RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
NCDN-201ENST00000356090 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
NCDN-201ENST00000356090 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
NCDN-201ENST00000356090 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
NCDN-201ENST00000356090 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
NCDN-201ENST00000356090 PANK2Q9BZ23 570 aa16.87■□□□□ 0.29
NCDN-201ENST00000356090 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
NCDN-201ENST00000356090 ELL2O00472 640 aaPredicted RBP16.86■□□□□ 0.29
NCDN-201ENST00000356090 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
NCDN-201ENST00000356090 ATP10AO60312 1499 aa16.85■□□□□ 0.29
NCDN-201ENST00000356090 UNC13BO14795 1591 aa16.85■□□□□ 0.29
NCDN-201ENST00000356090 PLCH2O75038 1416 aa16.85■□□□□ 0.29
NCDN-201ENST00000356090 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
NCDN-201ENST00000356090 MCM4P33991 863 aa16.84■□□□□ 0.29
NCDN-201ENST00000356090 WDR63Q8IWG1 891 aa16.84■□□□□ 0.29
NCDN-201ENST00000356090 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
NCDN-201ENST00000356090 TRAK2O60296 914 aa16.83■□□□□ 0.29
NCDN-201ENST00000356090 NOB1Q9ULX3 412 aaKnown RBP16.83■□□□□ 0.29
NCDN-201ENST00000356090 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
NCDN-201ENST00000356090 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
NCDN-201ENST00000356090 RRAGDQ9NQL2 400 aaPredicted RBP16.83■□□□□ 0.28
NCDN-201ENST00000356090 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
NCDN-201ENST00000356090 SYNMO15061 1565 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 TRIM27P14373 513 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 NOS1P29475 1434 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
NCDN-201ENST00000356090 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 RIPK4P57078 832 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
NCDN-201ENST00000356090 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
NCDN-201ENST00000356090 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
NCDN-201ENST00000356090 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
NCDN-201ENST00000356090 UBE2Q2Q8WVN8 375 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 MADDQ8WXG6 1647 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
NCDN-201ENST00000356090 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
NCDN-201ENST00000356090 LAMC1P11047 1609 aa16.79■□□□□ 0.28
NCDN-201ENST00000356090 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
NCDN-201ENST00000356090 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
NCDN-201ENST00000356090 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
NCDN-201ENST00000356090 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
NCDN-201ENST00000356090 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
NCDN-201ENST00000356090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
NCDN-201ENST00000356090 FBLN1P23142 703 aa16.77■□□□□ 0.28
NCDN-201ENST00000356090 APBB1O00213 710 aa16.77■□□□□ 0.28
NCDN-201ENST00000356090 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.27
NCDN-201ENST00000356090 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.27
NCDN-201ENST00000356090 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
NCDN-201ENST00000356090 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
NCDN-201ENST00000356090 THUMPD2Q9BTF0 503 aaKnown RBP16.75■□□□□ 0.27
NCDN-201ENST00000356090 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
NCDN-201ENST00000356090 HMOX1P09601 288 aa16.74■□□□□ 0.27
NCDN-201ENST00000356090 AAMPQ13685 434 aa16.74■□□□□ 0.27
NCDN-201ENST00000356090 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
NCDN-201ENST00000356090 PTPRTO14522 1441 aa16.74■□□□□ 0.27
NCDN-201ENST00000356090 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
NCDN-201ENST00000356090 TRPM2O94759 1503 aa16.73■□□□□ 0.27
NCDN-201ENST00000356090 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
NCDN-201ENST00000356090 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
NCDN-201ENST00000356090 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
NCDN-201ENST00000356090 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.27
NCDN-201ENST00000356090 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
NCDN-201ENST00000356090 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.27
NCDN-201ENST00000356090 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
NCDN-201ENST00000356090 FANCAO15360 1455 aa16.7■□□□□ 0.26
NCDN-201ENST00000356090 GBP4Q96PP9 640 aa16.7■□□□□ 0.26
NCDN-201ENST00000356090 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
NCDN-201ENST00000356090 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
NCDN-201ENST00000356090 PRKAR2BP31323 418 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 MRE11P49959 708 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 CHD1LQ86WJ1 897 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
NCDN-201ENST00000356090 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
NCDN-201ENST00000356090 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 TERF2IPQ9NYB0 399 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 ABCC1P33527 1531 aa16.68■□□□□ 0.26
NCDN-201ENST00000356090 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
NCDN-201ENST00000356090 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
NCDN-201ENST00000356090 ANP32BQ92688 251 aaKnown RBP16.67■□□□□ 0.26
NCDN-201ENST00000356090 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
NCDN-201ENST00000356090 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
NCDN-201ENST00000356090 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
NCDN-201ENST00000356090 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
NCDN-201ENST00000356090 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
NCDN-201ENST00000356090 MYOM1P52179 1685 aa16.65■□□□□ 0.26
NCDN-201ENST00000356090 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
NCDN-201ENST00000356090 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
NCDN-201ENST00000356090 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
NCDN-201ENST00000356090 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
NCDN-201ENST00000356090 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
NCDN-201ENST00000356090 SMC5Q8IY18 1101 aa16.64■□□□□ 0.25
NCDN-201ENST00000356090 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
NCDN-201ENST00000356090 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms