RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
NUP50-201ENST00000347635 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
NUP50-201ENST00000347635 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
NUP50-201ENST00000347635 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
NUP50-201ENST00000347635 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
NUP50-201ENST00000347635 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
NUP50-201ENST00000347635 ABCC2Q92887 1545 aa18.22■□□□□ 0.51
NUP50-201ENST00000347635 GOLGA6L4A6NEF3 574 aa18.22■□□□□ 0.51
NUP50-201ENST00000347635 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
NUP50-201ENST00000347635 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
NUP50-201ENST00000347635 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
NUP50-201ENST00000347635 FAM43AQ8N2R8 423 aa18.21■□□□□ 0.51
NUP50-201ENST00000347635 KIAA2012Q0VF49 1180 aa18.21■□□□□ 0.51
NUP50-201ENST00000347635 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 DISP3Q9P2K9 1392 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
NUP50-201ENST00000347635 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 MRE11P49959 708 aa18.2■□□□□ 0.5
NUP50-201ENST00000347635 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
NUP50-201ENST00000347635 LTV1Q96GA3 475 aaPredicted RBP18.19■□□□□ 0.5
NUP50-201ENST00000347635 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
NUP50-201ENST00000347635 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
NUP50-201ENST00000347635 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 TRAK2O60296 914 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
NUP50-201ENST00000347635 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
NUP50-201ENST00000347635 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
NUP50-201ENST00000347635 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
NUP50-201ENST00000347635 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
NUP50-201ENST00000347635 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
NUP50-201ENST00000347635 EVA1CP58658 441 aa18.17■□□□□ 0.5
NUP50-201ENST00000347635 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
NUP50-201ENST00000347635 NOL8Q76FK4 1167 aaKnown RBP18.16■□□□□ 0.5
NUP50-201ENST00000347635 FGD1P98174 961 aa18.16■□□□□ 0.5
NUP50-201ENST00000347635 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
NUP50-201ENST00000347635 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
NUP50-201ENST00000347635 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
NUP50-201ENST00000347635 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
NUP50-201ENST00000347635 LRPPRCP42704 1394 aaKnown RBP18.15■□□□□ 0.5
NUP50-201ENST00000347635 ATAD2Q6PL18 1390 aa18.15■□□□□ 0.5
NUP50-201ENST00000347635 PHF14O94880 888 aa18.15■□□□□ 0.5
NUP50-201ENST00000347635 SLC12A5Q9H2X9 1139 aa18.15■□□□□ 0.5
NUP50-201ENST00000347635 DNMT1P26358 1616 aaKnown RBP18.15■□□□□ 0.5
NUP50-201ENST00000347635 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
NUP50-201ENST00000347635 GCC2Q8IWJ2 1684 aa18.14■□□□□ 0.49
NUP50-201ENST00000347635 GNAI1P63096 354 aa18.14■□□□□ 0.49
NUP50-201ENST00000347635 DRC7Q8IY82 874 aa18.14■□□□□ 0.49
NUP50-201ENST00000347635 REC8O95072 547 aa18.13■□□□□ 0.49
NUP50-201ENST00000347635 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
NUP50-201ENST00000347635 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
NUP50-201ENST00000347635 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
NUP50-201ENST00000347635 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
NUP50-201ENST00000347635 CDC45O75419 566 aa18.12■□□□□ 0.49
NUP50-201ENST00000347635 NOB1Q9ULX3 412 aaKnown RBP18.12■□□□□ 0.49
NUP50-201ENST00000347635 PZPP20742 1482 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
NUP50-201ENST00000347635 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 SHANK2Q9UPX8 1470 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 NUCB2P80303 420 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 A2MP01023 1474 aa18.11■□□□□ 0.49
NUP50-201ENST00000347635 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
NUP50-201ENST00000347635 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
NUP50-201ENST00000347635 TEFQ10587 303 aa18.1■□□□□ 0.49
NUP50-201ENST00000347635 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
NUP50-201ENST00000347635 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
NUP50-201ENST00000347635 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
NUP50-201ENST00000347635 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
NUP50-201ENST00000347635 NLRP6P59044 892 aa18.09■□□□□ 0.49
NUP50-201ENST00000347635 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
NUP50-201ENST00000347635 HMOX1P09601 288 aa18.08■□□□□ 0.49
NUP50-201ENST00000347635 ARID3AQ99856 593 aa18.08■□□□□ 0.49
NUP50-201ENST00000347635 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.49
NUP50-201ENST00000347635 RILPL2Q969X0 211 aa18.08■□□□□ 0.49
NUP50-201ENST00000347635 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.48
NUP50-201ENST00000347635 MCTP1Q6DN14 999 aa18.08■□□□□ 0.48
NUP50-201ENST00000347635 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
NUP50-201ENST00000347635 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
NUP50-201ENST00000347635 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
NUP50-201ENST00000347635 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
NUP50-201ENST00000347635 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
NUP50-201ENST00000347635 MCM4P33991 863 aa18.06■□□□□ 0.48
NUP50-201ENST00000347635 GPATCH3Q96I76 525 aa18.06■□□□□ 0.48
NUP50-201ENST00000347635 NRDCO43847 1150 aa18.05■□□□□ 0.48
NUP50-201ENST00000347635 NASPP49321 788 aaPredicted RBP18.05■□□□□ 0.48
NUP50-201ENST00000347635 IDI1Q13907 227 aa18.04■□□□□ 0.48
NUP50-201ENST00000347635 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
NUP50-201ENST00000347635 ABTB2Q8N961 1025 aa18.03■□□□□ 0.48
NUP50-201ENST00000347635 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
NUP50-201ENST00000347635 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
NUP50-201ENST00000347635 ISY1Q9ULR0 285 aaKnown RBP18.03■□□□□ 0.48
NUP50-201ENST00000347635 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
NUP50-201ENST00000347635 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms