RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 C9orf84Q5VXU9 1444 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 NCBP3Q53F19 620 aaKnown RBP8.05□□□□□ -1.12
TRIM38-201ENST00000357085 ZKSCAN2Q63HK3 967 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 C22orf23Q9BZE7 217 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 KDM2AQ9Y2K7 1162 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 E9PCH4 1651 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
TRIM38-201ENST00000357085 ERBINQ96RT1 1412 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 OFD1O75665 1012 aa8.05□□□□□ -1.12
TRIM38-201ENST00000357085 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
TRIM38-201ENST00000357085 ASXL1Q8IXJ9 1541 aa8.04□□□□□ -1.12
TRIM38-201ENST00000357085 ARHGEF5Q12774 1597 aa8.04□□□□□ -1.12
TRIM38-201ENST00000357085 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
TRIM38-201ENST00000357085 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
TRIM38-201ENST00000357085 TUBB4AP04350 444 aa8.04□□□□□ -1.12
TRIM38-201ENST00000357085 ABCC11Q96J66 1382 aa8.04□□□□□ -1.12
TRIM38-201ENST00000357085 SPATA31E1Q6ZUB1 1445 aa8.03□□□□□ -1.12
TRIM38-201ENST00000357085 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
TRIM38-201ENST00000357085 NAP1L2Q9ULW6 460 aaPredicted RBP8.03□□□□□ -1.12
TRIM38-201ENST00000357085 EIF4G3O43432 1585 aaKnown RBP8.03□□□□□ -1.12
TRIM38-201ENST00000357085 TPM4P67936 248 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 ADGRL1O94910 1474 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 SHROOM2Q13796 1616 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 MBD5Q9P267 1494 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 ZNF777Q9ULD5 760 aaPredicted RBP8.02□□□□□ -1.13
TRIM38-201ENST00000357085 PANK2Q9BZ23 570 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 UHRF1BP1LA0JNW5 1464 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 PLCB2Q00722 1185 aa8.02□□□□□ -1.13
TRIM38-201ENST00000357085 SETQ01105 290 aaPredicted RBP8.02□□□□□ -1.13
TRIM38-201ENST00000357085 C8orf34Q49A92 452 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 GOLGA6L4A6NEF3 574 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 FOXD1Q16676 465 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 UTP14CQ5TAP6 766 aaKnown RBP8.01□□□□□ -1.13
TRIM38-201ENST00000357085 CCDC34Q96HJ3 373 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 TPM1P09493 284 aa8.01□□□□□ -1.13
TRIM38-201ENST00000357085 APPP05067 770 aa8□□□□□ -1.13
TRIM38-201ENST00000357085 DRC7Q8IY82 874 aa8□□□□□ -1.13
TRIM38-201ENST00000357085 CDC45O75419 566 aa8□□□□□ -1.13
TRIM38-201ENST00000357085 CTR9Q6PD62 1173 aa8□□□□□ -1.13
TRIM38-201ENST00000357085 WDR63Q8IWG1 891 aa8□□□□□ -1.13
TRIM38-201ENST00000357085 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
TRIM38-201ENST00000357085 ADAMTS12P58397 1594 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 KIAA0586Q9BVV6 1533 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 CEP170Q5SW79 1584 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 SNX21Q969T3 373 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 CGNQ9P2M7 1197 aaKnown RBP7.99□□□□□ -1.13
TRIM38-201ENST00000357085 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 SYNJ2O15056 1496 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 CALCOCO1Q9P1Z2 691 aa7.99□□□□□ -1.13
TRIM38-201ENST00000357085 NEMFO60524 1076 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 DMTNQ08495 405 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 GCC1Q96CN9 775 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 KIAA0556O60303 1618 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 DZIP1LQ8IYY4 767 aaKnown RBP7.98□□□□□ -1.13
TRIM38-201ENST00000357085 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 CDK13Q14004 1512 aaKnown RBP7.98□□□□□ -1.13
TRIM38-201ENST00000357085 PRDM15P57071 1507 aaPredicted RBP7.98□□□□□ -1.13
TRIM38-201ENST00000357085 TBC1D32Q96NH3 1257 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 ITPRIPQ8IWB1 547 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 KIAA1210Q9ULL0 1709 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 FOXD4L1Q9NU39 408 aa7.98□□□□□ -1.13
TRIM38-201ENST00000357085 ST20-MTHFSA0A0A6YYL1 179 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 FSD2A1L4K1 749 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 INTS3Q68E01 1043 aaKnown RBP7.97□□□□□ -1.13
TRIM38-201ENST00000357085 XPCQ01831 940 aaPredicted RBP7.97□□□□□ -1.13
TRIM38-201ENST00000357085 FAM107BQ9H098 131 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 IRX3P78415 501 aaPredicted RBP7.97□□□□□ -1.13
TRIM38-201ENST00000357085 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 IFT140Q96RY7 1462 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 NBPF1Q3BBV0 1214 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 FEZ1Q99689 392 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 SPAG9O60271 1321 aaKnown RBP7.97□□□□□ -1.13
TRIM38-201ENST00000357085 IPO4Q8TEX9 1081 aaKnown RBP7.97□□□□□ -1.13
TRIM38-201ENST00000357085 RUNDC1Q96C34 613 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 CDCA7LQ96GN5 454 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 GPATCH3Q96I76 525 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 KIF1BO60333 1816 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 TSPY26PQ9H489 355 aa7.97□□□□□ -1.13
TRIM38-201ENST00000357085 TTC37Q6PGP7 1564 aa7.96□□□□□ -1.13
TRIM38-201ENST00000357085 CBX1P83916 185 aa7.96□□□□□ -1.13
TRIM38-201ENST00000357085 MAGI1Q96QZ7 1491 aaPredicted RBP7.96□□□□□ -1.13
TRIM38-201ENST00000357085 MYO5CQ9NQX4 1742 aa7.96□□□□□ -1.13
TRIM38-201ENST00000357085 PDCP20941 246 aa7.96□□□□□ -1.13
TRIM38-201ENST00000357085 MCTP1Q6DN14 999 aa7.96□□□□□ -1.13
TRIM38-201ENST00000357085 NAT10Q9H0A0 1025 aaKnown RBP7.96□□□□□ -1.13
TRIM38-201ENST00000357085 USP8P40818 1118 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 PTPRGP23470 1445 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 KDM2BQ8NHM5 1336 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 SCAF11Q99590 1463 aaKnown RBP7.96□□□□□ -1.14
TRIM38-201ENST00000357085 TUBB4BP68371 445 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 PRAG1Q86YV5 1406 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 ARID3CA6NKF2 412 aa7.96□□□□□ -1.14
TRIM38-201ENST00000357085 COG6Q9Y2V7 657 aa7.95□□□□□ -1.14
TRIM38-201ENST00000357085 DUOX2Q9NRD8 1548 aa7.95□□□□□ -1.14
TRIM38-201ENST00000357085 TRPM1Q7Z4N2 1603 aa7.95□□□□□ -1.14
TRIM38-201ENST00000357085 GABPB1Q06547 395 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms