RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PRAG1Q86YV5 1406 aa24.15■■□□□ 1.46
IFT20-202ENST00000357896 CLTCL1P53675 1640 aa24.14■■□□□ 1.46
IFT20-202ENST00000357896 ESCO1Q5FWF5 840 aa24.14■■□□□ 1.45
IFT20-202ENST00000357896 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
IFT20-202ENST00000357896 MYOM2P54296 1465 aa24.13■■□□□ 1.45
IFT20-202ENST00000357896 BCL9LQ86UU0 1499 aa24.13■■□□□ 1.45
IFT20-202ENST00000357896 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
IFT20-202ENST00000357896 KIF1BO60333 1816 aa24.1■■□□□ 1.45
IFT20-202ENST00000357896 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
IFT20-202ENST00000357896 FOXO3O43524 673 aa24.08■■□□□ 1.45
IFT20-202ENST00000357896 PXDNQ92626 1479 aa24.06■■□□□ 1.44
IFT20-202ENST00000357896 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
IFT20-202ENST00000357896 UNC5CLQ8IV45 518 aa24.05■■□□□ 1.44
IFT20-202ENST00000357896 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
IFT20-202ENST00000357896 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
IFT20-202ENST00000357896 MARF1Q9Y4F3 1742 aaKnown RBP24.02■■□□□ 1.44
IFT20-202ENST00000357896 SF3B2Q13435 895 aaKnown RBP24.01■■□□□ 1.43
IFT20-202ENST00000357896 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
IFT20-202ENST00000357896 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
IFT20-202ENST00000357896 SLIT2O94813 1529 aa23.97■■□□□ 1.43
IFT20-202ENST00000357896 NAIPQ13075 1403 aa23.97■■□□□ 1.43
IFT20-202ENST00000357896 SPATA31A3Q5VYP0 1347 aa23.96■■□□□ 1.43
IFT20-202ENST00000357896 NUTM2FA1L443 756 aa23.96■■□□□ 1.43
IFT20-202ENST00000357896 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
IFT20-202ENST00000357896 SEPT12Q8IYM1 358 aa23.94■■□□□ 1.42
IFT20-202ENST00000357896 GLI3P10071 1580 aa23.94■■□□□ 1.42
IFT20-202ENST00000357896 WAPLQ7Z5K2 1190 aa23.93■■□□□ 1.42
IFT20-202ENST00000357896 SLC4A1APQ9BWU0 796 aaKnown RBP23.93■■□□□ 1.42
IFT20-202ENST00000357896 STK26Q9P289 416 aa23.93■■□□□ 1.42
IFT20-202ENST00000357896 PPLO60437 1756 aa23.93■■□□□ 1.42
IFT20-202ENST00000357896 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
IFT20-202ENST00000357896 TECPR2O15040 1411 aa23.93■■□□□ 1.42
IFT20-202ENST00000357896 HAP1P54257 671 aaPredicted RBP23.92■■□□□ 1.42
IFT20-202ENST00000357896 VPS72Q15906 364 aa23.91■■□□□ 1.42
IFT20-202ENST00000357896 KRT28Q7Z3Y7 464 aa23.91■■□□□ 1.42
IFT20-202ENST00000357896 PPARGC1BQ86YN6 1023 aaKnown RBP23.91■■□□□ 1.42
IFT20-202ENST00000357896 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
IFT20-202ENST00000357896 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
IFT20-202ENST00000357896 PSME1Q06323 249 aa23.89■■□□□ 1.41
IFT20-202ENST00000357896 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
IFT20-202ENST00000357896 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
IFT20-202ENST00000357896 CCDC9Q9Y3X0 531 aaKnown RBP23.87■■□□□ 1.41
IFT20-202ENST00000357896 USP32Q8NFA0 1604 aa23.87■■□□□ 1.41
IFT20-202ENST00000357896 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
IFT20-202ENST00000357896 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
IFT20-202ENST00000357896 ANKRD30BQ9BXX2 1392 aa23.85■■□□□ 1.41
IFT20-202ENST00000357896 LRP5O75197 1615 aa23.84■■□□□ 1.41
IFT20-202ENST00000357896 BRWD3Q6RI45 1802 aa23.84■■□□□ 1.41
IFT20-202ENST00000357896 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
IFT20-202ENST00000357896 BAG6P46379 1132 aa23.83■■□□□ 1.41
IFT20-202ENST00000357896 RGL3Q3MIN7 710 aa23.83■■□□□ 1.41
IFT20-202ENST00000357896 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.41
IFT20-202ENST00000357896 PHF8Q9UPP1 1060 aa23.83■■□□□ 1.41
IFT20-202ENST00000357896 TNS3Q68CZ2 1445 aa23.83■■□□□ 1.4
IFT20-202ENST00000357896 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
IFT20-202ENST00000357896 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
IFT20-202ENST00000357896 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
IFT20-202ENST00000357896 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
IFT20-202ENST00000357896 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
IFT20-202ENST00000357896 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
IFT20-202ENST00000357896 NWD2Q9ULI1 1742 aa23.79■■□□□ 1.4
IFT20-202ENST00000357896 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
IFT20-202ENST00000357896 A0A0G2JS52 829 aa23.78■■□□□ 1.4
IFT20-202ENST00000357896 HRCP23327 699 aa23.78■■□□□ 1.4
IFT20-202ENST00000357896 MYT1Q01538 1121 aa23.78■■□□□ 1.4
IFT20-202ENST00000357896 KNDC1Q76NI1 1749 aa23.78■■□□□ 1.4
IFT20-202ENST00000357896 PSDA5PKW4 1024 aaPredicted RBP23.77■■□□□ 1.4
IFT20-202ENST00000357896 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
IFT20-202ENST00000357896 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
IFT20-202ENST00000357896 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
IFT20-202ENST00000357896 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
IFT20-202ENST00000357896 PLCH1Q4KWH8 1693 aa23.74■■□□□ 1.39
IFT20-202ENST00000357896 FAM98CQ17RN3 349 aaKnown RBP23.73■■□□□ 1.39
IFT20-202ENST00000357896 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
IFT20-202ENST00000357896 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
IFT20-202ENST00000357896 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
IFT20-202ENST00000357896 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
IFT20-202ENST00000357896 EN1Q05925 392 aaPredicted RBP23.69■■□□□ 1.38
IFT20-202ENST00000357896 IFT172Q9UG01 1749 aa23.68■■□□□ 1.38
IFT20-202ENST00000357896 RGPD8O14715 1765 aaPredicted RBP23.66■■□□□ 1.38
IFT20-202ENST00000357896 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
IFT20-202ENST00000357896 PRAM1Q96QH2 718 aa23.66■■□□□ 1.38
IFT20-202ENST00000357896 ABCA3Q99758 1704 aa23.65■■□□□ 1.38
IFT20-202ENST00000357896 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
IFT20-202ENST00000357896 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
IFT20-202ENST00000357896 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
IFT20-202ENST00000357896 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
IFT20-202ENST00000357896 POGKQ9P215 609 aa23.64■■□□□ 1.37
IFT20-202ENST00000357896 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
IFT20-202ENST00000357896 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
IFT20-202ENST00000357896 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
IFT20-202ENST00000357896 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
IFT20-202ENST00000357896 DISP2A7MBM2 1401 aa23.62■■□□□ 1.37
IFT20-202ENST00000357896 CFAP70Q5T0N1 1121 aa23.62■■□□□ 1.37
IFT20-202ENST00000357896 NRAPQ86VF7 1730 aa23.61■■□□□ 1.37
IFT20-202ENST00000357896 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
IFT20-202ENST00000357896 FAM182BQ5T319 152 aa23.6■■□□□ 1.37
IFT20-202ENST00000357896 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
IFT20-202ENST00000357896 EZH2Q15910 746 aaKnown RBP23.57■■□□□ 1.36
IFT20-202ENST00000357896 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms