RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RGPD8O14715 1765 aaPredicted RBP23.81■■□□□ 1.4
PDGFA-201ENST00000354513 AFF2P51816 1311 aa23.81■■□□□ 1.4
PDGFA-201ENST00000354513 SOS2Q07890 1332 aaPredicted RBP23.81■■□□□ 1.4
PDGFA-201ENST00000354513 PXDNQ92626 1479 aa23.79■■□□□ 1.4
PDGFA-201ENST00000354513 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
PDGFA-201ENST00000354513 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
PDGFA-201ENST00000354513 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
PDGFA-201ENST00000354513 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
PDGFA-201ENST00000354513 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
PDGFA-201ENST00000354513 RGS12O14924 1447 aa23.75■■□□□ 1.39
PDGFA-201ENST00000354513 KIF1AQ12756 1690 aa23.74■■□□□ 1.39
PDGFA-201ENST00000354513 MYOM2P54296 1465 aa23.73■■□□□ 1.39
PDGFA-201ENST00000354513 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
PDGFA-201ENST00000354513 RXRBP28702 533 aa23.72■■□□□ 1.39
PDGFA-201ENST00000354513 C8orf37Q96NL8 207 aa23.72■■□□□ 1.39
PDGFA-201ENST00000354513 YTHDC2Q9H6S0 1430 aaKnown RBP23.72■■□□□ 1.39
PDGFA-201ENST00000354513 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
PDGFA-201ENST00000354513 UPF1Q92900 1129 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDGFA-201ENST00000354513 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.38
PDGFA-201ENST00000354513 STK26Q9P289 416 aa23.69■■□□□ 1.38
PDGFA-201ENST00000354513 ABCA3Q99758 1704 aa23.68■■□□□ 1.38
PDGFA-201ENST00000354513 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.68■■□□□ 1.38
PDGFA-201ENST00000354513 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
PDGFA-201ENST00000354513 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
PDGFA-201ENST00000354513 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
PDGFA-201ENST00000354513 ESCO1Q5FWF5 840 aa23.64■■□□□ 1.38
PDGFA-201ENST00000354513 ADGRB1O14514 1584 aa23.64■■□□□ 1.38
PDGFA-201ENST00000354513 NPHP3Q7Z494 1330 aa23.64■■□□□ 1.37
PDGFA-201ENST00000354513 QTRT2Q9H974 415 aaKnown RBP23.63■■□□□ 1.37
PDGFA-201ENST00000354513 ADGRB2O60241 1585 aa23.63■■□□□ 1.37
PDGFA-201ENST00000354513 DLC1Q96QB1 1528 aa23.62■■□□□ 1.37
PDGFA-201ENST00000354513 ATRNO75882 1429 aa23.62■■□□□ 1.37
PDGFA-201ENST00000354513 NUTM2FA1L443 756 aa23.61■■□□□ 1.37
PDGFA-201ENST00000354513 RBM6P78332 1123 aaKnown RBP23.61■■□□□ 1.37
PDGFA-201ENST00000354513 XPCQ01831 940 aaPredicted RBP23.61■■□□□ 1.37
PDGFA-201ENST00000354513 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
PDGFA-201ENST00000354513 NGLY1Q96IV0 654 aa23.6■■□□□ 1.37
PDGFA-201ENST00000354513 FOXO3O43524 673 aa23.59■■□□□ 1.37
PDGFA-201ENST00000354513 BCL9LQ86UU0 1499 aa23.59■■□□□ 1.37
PDGFA-201ENST00000354513 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
PDGFA-201ENST00000354513 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
PDGFA-201ENST00000354513 PLCH1Q4KWH8 1693 aa23.58■■□□□ 1.37
PDGFA-201ENST00000354513 TRPM3Q9HCF6 1732 aaPredicted RBP23.58■■□□□ 1.36
PDGFA-201ENST00000354513 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
PDGFA-201ENST00000354513 USP21Q9UK80 565 aa23.57■■□□□ 1.36
PDGFA-201ENST00000354513 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
PDGFA-201ENST00000354513 GLI3P10071 1580 aa23.56■■□□□ 1.36
PDGFA-201ENST00000354513 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
PDGFA-201ENST00000354513 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
PDGFA-201ENST00000354513 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
PDGFA-201ENST00000354513 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
PDGFA-201ENST00000354513 EP400Q96L91 3159 aa23.53■■□□□ 1.36
PDGFA-201ENST00000354513 CRYBG1Q9Y4K1 1723 aa23.52■■□□□ 1.36
PDGFA-201ENST00000354513 ALS2Q96Q42 1657 aa23.52■■□□□ 1.36
PDGFA-201ENST00000354513 SLIT2O94813 1529 aa23.52■■□□□ 1.36
PDGFA-201ENST00000354513 NWD2Q9ULI1 1742 aa23.51■■□□□ 1.35
PDGFA-201ENST00000354513 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
PDGFA-201ENST00000354513 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
PDGFA-201ENST00000354513 PRAM1Q96QH2 718 aa23.49■■□□□ 1.35
PDGFA-201ENST00000354513 NRAPQ86VF7 1730 aa23.49■■□□□ 1.35
PDGFA-201ENST00000354513 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
PDGFA-201ENST00000354513 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
PDGFA-201ENST00000354513 KRT28Q7Z3Y7 464 aa23.46■■□□□ 1.35
PDGFA-201ENST00000354513 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
PDGFA-201ENST00000354513 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
PDGFA-201ENST00000354513 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
PDGFA-201ENST00000354513 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
PDGFA-201ENST00000354513 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
PDGFA-201ENST00000354513 SBNO1A3KN83 1393 aa23.43■■□□□ 1.34
PDGFA-201ENST00000354513 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
PDGFA-201ENST00000354513 TOPAZ1Q8N9V7 1692 aa23.41■■□□□ 1.34
PDGFA-201ENST00000354513 PRR36Q9H6K5 1346 aa23.41■■□□□ 1.34
PDGFA-201ENST00000354513 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
PDGFA-201ENST00000354513 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
PDGFA-201ENST00000354513 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
PDGFA-201ENST00000354513 UNC5CLQ8IV45 518 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
PDGFA-201ENST00000354513 POGKQ9P215 609 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 KDM2AQ9Y2K7 1162 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
PDGFA-201ENST00000354513 ATP7BP35670 1465 aa23.36■■□□□ 1.33
PDGFA-201ENST00000354513 COL14A1Q05707 1796 aaKnown RBP23.36■■□□□ 1.33
PDGFA-201ENST00000354513 HRCP23327 699 aa23.35■■□□□ 1.33
PDGFA-201ENST00000354513 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
PDGFA-201ENST00000354513 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
PDGFA-201ENST00000354513 PSME1Q06323 249 aa23.33■■□□□ 1.33
PDGFA-201ENST00000354513 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
PDGFA-201ENST00000354513 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
PDGFA-201ENST00000354513 WASLO00401 505 aaPredicted RBP23.29■■□□□ 1.32
PDGFA-201ENST00000354513 VPS72Q15906 364 aa23.27■■□□□ 1.32
PDGFA-201ENST00000354513 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
PDGFA-201ENST00000354513 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
PDGFA-201ENST00000354513 THSD7AQ9UPZ6 1657 aa23.26■■□□□ 1.31
PDGFA-201ENST00000354513 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
PDGFA-201ENST00000354513 QRICH2Q9H0J4 1663 aa23.24■■□□□ 1.31
PDGFA-201ENST00000354513 HAP1P54257 671 aaPredicted RBP23.24■■□□□ 1.31
PDGFA-201ENST00000354513 GPRASP1Q5JY77 1395 aa23.23■■□□□ 1.31
PDGFA-201ENST00000354513 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms