP152O94986 1710 aa12.17□□□□□ -0.46
LRRC40-201ENST00000370952 RSPH4AQ5TD94 716 aa12.16□□□□□ -0.46
LRRC40-201ENST00000370952 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
LRRC40-201ENST00000370952 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
LRRC40-201ENST00000370952 PREX2Q70Z35 1606 aa12.15□□□□□ -0.46
LRRC40-201ENST00000370952 AAMPQ13685 434 aa12.15□□□□□ -0.46
LRRC40-201ENST00000370952 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
LRRC40-201ENST00000370952 ATP10AO60312 1499 aa12.14□□□□□ -0.47
LRRC40-201ENST00000370952 DDIT3P35638 169 aa12.14□□□□□ -0.47
LRRC40-201ENST00000370952 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
LRRC40-201ENST00000370952 POLR3AO14802 1390 aaPredicted RBP12.14□□□□□ -0.47
LRRC40-201ENST00000370952 ARHGAP5Q13017 1502 aa12.14□□□□□ -0.47
LRRC40-201ENST00000370952 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
LRRC40-201ENST00000370952 AK9Q5TCS8 1911 aa12.14□□□□□ -0.47
LRRC40-201ENST00000370952 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 TPM2P07951 284 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
LRRC40-201ENST00000370952 ISY1Q9ULR0 285 aaKnown RBP12.13□□□□□ -0.47
LRRC40-201ENST00000370952 NCOA3Q9Y6Q9 1424 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 CFAP70Q5T0N1 1121 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
LRRC40-201ENST00000370952 RBM10P98175 930 aaKnown RBP12.12□□□□□ -0.47
LRRC40-201ENST00000370952 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
LRRC40-201ENST00000370952 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
LRRC40-201ENST00000370952 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
LRRC40-201ENST00000370952 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 SMC4Q9NTJ3 1288 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 PHF23Q9BUL5 403 aaPredicted RBP12.11□□□□□ -0.47
LRRC40-201ENST00000370952 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
LRRC40-201ENST00000370952 TRIM27P14373 513 aa12.1□□□□□ -0.47
LRRC40-201ENST00000370952 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
LRRC40-201ENST00000370952 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
LRRC40-201ENST00000370952 TTC37Q6PGP7 1564 aa12.1□□□□□ -0.47
LRRC40-201ENST00000370952 SSFA2P28290 1259 aa12.1□□□□□ -0.47
LRRC40-201ENST00000370952 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
LRRC40-201ENST00000370952 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
LRRC40-201ENST00000370952 RBM25P49756 843 aaKnown RBP12.09□□□□□ -0.47
LRRC40-201ENST00000370952 MTHFSP49914 203 aa12.09□□□□□ -0.47
LRRC40-201ENST00000370952 EXOSC9Q06265 439 aaKnown RBP12.09□□□□□ -0.47
LRRC40-201ENST00000370952 SNX21Q969T3 373 aa12.09□□□□□ -0.47
LRRC40-201ENST00000370952 CCDC173Q0VFZ6 552 aa12.08□□□□□ -0.47
LRRC40-201ENST00000370952 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.47
LRRC40-201ENST00000370952 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.47
LRRC40-201ENST00000370952 DUOX2Q9NRD8 1548 aa12.08□□□□□ -0.48
LRRC40-201ENST00000370952 ZSCAN30Q86W11 494 aa12.08□□□□□ -0.48
LRRC40-201ENST00000370952 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
LRRC40-201ENST00000370952 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
LRRC40-201ENST00000370952 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
LRRC40-201ENST00000370952 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
LRRC40-201ENST00000370952 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
LRRC40-201ENST00000370952 CLTCL1P53675 1640 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 MSNP26038 577 aaKnown RBP12.07□□□□□ -0.48
LRRC40-201ENST00000370952 RIPK4P57078 832 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 TMEM57Q8N5G2 664 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 KIF2CQ99661 725 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 ARID3AQ99856 593 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
LRRC40-201ENST00000370952 PPP1R9BQ96SB3 815 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 DDX19BQ9UMR2 479 aa12.07□□□□□ -0.48
LRRC40-201ENST00000370952 OFD1O75665 1012 aa12.06□□□□□ -0.48
LRRC40-201ENST00000370952 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
LRRC40-201ENST00000370952 NOB1Q9ULX3 412 aaKnown RBP12.06□□□□□ -0.48
LRRC40-201ENST00000370952 R3HCC1Q9Y3T6 440 aaKnown RBP12.06□□□□□ -0.48
LRRC40-201ENST00000370952 ADGRF5Q8IZF2 1346 aa12.06□□□□□ -0.48
LRRC40-201ENST00000370952 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
LRRC40-201ENST00000370952 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
LRRC40-201ENST00000370952 NCLP19338 710 aaKnown RBP12.05□□□□□ -0.48
LRRC40-201ENST00000370952 ATF7IPQ6VMQ6 1270 aa12.05□□□□□ -0.48
LRRC40-201ENST00000370952 SHROOM2Q13796 1616 aa12.05□□□□□ -0.48
LRRC40-201ENST00000370952 K7ELQ4 463 aaPredicted RBP12.04□□□□□ -0.48
LRRC40-201ENST00000370952 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
LRRC40-201ENST00000370952 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
LRRC40-201ENST00000370952 TRPM2O94759 1503 aa12.04□□□□□ -0.48
LRRC40-201ENST00000370952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.04□□□□□ -0.48
LRRC40-201ENST00000370952 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
LRRC40-201ENST00000370952 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
LRRC40-201ENST00000370952 NUCB1Q02818 461 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
LRRC40-201ENST00000370952 ZBTB40Q9NUA8 1239 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 KANK1Q14678 1352 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
LRRC40-201ENST00000370952 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
LRRC40-201ENST00000370952 PTPRTO14522 1441 aa12.02□□□□□ -0.48
LRRC40-201ENST00000370952 MCTP1Q6DN14 999 aa12.02□□□□□ -0.48
LRRC40-201ENST00000370952 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.48
LRRC40-201ENST00000370952 ABCA6Q8N139 1617 aa12.02□□□□□ -0.48
LRRC40-201ENST00000370952 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms