RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZMYM3Q14202 1370 aa19.76■□□□□ 0.75
RTN3-205ENST00000356000 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
RTN3-205ENST00000356000 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
RTN3-205ENST00000356000 DDIT3P35638 169 aa19.74■□□□□ 0.75
RTN3-205ENST00000356000 AGLP35573 1532 aa19.74■□□□□ 0.75
RTN3-205ENST00000356000 E9PCH4 1651 aa19.74■□□□□ 0.75
RTN3-205ENST00000356000 IBTKQ9P2D0 1353 aaPredicted RBP19.74■□□□□ 0.75
RTN3-205ENST00000356000 PREX1Q8TCU6 1659 aa19.73■□□□□ 0.75
RTN3-205ENST00000356000 CDK13Q14004 1512 aaKnown RBP19.73■□□□□ 0.75
RTN3-205ENST00000356000 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
RTN3-205ENST00000356000 MCM5P33992 734 aa19.72■□□□□ 0.75
RTN3-205ENST00000356000 CBX1P83916 185 aa19.72■□□□□ 0.75
RTN3-205ENST00000356000 NCOA3Q9Y6Q9 1424 aa19.72■□□□□ 0.75
RTN3-205ENST00000356000 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
RTN3-205ENST00000356000 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
RTN3-205ENST00000356000 ZKSCAN5Q9Y2L8 839 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 PREX2Q70Z35 1606 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 PDLIM2Q96JY6 352 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 GBP4Q96PP9 640 aa19.71■□□□□ 0.75
RTN3-205ENST00000356000 TNPO1Q92973 898 aaKnown RBP19.7■□□□□ 0.74
RTN3-205ENST00000356000 RTEL1-TNFRSF6BF6WH68 1400 aa19.69■□□□□ 0.74
RTN3-205ENST00000356000 PANK3Q9H999 370 aa19.68■□□□□ 0.74
RTN3-205ENST00000356000 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
RTN3-205ENST00000356000 MYRIPQ8NFW9 859 aa19.68■□□□□ 0.74
RTN3-205ENST00000356000 CDK11BP21127 795 aaKnown RBP19.67■□□□□ 0.74
RTN3-205ENST00000356000 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
RTN3-205ENST00000356000 ZNF710Q8N1W2 664 aa19.67■□□□□ 0.74
RTN3-205ENST00000356000 CIZ1Q9ULV3 898 aaPredicted RBP19.67■□□□□ 0.74
RTN3-205ENST00000356000 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
RTN3-205ENST00000356000 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
RTN3-205ENST00000356000 TEX2Q8IWB9 1127 aa19.66■□□□□ 0.74
RTN3-205ENST00000356000 YEATS2Q9ULM3 1422 aa19.66■□□□□ 0.74
RTN3-205ENST00000356000 CHRM1P11229 460 aaPredicted RBP19.65■□□□□ 0.74
RTN3-205ENST00000356000 ZFP91Q96JP5 570 aaPredicted RBP19.65■□□□□ 0.74
RTN3-205ENST00000356000 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
RTN3-205ENST00000356000 ABCC1P33527 1531 aa19.64■□□□□ 0.73
RTN3-205ENST00000356000 RAB3GAP1Q15042 981 aa19.64■□□□□ 0.73
RTN3-205ENST00000356000 DNTTIP2Q5QJE6 756 aaKnown RBP19.64■□□□□ 0.73
RTN3-205ENST00000356000 ZBTB22O15209 634 aa19.64■□□□□ 0.73
RTN3-205ENST00000356000 HSCBQ8IWL3 235 aa19.64■□□□□ 0.73
RTN3-205ENST00000356000 CGNQ9P2M7 1197 aaKnown RBP19.64■□□□□ 0.73
RTN3-205ENST00000356000 DIP2CQ9Y2E4 1556 aa19.63■□□□□ 0.73
RTN3-205ENST00000356000 SLC20A2Q08357 652 aa19.62■□□□□ 0.73
RTN3-205ENST00000356000 C22orf23Q9BZE7 217 aa19.62■□□□□ 0.73
RTN3-205ENST00000356000 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
RTN3-205ENST00000356000 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
RTN3-205ENST00000356000 MROH2AA6NES4 1674 aa19.62■□□□□ 0.73
RTN3-205ENST00000356000 GTF2F1P35269 517 aaKnown RBP eCLIP19.61■□□□□ 0.733e-7■■■■■ 29.2
RTN3-205ENST00000356000 RBM25P49756 843 aaKnown RBP19.61■□□□□ 0.73
RTN3-205ENST00000356000 ZNF445P59923 1031 aa19.61■□□□□ 0.73
RTN3-205ENST00000356000 CGNL1Q0VF96 1302 aa19.61■□□□□ 0.73
RTN3-205ENST00000356000 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
RTN3-205ENST00000356000 SMC5Q8IY18 1101 aa19.6■□□□□ 0.73
RTN3-205ENST00000356000 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
RTN3-205ENST00000356000 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
RTN3-205ENST00000356000 CDC42BPBQ9Y5S2 1711 aa19.6■□□□□ 0.73
RTN3-205ENST00000356000 KLHL40Q2TBA0 621 aa19.6■□□□□ 0.73
RTN3-205ENST00000356000 PLEKHH1Q9ULM0 1364 aa19.6■□□□□ 0.73
RTN3-205ENST00000356000 IQSEC2Q5JU85 1478 aa19.59■□□□□ 0.73
RTN3-205ENST00000356000 IRX5P78411 483 aaPredicted RBP19.59■□□□□ 0.73
RTN3-205ENST00000356000 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.73
RTN3-205ENST00000356000 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.73
RTN3-205ENST00000356000 PRIMPOLQ96LW4 560 aa19.58■□□□□ 0.73
RTN3-205ENST00000356000 GOLGA2Q08379 1002 aa19.58■□□□□ 0.72
RTN3-205ENST00000356000 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
RTN3-205ENST00000356000 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
RTN3-205ENST00000356000 FAM135AQ9P2D6 1515 aa19.57■□□□□ 0.72
RTN3-205ENST00000356000 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
RTN3-205ENST00000356000 PTPRTO14522 1441 aa19.56■□□□□ 0.72
RTN3-205ENST00000356000 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
RTN3-205ENST00000356000 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 SNX21Q969T3 373 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 ABCA6Q8N139 1617 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 HMGN5P82970 282 aaKnown RBP19.55■□□□□ 0.72
RTN3-205ENST00000356000 SLFN5Q08AF3 891 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
RTN3-205ENST00000356000 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
RTN3-205ENST00000356000 NPATQ14207 1427 aa19.54■□□□□ 0.72
RTN3-205ENST00000356000 ARHGAP31Q2M1Z3 1444 aa19.54■□□□□ 0.72
RTN3-205ENST00000356000 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
RTN3-205ENST00000356000 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
RTN3-205ENST00000356000 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
RTN3-205ENST00000356000 IRX3P78415 501 aaPredicted RBP19.54■□□□□ 0.72
RTN3-205ENST00000356000 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
RTN3-205ENST00000356000 RBSNQ9H1K0 784 aa19.53■□□□□ 0.72
RTN3-205ENST00000356000 GOLGA6L22H0YM25 854 aa19.53■□□□□ 0.72
RTN3-205ENST00000356000 DDX49Q9Y6V7 483 aaKnown RBP19.53■□□□□ 0.72
RTN3-205ENST00000356000 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
RTN3-205ENST00000356000 TSC1Q92574 1164 aa19.52■□□□□ 0.72
RTN3-205ENST00000356000 SECISBP2LQ93073 1101 aaKnown RBP19.52■□□□□ 0.72
RTN3-205ENST00000356000 RGS22Q8NE09 1264 aa19.52■□□□□ 0.71
RTN3-205ENST00000356000 BCAR3O75815 825 aa19.51■□□□□ 0.71
RTN3-205ENST00000356000 ZNF771Q7L3S4 317 aaPredicted RBP19.51■□□□□ 0.71
RTN3-205ENST00000356000 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
RTN3-205ENST00000356000 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms