RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TBX22Q9Y458 520 aa28.05■■■□□ 2.08
TRIM4-202ENST00000354241 TMC1Q8TDI8 760 aa28.04■■■□□ 2.08
TRIM4-202ENST00000354241 KTN1Q86UP2 1357 aaKnown RBP28.04■■■□□ 2.08
TRIM4-202ENST00000354241 FAM135BQ49AJ0 1406 aa28.03■■■□□ 2.08
TRIM4-202ENST00000354241 SRPK2P78362 688 aaKnown RBP28.03■■■□□ 2.08
TRIM4-202ENST00000354241 KNSTRNQ9Y448 316 aa28.03■■■□□ 2.08
TRIM4-202ENST00000354241 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
TRIM4-202ENST00000354241 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
TRIM4-202ENST00000354241 RALBP1Q15311 655 aa28.01■■■□□ 2.07
TRIM4-202ENST00000354241 CCDC184Q52MB2 194 aa28■■■□□ 2.07
TRIM4-202ENST00000354241 CC2D1BQ5T0F9 858 aaKnown RBP28■■■□□ 2.07
TRIM4-202ENST00000354241 SLC12A5Q9H2X9 1139 aa27.99■■■□□ 2.07
TRIM4-202ENST00000354241 ROBO2Q9HCK4 1378 aa27.99■■■□□ 2.07
TRIM4-202ENST00000354241 CDK19Q9BWU1 502 aa27.98■■■□□ 2.07
TRIM4-202ENST00000354241 MRS2Q9HD23 443 aa27.98■■■□□ 2.07
TRIM4-202ENST00000354241 CENPBP07199 599 aaPredicted RBP27.97■■■□□ 2.07
TRIM4-202ENST00000354241 PARD3Q8TEW0 1356 aa27.97■■■□□ 2.07
TRIM4-202ENST00000354241 AMOTL2Q9Y2J4 779 aa27.96■■■□□ 2.07
TRIM4-202ENST00000354241 ATAD2Q6PL18 1390 aa27.95■■■□□ 2.07
TRIM4-202ENST00000354241 MYBBP1AQ9BQG0 1328 aaKnown RBP27.95■■■□□ 2.06
TRIM4-202ENST00000354241 CARD14Q9BXL6 1004 aa27.93■■■□□ 2.06
TRIM4-202ENST00000354241 AMER1Q5JTC6 1135 aaPredicted RBP27.92■■■□□ 2.06
TRIM4-202ENST00000354241 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
TRIM4-202ENST00000354241 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
TRIM4-202ENST00000354241 NINLQ9Y2I6 1382 aa27.91■■■□□ 2.06
TRIM4-202ENST00000354241 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.9■■■□□ 2.06
TRIM4-202ENST00000354241 PIK3R4Q99570 1358 aa27.9■■■□□ 2.06
TRIM4-202ENST00000354241 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
TRIM4-202ENST00000354241 PTCH1Q13635 1447 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 NSD3Q9BZ95 1437 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 WASLO00401 505 aaPredicted RBP27.89■■■□□ 2.06
TRIM4-202ENST00000354241 ANKRD36BQ8N2N9 1353 aa27.89■■■□□ 2.06
TRIM4-202ENST00000354241 NPC1L1Q9UHC9 1359 aa27.88■■■□□ 2.05
TRIM4-202ENST00000354241 NCKAP5LQ9HCH0 1330 aa27.87■■■□□ 2.05
TRIM4-202ENST00000354241 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
TRIM4-202ENST00000354241 ADGRB2O60241 1585 aa27.86■■■□□ 2.05
TRIM4-202ENST00000354241 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
TRIM4-202ENST00000354241 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 FAM9BQ8IZU0 186 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 USP32Q8NFA0 1604 aa27.83■■■□□ 2.05
TRIM4-202ENST00000354241 KCNA6P17658 529 aa27.82■■■□□ 2.04
TRIM4-202ENST00000354241 A0A1W2PP64 1363 aa27.82■■■□□ 2.04
TRIM4-202ENST00000354241 TERF2IPQ9NYB0 399 aa27.81■■■□□ 2.04
TRIM4-202ENST00000354241 CABP1Q9NZU7 370 aa27.81■■■□□ 2.04
TRIM4-202ENST00000354241 CD163L1Q9NR16 1453 aa27.79■■■□□ 2.04
TRIM4-202ENST00000354241 HDGFL2Q7Z4V5 671 aaPredicted RBP27.78■■■□□ 2.04
TRIM4-202ENST00000354241 NUDT16Q96DE0 195 aaKnown RBP27.78■■■□□ 2.04
TRIM4-202ENST00000354241 CGNL1Q0VF96 1302 aa27.77■■■□□ 2.04
TRIM4-202ENST00000354241 PPIP5K1Q6PFW1 1433 aa27.76■■■□□ 2.04
TRIM4-202ENST00000354241 ATP7BP35670 1465 aa27.76■■■□□ 2.03
TRIM4-202ENST00000354241 PPP2R1AP30153 589 aa27.75■■■□□ 2.03
TRIM4-202ENST00000354241 HSPA2P54652 639 aa27.73■■■□□ 2.03
TRIM4-202ENST00000354241 CCDC61Q9Y6R9 512 aa27.73■■■□□ 2.03
TRIM4-202ENST00000354241 PNISRQ8TF01 805 aaKnown RBP27.72■■■□□ 2.03
TRIM4-202ENST00000354241 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
TRIM4-202ENST00000354241 HNRNPUQ00839 825 aaKnown RBP eCLIP27.71■■■□□ 2.03
TRIM4-202ENST00000354241 NUTM2FA1L443 756 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 ITSN1Q15811 1721 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 MORC1Q86VD1 984 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 TOPAZ1Q8N9V7 1692 aa27.7■■■□□ 2.02
TRIM4-202ENST00000354241 CDC42BPGQ6DT37 1551 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 NSD2O96028 1365 aa27.69■■■□□ 2.02
TRIM4-202ENST00000354241 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 NWD1Q149M9 1564 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 KIF20BQ96Q89 1820 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 AKAP12Q02952 1782 aa27.67■■■□□ 2.02
TRIM4-202ENST00000354241 CPSF1Q10570 1443 aaKnown RBP27.66■■■□□ 2.02
TRIM4-202ENST00000354241 ANKRD26Q9UPS8 1709 aa27.65■■■□□ 2.02
TRIM4-202ENST00000354241 MON2Q7Z3U7 1717 aa27.65■■■□□ 2.02
TRIM4-202ENST00000354241 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
TRIM4-202ENST00000354241 RBM33Q96EV2 1170 aaKnown RBP27.63■■■□□ 2.01
TRIM4-202ENST00000354241 FMN2Q9NZ56 1722 aa27.63■■■□□ 2.01
TRIM4-202ENST00000354241 TNNT2P45379 298 aaPredicted RBP27.63■■■□□ 2.01
TRIM4-202ENST00000354241 GGNBP2Q9H3C7 697 aa27.61■■■□□ 2.01
TRIM4-202ENST00000354241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.61■■■□□ 2.01
TRIM4-202ENST00000354241 FYB1O15117 783 aa27.6■■■□□ 2.01
TRIM4-202ENST00000354241 EDC4Q6P2E9 1401 aaKnown RBP27.6■■■□□ 2.01
TRIM4-202ENST00000354241 NKTRP30414 1462 aaKnown RBP27.59■■■□□ 2.01
TRIM4-202ENST00000354241 STRCQ7RTU9 1775 aa27.58■■■□□ 2.01
TRIM4-202ENST00000354241 ZNF692Q9BU19 519 aaPredicted RBP27.58■■■□□ 2.01
TRIM4-202ENST00000354241 ANKARQ7Z5J8 1434 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 ADGRL3Q9HAR2 1447 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 PLEKHG3A1L390 1219 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 ACEP12821 1306 aa27.57■■■□□ 2
TRIM4-202ENST00000354241 C14orf37Q86TY3 774 aa27.56■■■□□ 2
TRIM4-202ENST00000354241 PROSER2Q86WR7 435 aaPredicted RBP27.55■■■□□ 2
TRIM4-202ENST00000354241 PMFBP1Q8TBY8 1022 aa27.53■■■□□ 2
TRIM4-202ENST00000354241 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
TRIM4-202ENST00000354241 NRKQ7Z2Y5 1582 aa27.52■■■□□ 2
TRIM4-202ENST00000354241 WDR43Q15061 677 aaKnown RBP eCLIP27.51■■■□□ 2
TRIM4-202ENST00000354241 NME9Q86XW9 330 aa27.49■■□□□ 1.99
TRIM4-202ENST00000354241 USP6P35125 1406 aa27.49■■□□□ 1.99
TRIM4-202ENST00000354241 POLR3AO14802 1390 aaPredicted RBP27.49■■□□□ 1.99
TRIM4-202ENST00000354241 NGDNQ8NEJ9 315 aaKnown RBP27.49■■□□□ 1.99
TRIM4-202ENST00000354241 ZBED9Q6R2W3 1325 aa27.48■■□□□ 1.99
TRIM4-202ENST00000354241 MTHFSP49914 203 aa27.48■■□□□ 1.99
TRIM4-202ENST00000354241 TTC21BQ7Z4L5 1316 aa27.46■■□□□ 1.99
TRIM4-202ENST00000354241 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.99
TRIM4-202ENST00000354241 SENP3-EIF4A1A0A087X0R7 540 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms