RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.22■■□□□ 1.315e-9■□□□□ 8
LMNA-205ENST00000368299 CGNL1Q0VF96 1302 aa23.22■■□□□ 1.31
LMNA-205ENST00000368299 POGKQ9P215 609 aa23.21■■□□□ 1.31
LMNA-205ENST00000368299 SALL2Q9Y467 1007 aaPredicted RBP23.21■■□□□ 1.31
LMNA-205ENST00000368299 NSD2O96028 1365 aa23.2■■□□□ 1.31
LMNA-205ENST00000368299 ATAD2Q6PL18 1390 aa23.2■■□□□ 1.31
LMNA-205ENST00000368299 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
LMNA-205ENST00000368299 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
LMNA-205ENST00000368299 POLR3AO14802 1390 aaPredicted RBP23.19■■□□□ 1.3
LMNA-205ENST00000368299 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
LMNA-205ENST00000368299 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
LMNA-205ENST00000368299 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
LMNA-205ENST00000368299 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
LMNA-205ENST00000368299 TNRQ92752 1358 aa23.18■■□□□ 1.3
LMNA-205ENST00000368299 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
LMNA-205ENST00000368299 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
LMNA-205ENST00000368299 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
LMNA-205ENST00000368299 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
LMNA-205ENST00000368299 SETD1AO15047 1707 aaKnown RBP23.14■■□□□ 1.3
LMNA-205ENST00000368299 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
LMNA-205ENST00000368299 MINK1Q8N4C8 1332 aaPredicted RBP23.14■■□□□ 1.29
LMNA-205ENST00000368299 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
LMNA-205ENST00000368299 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
LMNA-205ENST00000368299 CDCA7LQ96GN5 454 aa23.11■■□□□ 1.29
LMNA-205ENST00000368299 TERF2IPQ9NYB0 399 aa23.11■■□□□ 1.29
LMNA-205ENST00000368299 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
LMNA-205ENST00000368299 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
LMNA-205ENST00000368299 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
LMNA-205ENST00000368299 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
LMNA-205ENST00000368299 PLEKHH1Q9ULM0 1364 aa23.08■■□□□ 1.29
LMNA-205ENST00000368299 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
LMNA-205ENST00000368299 CDK19Q9BWU1 502 aa23.07■■□□□ 1.28
LMNA-205ENST00000368299 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
LMNA-205ENST00000368299 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
LMNA-205ENST00000368299 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
LMNA-205ENST00000368299 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
LMNA-205ENST00000368299 SIRT1Q96EB6 747 aa23.05■■□□□ 1.28
LMNA-205ENST00000368299 HDGFL2Q7Z4V5 671 aaPredicted RBP23.05■■□□□ 1.28
LMNA-205ENST00000368299 MED14O60244 1454 aa23.05■■□□□ 1.28
LMNA-205ENST00000368299 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
LMNA-205ENST00000368299 B4GALNT3Q6L9W6 998 aa23.03■■□□□ 1.28
LMNA-205ENST00000368299 CD163L1Q9NR16 1453 aa23.03■■□□□ 1.28
LMNA-205ENST00000368299 CCDC146Q8IYE0 955 aa23.03■■□□□ 1.28
LMNA-205ENST00000368299 TECPR2O15040 1411 aa23.03■■□□□ 1.28
LMNA-205ENST00000368299 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
LMNA-205ENST00000368299 MTHFSP49914 203 aa23.02■■□□□ 1.28
LMNA-205ENST00000368299 METP08581 1390 aa23.02■■□□□ 1.28
LMNA-205ENST00000368299 SHPRHQ149N8 1683 aa23.02■■□□□ 1.28
LMNA-205ENST00000368299 APAF1O14727 1248 aa23.02■■□□□ 1.28
LMNA-205ENST00000368299 KNDC1Q76NI1 1749 aa23.02■■□□□ 1.27
LMNA-205ENST00000368299 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
LMNA-205ENST00000368299 DUSP27Q5VZP5 1158 aa22.99■■□□□ 1.27
LMNA-205ENST00000368299 ATP7BP35670 1465 aa22.99■■□□□ 1.27
LMNA-205ENST00000368299 CABP1Q9NZU7 370 aa22.98■■□□□ 1.27
LMNA-205ENST00000368299 ANKRD26Q9UPS8 1709 aa22.98■■□□□ 1.27
LMNA-205ENST00000368299 CPS1P31327 1500 aa22.97■■□□□ 1.27
LMNA-205ENST00000368299 SLFN5Q08AF3 891 aa22.97■■□□□ 1.27
LMNA-205ENST00000368299 CCDC136Q96JN2 1154 aa22.97■■□□□ 1.27
LMNA-205ENST00000368299 PLEKHG1Q9ULL1 1385 aa22.96■■□□□ 1.27
LMNA-205ENST00000368299 FYB1O15117 783 aa22.96■■□□□ 1.27
LMNA-205ENST00000368299 RUNDC1Q96C34 613 aa22.96■■□□□ 1.27
LMNA-205ENST00000368299 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
LMNA-205ENST00000368299 TRMT2AQ8IZ69 625 aaKnown RBP22.96■■□□□ 1.27
LMNA-205ENST00000368299 E9PSI1 815 aa22.94■■□□□ 1.26
LMNA-205ENST00000368299 GGNBP2Q9H3C7 697 aa22.94■■□□□ 1.26
LMNA-205ENST00000368299 C3P01024 1663 aa22.93■■□□□ 1.26
LMNA-205ENST00000368299 TXNDC2Q86VQ3 553 aa22.93■■□□□ 1.26
LMNA-205ENST00000368299 ADAMTS13Q76LX8 1427 aa22.93■■□□□ 1.26
LMNA-205ENST00000368299 TRHP20396 242 aaPredicted RBP22.93■■□□□ 1.26
LMNA-205ENST00000368299 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
LMNA-205ENST00000368299 FER1L4A9Z1Z3 1794 aa22.92■■□□□ 1.26
LMNA-205ENST00000368299 EID1Q9Y6B2 187 aa22.92■■□□□ 1.26
LMNA-205ENST00000368299 CEBPAP49715 358 aaPredicted RBP22.91■■□□□ 1.26
LMNA-205ENST00000368299 KIF20BQ96Q89 1820 aa22.9■■□□□ 1.26
LMNA-205ENST00000368299 SLIT1O75093 1534 aa22.9■■□□□ 1.26
LMNA-205ENST00000368299 NKTRP30414 1462 aaKnown RBP22.9■■□□□ 1.26
LMNA-205ENST00000368299 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
LMNA-205ENST00000368299 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
LMNA-205ENST00000368299 LTKP29376 864 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 WWC1Q8IX03 1113 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 EXOC6Q8TAG9 804 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
LMNA-205ENST00000368299 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
LMNA-205ENST00000368299 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
LMNA-205ENST00000368299 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.87■■□□□ 1.25
LMNA-205ENST00000368299 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
LMNA-205ENST00000368299 CCDC61Q9Y6R9 512 aa22.86■■□□□ 1.25
LMNA-205ENST00000368299 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
LMNA-205ENST00000368299 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
LMNA-205ENST00000368299 PHF23Q9BUL5 403 aaPredicted RBP22.85■■□□□ 1.25
LMNA-205ENST00000368299 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
LMNA-205ENST00000368299 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
LMNA-205ENST00000368299 THEMISQ8N1K5 641 aaPredicted RBP22.84■■□□□ 1.25
LMNA-205ENST00000368299 ROBO2Q9HCK4 1378 aa22.84■■□□□ 1.25
LMNA-205ENST00000368299 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
LMNA-205ENST00000368299 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
LMNA-205ENST00000368299 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
LMNA-205ENST00000368299 CDC42BPGQ6DT37 1551 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms