RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 BCL2L13Q9BXK5 485 aa22.6■■□□□ 1.21
APH1A-202ENST00000360244 ISY1Q9ULR0 285 aaKnown RBP22.6■■□□□ 1.21
APH1A-202ENST00000360244 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
APH1A-202ENST00000360244 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
APH1A-202ENST00000360244 TRPM2O94759 1503 aa22.59■■□□□ 1.21
APH1A-202ENST00000360244 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
APH1A-202ENST00000360244 MFAP1P55081 439 aaKnown RBP22.59■■□□□ 1.21
APH1A-202ENST00000360244 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
APH1A-202ENST00000360244 IQSEC2Q5JU85 1478 aa22.59■■□□□ 1.21
APH1A-202ENST00000360244 ESPNB1AK53 854 aa22.58■■□□□ 1.21
APH1A-202ENST00000360244 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
APH1A-202ENST00000360244 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
APH1A-202ENST00000360244 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
APH1A-202ENST00000360244 ZNF692Q9BU19 519 aaPredicted RBP22.58■■□□□ 1.21
APH1A-202ENST00000360244 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
APH1A-202ENST00000360244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.26e-8■■■■□ 20.3
APH1A-202ENST00000360244 MVPQ14764 893 aaKnown RBP22.56■■□□□ 1.2
APH1A-202ENST00000360244 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
APH1A-202ENST00000360244 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
APH1A-202ENST00000360244 HSCBQ8IWL3 235 aa22.56■■□□□ 1.2
APH1A-202ENST00000360244 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
APH1A-202ENST00000360244 SLC24A1O60721 1099 aa22.55■■□□□ 1.2
APH1A-202ENST00000360244 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
APH1A-202ENST00000360244 ZMYND15Q9H091 742 aa22.54■■□□□ 1.2
APH1A-202ENST00000360244 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
APH1A-202ENST00000360244 DDIT3P35638 169 aa22.53■■□□□ 1.2
APH1A-202ENST00000360244 KANK1Q14678 1352 aa22.52■■□□□ 1.2
APH1A-202ENST00000360244 PTPRTO14522 1441 aa22.52■■□□□ 1.2
APH1A-202ENST00000360244 CCDC27Q2M243 656 aa22.5■■□□□ 1.19
APH1A-202ENST00000360244 TRIM44Q96DX7 344 aaPredicted RBP22.49■■□□□ 1.19
APH1A-202ENST00000360244 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
APH1A-202ENST00000360244 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
APH1A-202ENST00000360244 DZIP1LQ8IYY4 767 aaKnown RBP22.48■■□□□ 1.19
APH1A-202ENST00000360244 MORC1Q86VD1 984 aa22.48■■□□□ 1.19
APH1A-202ENST00000360244 HDAC1Q13547 482 aaPredicted RBP22.47■■□□□ 1.19
APH1A-202ENST00000360244 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
APH1A-202ENST00000360244 TNPO1Q92973 898 aaKnown RBP22.47■■□□□ 1.19
APH1A-202ENST00000360244 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
APH1A-202ENST00000360244 GAS2L3Q86XJ1 694 aa22.46■■□□□ 1.19
APH1A-202ENST00000360244 SNX21Q969T3 373 aa22.46■■□□□ 1.19
APH1A-202ENST00000360244 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
APH1A-202ENST00000360244 RBM25P49756 843 aaKnown RBP22.45■■□□□ 1.18
APH1A-202ENST00000360244 NSD3Q9BZ95 1437 aa22.45■■□□□ 1.18
APH1A-202ENST00000360244 SMC5Q8IY18 1101 aa22.45■■□□□ 1.18
APH1A-202ENST00000360244 CIZ1Q9ULV3 898 aaPredicted RBP22.44■■□□□ 1.18
APH1A-202ENST00000360244 ABCA6Q8N139 1617 aa22.44■■□□□ 1.18
APH1A-202ENST00000360244 GBP4Q96PP9 640 aa22.43■■□□□ 1.18
APH1A-202ENST00000360244 MAP3K4Q9Y6R4 1608 aa22.43■■□□□ 1.18
APH1A-202ENST00000360244 TPM2P07951 284 aa22.42■■□□□ 1.18
APH1A-202ENST00000360244 SKOR2Q2VWA4 1001 aaPredicted RBP22.42■■□□□ 1.18
APH1A-202ENST00000360244 ZNF518AQ6AHZ1 1483 aa22.42■■□□□ 1.18
APH1A-202ENST00000360244 RAB3GAP1Q15042 981 aa22.41■■□□□ 1.18
APH1A-202ENST00000360244 MYO3AQ8NEV4 1616 aa22.41■■□□□ 1.18
APH1A-202ENST00000360244 SBNO2Q9Y2G9 1366 aa22.41■■□□□ 1.18
APH1A-202ENST00000360244 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
APH1A-202ENST00000360244 MYOM2P54296 1465 aa22.4■■□□□ 1.18
APH1A-202ENST00000360244 NEURL4Q96JN8 1562 aa22.4■■□□□ 1.18
APH1A-202ENST00000360244 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
APH1A-202ENST00000360244 DDX19BQ9UMR2 479 aa22.4■■□□□ 1.18
APH1A-202ENST00000360244 TRIM27P14373 513 aa22.39■■□□□ 1.18
APH1A-202ENST00000360244 PTMSP20962 102 aa22.39■■□□□ 1.17
APH1A-202ENST00000360244 MTHFSP49914 203 aa22.39■■□□□ 1.17
APH1A-202ENST00000360244 TET3O43151 1660 aa22.39■■□□□ 1.17
APH1A-202ENST00000360244 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
APH1A-202ENST00000360244 SMC4Q9NTJ3 1288 aa22.38■■□□□ 1.17
APH1A-202ENST00000360244 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
APH1A-202ENST00000360244 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
APH1A-202ENST00000360244 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
APH1A-202ENST00000360244 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
APH1A-202ENST00000360244 ABCC1P33527 1531 aa22.37■■□□□ 1.17
APH1A-202ENST00000360244 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
APH1A-202ENST00000360244 PLCH2O75038 1416 aa22.35■■□□□ 1.17
APH1A-202ENST00000360244 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
APH1A-202ENST00000360244 ADGRB2O60241 1585 aa22.35■■□□□ 1.17
APH1A-202ENST00000360244 CCDC173Q0VFZ6 552 aa22.35■■□□□ 1.17
APH1A-202ENST00000360244 ATF7IPQ6VMQ6 1270 aa22.34■■□□□ 1.17
APH1A-202ENST00000360244 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
APH1A-202ENST00000360244 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
APH1A-202ENST00000360244 EFCAB2Q5VUJ9 269 aa22.33■■□□□ 1.17
APH1A-202ENST00000360244 PPP1R9BQ96SB3 815 aa22.33■■□□□ 1.17
APH1A-202ENST00000360244 PDCL3Q9H2J4 239 aa22.33■■□□□ 1.17
APH1A-202ENST00000360244 USP32Q8NFA0 1604 aa22.33■■□□□ 1.16
APH1A-202ENST00000360244 NUCB1Q02818 461 aa22.33■■□□□ 1.16
APH1A-202ENST00000360244 EXOSC9Q06265 439 aaKnown RBP22.33■■□□□ 1.16
APH1A-202ENST00000360244 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.16
APH1A-202ENST00000360244 KIF2CQ99661 725 aa22.32■■□□□ 1.16
APH1A-202ENST00000360244 KIAA1211Q6ZU35 1233 aa22.32■■□□□ 1.16
APH1A-202ENST00000360244 ZBTB40Q9NUA8 1239 aa22.32■■□□□ 1.16
APH1A-202ENST00000360244 U2AF1L5P0DN76 240 aaPredicted RBP22.31■■□□□ 1.16
APH1A-202ENST00000360244 U2AF1Q01081 240 aaKnown RBP eCLIP22.31■■□□□ 1.16
APH1A-202ENST00000360244 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
APH1A-202ENST00000360244 NASPP49321 788 aaPredicted RBP22.3■■□□□ 1.16
APH1A-202ENST00000360244 IFT172Q9UG01 1749 aa22.3■■□□□ 1.16
APH1A-202ENST00000360244 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
APH1A-202ENST00000360244 ZSCAN30Q86W11 494 aa22.3■■□□□ 1.16
APH1A-202ENST00000360244 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
APH1A-202ENST00000360244 NOB1Q9ULX3 412 aaKnown RBP22.3■■□□□ 1.16
APH1A-202ENST00000360244 LNPKQ9C0E8 428 aa22.29■■□□□ 1.16
APH1A-202ENST00000360244 ZFYVE16Q7Z3T8 1539 aa22.29■■□□□ 1.16
APH1A-202ENST00000360244 CD2BP2O95400 341 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms