RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
CAST-205ENST00000348386 USP47Q96K76 1375 aa10.82□□□□□ -0.68
CAST-205ENST00000348386 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
CAST-205ENST00000348386 SAFB2Q14151 953 aaKnown RBP eCLIP10.82□□□□□ -0.68
CAST-205ENST00000348386 NPHP4O75161 1426 aaPredicted RBP10.82□□□□□ -0.68
CAST-205ENST00000348386 ADAMTS13Q76LX8 1427 aa10.81□□□□□ -0.68
CAST-205ENST00000348386 ARID3AQ99856 593 aa10.81□□□□□ -0.68
CAST-205ENST00000348386 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
CAST-205ENST00000348386 TBX22Q9Y458 520 aa10.81□□□□□ -0.68
CAST-205ENST00000348386 TRPM1Q7Z4N2 1603 aa10.81□□□□□ -0.68
CAST-205ENST00000348386 ALKQ9UM73 1620 aa10.81□□□□□ -0.68
CAST-205ENST00000348386 GPRASP1Q5JY77 1395 aa10.8□□□□□ -0.68
CAST-205ENST00000348386 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
CAST-205ENST00000348386 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
CAST-205ENST00000348386 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
CAST-205ENST00000348386 AMOTL2Q9Y2J4 779 aa10.79□□□□□ -0.68
CAST-205ENST00000348386 WAPLQ7Z5K2 1190 aa10.79□□□□□ -0.68
CAST-205ENST00000348386 POGKQ9P215 609 aa10.79□□□□□ -0.68
CAST-205ENST00000348386 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
CAST-205ENST00000348386 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
CAST-205ENST00000348386 YTHDC2Q9H6S0 1430 aaKnown RBP10.78□□□□□ -0.68
CAST-205ENST00000348386 SETBP1Q9Y6X0 1596 aa10.78□□□□□ -0.68
CAST-205ENST00000348386 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
CAST-205ENST00000348386 IQGAP1P46940 1657 aa10.78□□□□□ -0.68
CAST-205ENST00000348386 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
CAST-205ENST00000348386 NRXN3Q9Y4C0 1643 aa10.77□□□□□ -0.69
CAST-205ENST00000348386 ASXL1Q8IXJ9 1541 aa10.77□□□□□ -0.69
CAST-205ENST00000348386 KCNA6P17658 529 aa10.77□□□□□ -0.69
CAST-205ENST00000348386 CENPJQ9HC77 1338 aaPredicted RBP10.76□□□□□ -0.69
CAST-205ENST00000348386 LRPPRCP42704 1394 aaKnown RBP10.76□□□□□ -0.69
CAST-205ENST00000348386 MED14O60244 1454 aa10.76□□□□□ -0.69
CAST-205ENST00000348386 EIF3AQ14152 1382 aaKnown RBP10.76□□□□□ -0.69
CAST-205ENST00000348386 PTPRUQ92729 1446 aa10.76□□□□□ -0.69
CAST-205ENST00000348386 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
CAST-205ENST00000348386 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
CAST-205ENST00000348386 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
CAST-205ENST00000348386 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
CAST-205ENST00000348386 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
CAST-205ENST00000348386 ROBO2Q9HCK4 1378 aa10.74□□□□□ -0.69
CAST-205ENST00000348386 KIAA1210Q9ULL0 1709 aa10.74□□□□□ -0.69
CAST-205ENST00000348386 LAMC1P11047 1609 aa10.74□□□□□ -0.69
CAST-205ENST00000348386 TESK2Q96S53 571 aa10.74□□□□□ -0.69
CAST-205ENST00000348386 TMF1P82094 1093 aa10.72□□□□□ -0.69
CAST-205ENST00000348386 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
CAST-205ENST00000348386 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
CAST-205ENST00000348386 PROSER2Q86WR7 435 aaPredicted RBP10.72□□□□□ -0.69
CAST-205ENST00000348386 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
CAST-205ENST00000348386 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
CAST-205ENST00000348386 PIK3R4Q99570 1358 aa10.71□□□□□ -0.69
CAST-205ENST00000348386 DIP2AQ14689 1571 aa10.71□□□□□ -0.7
CAST-205ENST00000348386 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
CAST-205ENST00000348386 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
CAST-205ENST00000348386 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
CAST-205ENST00000348386 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
CAST-205ENST00000348386 WASHC2AQ641Q2 1341 aa10.7□□□□□ -0.7
CAST-205ENST00000348386 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
CAST-205ENST00000348386 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
CAST-205ENST00000348386 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
CAST-205ENST00000348386 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
CAST-205ENST00000348386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAST-205ENST00000348386 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
CAST-205ENST00000348386 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
CAST-205ENST00000348386 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
CAST-205ENST00000348386 CDK19Q9BWU1 502 aa10.68□□□□□ -0.7
CAST-205ENST00000348386 TECPR2O15040 1411 aa10.68□□□□□ -0.7
CAST-205ENST00000348386 EVC2Q86UK5 1308 aa10.68□□□□□ -0.7
CAST-205ENST00000348386 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
CAST-205ENST00000348386 FAM135BQ49AJ0 1406 aa10.68□□□□□ -0.7
CAST-205ENST00000348386 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
CAST-205ENST00000348386 TMC1Q8TDI8 760 aa10.67□□□□□ -0.7
CAST-205ENST00000348386 DLC1Q96QB1 1528 aa10.66□□□□□ -0.7
CAST-205ENST00000348386 PTCH1Q13635 1447 aa10.66□□□□□ -0.7
CAST-205ENST00000348386 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
CAST-205ENST00000348386 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
CAST-205ENST00000348386 ARHGEF28Q8N1W1 1705 aaKnown RBP10.65□□□□□ -0.7
CAST-205ENST00000348386 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
CAST-205ENST00000348386 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
CAST-205ENST00000348386 TMEM94Q12767 1356 aa10.65□□□□□ -0.7
CAST-205ENST00000348386 CPS1P31327 1500 aa10.65□□□□□ -0.7
CAST-205ENST00000348386 CNGB1Q14028 1251 aaPredicted RBP10.65□□□□□ -0.7
CAST-205ENST00000348386 SAMD1Q6SPF0 538 aaPredicted RBP10.65□□□□□ -0.7
CAST-205ENST00000348386 NECTIN2Q92692 538 aa10.65□□□□□ -0.7
CAST-205ENST00000348386 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
CAST-205ENST00000348386 QRICH2Q9H0J4 1663 aa10.64□□□□□ -0.71
CAST-205ENST00000348386 XRN1Q8IZH2 1706 aaKnown RBP10.63□□□□□ -0.71
CAST-205ENST00000348386 SLC12A5Q9H2X9 1139 aa10.63□□□□□ -0.71
CAST-205ENST00000348386 CHD2O14647 1828 aaKnown RBP10.63□□□□□ -0.71
CAST-205ENST00000348386 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
CAST-205ENST00000348386 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
CAST-205ENST00000348386 NUDT16Q96DE0 195 aaKnown RBP10.62□□□□□ -0.71
CAST-205ENST00000348386 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
CAST-205ENST00000348386 C19orf44Q9H6X5 657 aa10.61□□□□□ -0.71
CAST-205ENST00000348386 CABP1Q9NZU7 370 aa10.61□□□□□ -0.71
CAST-205ENST00000348386 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
CAST-205ENST00000348386 KNDC1Q76NI1 1749 aa10.61□□□□□ -0.71
CAST-205ENST00000348386 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
CAST-205ENST00000348386 ATF3P18847 181 aa10.61□□□□□ -0.71
CAST-205ENST00000348386 PANK3Q9H999 370 aa10.61□□□□□ -0.71
CAST-205ENST00000348386 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
CAST-205ENST00000348386 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms