RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IFT172Q9UG01 1749 aa31.68■■■□□ 2.66
CD47-202ENST00000361309 ADGRF5Q8IZF2 1346 aa31.68■■■□□ 2.66
CD47-202ENST00000361309 ESCO1Q5FWF5 840 aa31.66■■■□□ 2.66
CD47-202ENST00000361309 USP21Q9UK80 565 aa31.66■■■□□ 2.66
CD47-202ENST00000361309 RGL3Q3MIN7 710 aa31.65■■■□□ 2.66
CD47-202ENST00000361309 CCDC144AA2RUR9 1427 aa31.65■■■□□ 2.66
CD47-202ENST00000361309 MARF1Q9Y4F3 1742 aaKnown RBP31.63■■■□□ 2.65
CD47-202ENST00000361309 STK26Q9P289 416 aa31.63■■■□□ 2.65
CD47-202ENST00000361309 NPHP3Q7Z494 1330 aa31.63■■■□□ 2.65
CD47-202ENST00000361309 PXDNQ92626 1479 aa31.62■■■□□ 2.65
CD47-202ENST00000361309 SPATA31E1Q6ZUB1 1445 aa31.61■■■□□ 2.65
CD47-202ENST00000361309 FNBP4Q8N3X1 1017 aaPredicted RBP31.61■■■□□ 2.65
CD47-202ENST00000361309 TRPC5Q9UL62 973 aaPredicted RBP31.61■■■□□ 2.65
CD47-202ENST00000361309 KNDC1Q76NI1 1749 aa31.61■■■□□ 2.65
CD47-202ENST00000361309 WAPLQ7Z5K2 1190 aa31.6■■■□□ 2.65
CD47-202ENST00000361309 MYOM2P54296 1465 aa31.59■■■□□ 2.65
CD47-202ENST00000361309 TECPR2O15040 1411 aa31.59■■■□□ 2.65
CD47-202ENST00000361309 FOXO3O43524 673 aa31.59■■■□□ 2.65
CD47-202ENST00000361309 ANKRD30BQ9BXX2 1392 aa31.58■■■□□ 2.65
CD47-202ENST00000361309 XPCQ01831 940 aaPredicted RBP31.58■■■□□ 2.65
CD47-202ENST00000361309 LRPPRCP42704 1394 aaKnown RBP31.57■■■□□ 2.64
CD47-202ENST00000361309 NUTM2FA1L443 756 aa31.57■■■□□ 2.64
CD47-202ENST00000361309 MPHOSPH9Q99550 1183 aa31.57■■■□□ 2.64
CD47-202ENST00000361309 ATRNO75882 1429 aa31.57■■■□□ 2.64
CD47-202ENST00000361309 TMEM132EQ6IEE7 984 aa31.56■■■□□ 2.64
CD47-202ENST00000361309 ATAD2Q6PL18 1390 aa31.55■■■□□ 2.64
CD47-202ENST00000361309 FMN2Q9NZ56 1722 aa31.54■■■□□ 2.64
CD47-202ENST00000361309 ABCC11Q96J66 1382 aa31.54■■■□□ 2.64
CD47-202ENST00000361309 PLEKHH1Q9ULM0 1364 aa31.54■■■□□ 2.64
CD47-202ENST00000361309 PIK3C2GO75747 1445 aa31.52■■■□□ 2.64
CD47-202ENST00000361309 BCL9LQ86UU0 1499 aa31.5■■■□□ 2.63
CD47-202ENST00000361309 RGPD8O14715 1765 aaPredicted RBP31.5■■■□□ 2.63
CD47-202ENST00000361309 KIF1AQ12756 1690 aa31.48■■■□□ 2.63
CD47-202ENST00000361309 EP400Q96L91 3159 aa31.48■■■□□ 2.63
CD47-202ENST00000361309 YTHDC2Q9H6S0 1430 aaKnown RBP31.48■■■□□ 2.63
CD47-202ENST00000361309 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.44■■■□□ 2.62
CD47-202ENST00000361309 SPATA31A3Q5VYP0 1347 aa31.42■■■□□ 2.62
CD47-202ENST00000361309 GJD4Q96KN9 370 aaPredicted RBP31.4■■■□□ 2.62
CD47-202ENST00000361309 SIRT1Q96EB6 747 aa31.39■■■□□ 2.62
CD47-202ENST00000361309 C14orf93Q9H972 538 aaKnown RBP31.39■■■□□ 2.62
CD47-202ENST00000361309 KRT28Q7Z3Y7 464 aa31.38■■■□□ 2.61
CD47-202ENST00000361309 SRCAPQ6ZRS2 3230 aa31.37■■■□□ 2.61
CD47-202ENST00000361309 USP32Q8NFA0 1604 aa31.36■■■□□ 2.61
CD47-202ENST00000361309 NRXN1Q9ULB1 1477 aa31.36■■■□□ 2.61
CD47-202ENST00000361309 SLIT2O94813 1529 aa31.35■■■□□ 2.61
CD47-202ENST00000361309 CFAP70Q5T0N1 1121 aa31.35■■■□□ 2.61
CD47-202ENST00000361309 DHX57Q6P158 1386 aaKnown RBP31.34■■■□□ 2.61
CD47-202ENST00000361309 UNC5CLQ8IV45 518 aa31.34■■■□□ 2.61
CD47-202ENST00000361309 GLI3P10071 1580 aa31.34■■■□□ 2.61
CD47-202ENST00000361309 PHF8Q9UPP1 1060 aa31.33■■■□□ 2.61
CD47-202ENST00000361309 BRWD3Q6RI45 1802 aa31.33■■■□□ 2.61
CD47-202ENST00000361309 RALGAPBQ86X10 1494 aa31.32■■■□□ 2.6
CD47-202ENST00000361309 TNS3Q68CZ2 1445 aa31.31■■■□□ 2.6
CD47-202ENST00000361309 ACIN1Q9UKV3 1341 aaKnown RBP31.3■■■□□ 2.6
CD47-202ENST00000361309 SAFB2Q14151 953 aaKnown RBP eCLIP31.3■■■□□ 2.6
CD47-202ENST00000361309 CCDC125Q86Z20 511 aa31.3■■■□□ 2.6
CD47-202ENST00000361309 PSME1Q06323 249 aa31.29■■■□□ 2.6
CD47-202ENST00000361309 PRAM1Q96QH2 718 aa31.29■■■□□ 2.6
CD47-202ENST00000361309 ABCA3Q99758 1704 aa31.28■■■□□ 2.6
CD47-202ENST00000361309 HAP1P54257 671 aaPredicted RBP31.27■■■□□ 2.6
CD47-202ENST00000361309 CABLES1Q8TDN4 633 aa31.27■■■□□ 2.6
CD47-202ENST00000361309 ZRANB1Q9UGI0 708 aa31.27■■■□□ 2.6
CD47-202ENST00000361309 PLCH1Q4KWH8 1693 aa31.27■■■□□ 2.6
CD47-202ENST00000361309 PLEKHG5O94827 1062 aa31.26■■■□□ 2.59
CD47-202ENST00000361309 NWD2Q9ULI1 1742 aa31.25■■■□□ 2.59
CD47-202ENST00000361309 DLC1Q96QB1 1528 aa31.24■■■□□ 2.59
CD47-202ENST00000361309 SBNO1A3KN83 1393 aa31.23■■■□□ 2.59
CD47-202ENST00000361309 LMOD2Q6P5Q4 547 aa31.22■■■□□ 2.59
CD47-202ENST00000361309 POGKQ9P215 609 aa31.22■■■□□ 2.59
CD47-202ENST00000361309 PMFBP1Q8TBY8 1022 aa31.2■■■□□ 2.59
CD47-202ENST00000361309 ARHGEF10O15013 1369 aa31.19■■■□□ 2.58
CD47-202ENST00000361309 ADGRB2O60241 1585 aa31.19■■■□□ 2.58
CD47-202ENST00000361309 ANKARQ7Z5J8 1434 aa31.18■■■□□ 2.58
CD47-202ENST00000361309 VPS72Q15906 364 aa31.18■■■□□ 2.58
CD47-202ENST00000361309 RAB3GAP2Q9H2M9 1393 aa31.17■■■□□ 2.58
CD47-202ENST00000361309 ADGRB1O14514 1584 aa31.17■■■□□ 2.58
CD47-202ENST00000361309 BLMP54132 1417 aaPredicted RBP31.17■■■□□ 2.58
CD47-202ENST00000361309 SEPT12Q8IYM1 358 aa31.17■■■□□ 2.58
CD47-202ENST00000361309 TRPM3Q9HCF6 1732 aaPredicted RBP31.16■■■□□ 2.58
CD47-202ENST00000361309 CCDC9Q9Y3X0 531 aaKnown RBP31.15■■■□□ 2.58
CD47-202ENST00000361309 TRAK1Q9UPV9 953 aa31.14■■■□□ 2.58
CD47-202ENST00000361309 HIRIP3Q9BW71 556 aaPredicted RBP31.13■■■□□ 2.57
CD47-202ENST00000361309 FAM83GA6ND36 823 aa31.12■■■□□ 2.57
CD47-202ENST00000361309 ALS2Q96Q42 1657 aa31.11■■■□□ 2.57
CD47-202ENST00000361309 NRAPQ86VF7 1730 aa31.1■■■□□ 2.57
CD47-202ENST00000361309 MINK1Q8N4C8 1332 aaPredicted RBP31.1■■■□□ 2.57
CD47-202ENST00000361309 ONECUT3O60422 494 aaPredicted RBP31.1■■■□□ 2.57
CD47-202ENST00000361309 DEFB132Q7Z7B7 95 aa31.09■■■□□ 2.57
CD47-202ENST00000361309 KDM2AQ9Y2K7 1162 aa31.09■■■□□ 2.57
CD47-202ENST00000361309 PRR36Q9H6K5 1346 aa31.06■■■□□ 2.56
CD47-202ENST00000361309 SF3B2Q13435 895 aaKnown RBP31.06■■■□□ 2.56
CD47-202ENST00000361309 KRT27Q7Z3Y8 459 aa31.06■■■□□ 2.56
CD47-202ENST00000361309 DCAF11Q8TEB1 546 aa31.06■■■□□ 2.56
CD47-202ENST00000361309 TULP4Q9NRJ4 1543 aa31.06■■■□□ 2.56
CD47-202ENST00000361309 GPRASP1Q5JY77 1395 aa31.05■■■□□ 2.56
CD47-202ENST00000361309 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
CD47-202ENST00000361309 EIF3AQ14152 1382 aaKnown RBP31.05■■■□□ 2.56
CD47-202ENST00000361309 CRYBG1Q9Y4K1 1723 aa31.02■■■□□ 2.56
CD47-202ENST00000361309 WASLO00401 505 aaPredicted RBP31.02■■■□□ 2.56
CD47-202ENST00000361309 BTG4Q9NY30 223 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms