RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 RNF17Q9BXT8 1623 aaKnown RBP17.42■□□□□ 0.38
PRKN-205ENST00000366897 MADDQ8WXG6 1647 aa17.41■□□□□ 0.38
PRKN-205ENST00000366897 PDE3AQ14432 1141 aa17.41■□□□□ 0.38
PRKN-205ENST00000366897 BECN1Q14457 450 aa17.41■□□□□ 0.38
PRKN-205ENST00000366897 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PRKN-205ENST00000366897 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
PRKN-205ENST00000366897 PTPRMP28827 1452 aa17.4■□□□□ 0.38
PRKN-205ENST00000366897 PDZRN3Q9UPQ7 1066 aa17.4■□□□□ 0.38
PRKN-205ENST00000366897 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.38
PRKN-205ENST00000366897 SYNMO15061 1565 aa17.39■□□□□ 0.37
PRKN-205ENST00000366897 MAST1Q9Y2H9 1570 aa17.39■□□□□ 0.37
PRKN-205ENST00000366897 DUOX2Q9NRD8 1548 aa17.38■□□□□ 0.37
PRKN-205ENST00000366897 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
PRKN-205ENST00000366897 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
PRKN-205ENST00000366897 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
PRKN-205ENST00000366897 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
PRKN-205ENST00000366897 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
PRKN-205ENST00000366897 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
PRKN-205ENST00000366897 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
PRKN-205ENST00000366897 RRAGDQ9NQL2 400 aaPredicted RBP17.37■□□□□ 0.37
PRKN-205ENST00000366897 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
PRKN-205ENST00000366897 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
PRKN-205ENST00000366897 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
PRKN-205ENST00000366897 MYOM1P52179 1685 aa17.36■□□□□ 0.37
PRKN-205ENST00000366897 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
PRKN-205ENST00000366897 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
PRKN-205ENST00000366897 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
PRKN-205ENST00000366897 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
PRKN-205ENST00000366897 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
PRKN-205ENST00000366897 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
PRKN-205ENST00000366897 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
PRKN-205ENST00000366897 AGLP35573 1532 aa17.34■□□□□ 0.37
PRKN-205ENST00000366897 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
PRKN-205ENST00000366897 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
PRKN-205ENST00000366897 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.36
PRKN-205ENST00000366897 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
PRKN-205ENST00000366897 ERVK-7P63135 1459 aa17.33■□□□□ 0.36
PRKN-205ENST00000366897 KIF3BO15066 747 aa17.32■□□□□ 0.36
PRKN-205ENST00000366897 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
PRKN-205ENST00000366897 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
PRKN-205ENST00000366897 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
PRKN-205ENST00000366897 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
PRKN-205ENST00000366897 UGGT1Q9NYU2 1555 aa17.31■□□□□ 0.36
PRKN-205ENST00000366897 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
PRKN-205ENST00000366897 CLTCL1P53675 1640 aa17.31■□□□□ 0.36
PRKN-205ENST00000366897 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
PRKN-205ENST00000366897 MTHFSP49914 203 aa17.3■□□□□ 0.36
PRKN-205ENST00000366897 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
PRKN-205ENST00000366897 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
PRKN-205ENST00000366897 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
PRKN-205ENST00000366897 GGT6Q6P531 493 aa17.29■□□□□ 0.36
PRKN-205ENST00000366897 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRKN-205ENST00000366897 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
PRKN-205ENST00000366897 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
PRKN-205ENST00000366897 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
PRKN-205ENST00000366897 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
PRKN-205ENST00000366897 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
PRKN-205ENST00000366897 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
PRKN-205ENST00000366897 TRPM2O94759 1503 aa17.26■□□□□ 0.35
PRKN-205ENST00000366897 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
PRKN-205ENST00000366897 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
PRKN-205ENST00000366897 POLR3AO14802 1390 aaPredicted RBP17.26■□□□□ 0.35
PRKN-205ENST00000366897 CEP152O94986 1710 aa17.25■□□□□ 0.35
PRKN-205ENST00000366897 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
PRKN-205ENST00000366897 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRKN-205ENST00000366897 MCM4P33991 863 aa17.25■□□□□ 0.35
PRKN-205ENST00000366897 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
PRKN-205ENST00000366897 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
PRKN-205ENST00000366897 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
PRKN-205ENST00000366897 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
PRKN-205ENST00000366897 PTPRTO14522 1441 aa17.24■□□□□ 0.35
PRKN-205ENST00000366897 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
PRKN-205ENST00000366897 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
PRKN-205ENST00000366897 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
PRKN-205ENST00000366897 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
PRKN-205ENST00000366897 SAFB2Q14151 953 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKN-205ENST00000366897 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
PRKN-205ENST00000366897 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
PRKN-205ENST00000366897 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
PRKN-205ENST00000366897 ZKSCAN2Q63HK3 967 aa17.2■□□□□ 0.34
PRKN-205ENST00000366897 TRAK2O60296 914 aa17.2■□□□□ 0.34
PRKN-205ENST00000366897 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
PRKN-205ENST00000366897 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
PRKN-205ENST00000366897 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
PRKN-205ENST00000366897 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
PRKN-205ENST00000366897 ZMYM3Q14202 1370 aa17.19■□□□□ 0.34
PRKN-205ENST00000366897 KANK1Q14678 1352 aa17.19■□□□□ 0.34
PRKN-205ENST00000366897 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
PRKN-205ENST00000366897 TRIM27P14373 513 aa17.18■□□□□ 0.34
PRKN-205ENST00000366897 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
PRKN-205ENST00000366897 NAP1L5Q96NT1 182 aaPredicted RBP17.18■□□□□ 0.34
PRKN-205ENST00000366897 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
PRKN-205ENST00000366897 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
PRKN-205ENST00000366897 C3P01024 1663 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 NOS1P29475 1434 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
PRKN-205ENST00000366897 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms