RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 MROH2AA6NES4 1674 aa27.41■■□□□ 1.98
TRIM3-201ENST00000345851 XRCC6P12956 609 aaKnown RBP eCLIP27.41■■□□□ 1.98
TRIM3-201ENST00000345851 PANK2Q9BZ23 570 aa27.41■■□□□ 1.98
TRIM3-201ENST00000345851 EIF3AQ14152 1382 aaKnown RBP27.4■■□□□ 1.98
TRIM3-201ENST00000345851 ABCC3O15438 1527 aa27.4■■□□□ 1.98
TRIM3-201ENST00000345851 KNSTRNQ9Y448 316 aa27.39■■□□□ 1.98
TRIM3-201ENST00000345851 NOS1P29475 1434 aa27.39■■□□□ 1.98
TRIM3-201ENST00000345851 KIF1BO60333 1816 aa27.39■■□□□ 1.97
TRIM3-201ENST00000345851 PNNQ9H307 717 aaKnown RBP27.38■■□□□ 1.97
TRIM3-201ENST00000345851 ANTXR1Q9H6X2 564 aa27.38■■□□□ 1.97
TRIM3-201ENST00000345851 GLIPR1L2Q4G1C9 344 aa27.38■■□□□ 1.97
TRIM3-201ENST00000345851 LMTK2Q8IWU2 1503 aa27.37■■□□□ 1.97
TRIM3-201ENST00000345851 GOLGA6L3A6NEY3 463 aa27.37■■□□□ 1.97
TRIM3-201ENST00000345851 TMEM132EQ6IEE7 984 aa27.37■■□□□ 1.97
TRIM3-201ENST00000345851 APAF1O14727 1248 aa27.36■■□□□ 1.97
TRIM3-201ENST00000345851 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
TRIM3-201ENST00000345851 VIRMAQ69YN4 1812 aaKnown RBP27.36■■□□□ 1.97
TRIM3-201ENST00000345851 GLI2P10070 1586 aa27.36■■□□□ 1.97
TRIM3-201ENST00000345851 FBXO31Q5XUX0 539 aaPredicted RBP27.36■■□□□ 1.97
TRIM3-201ENST00000345851 COG6Q9Y2V7 657 aa27.35■■□□□ 1.97
TRIM3-201ENST00000345851 PANK1Q8TE04 598 aa27.34■■□□□ 1.97
TRIM3-201ENST00000345851 CANXP27824 592 aaKnown RBP27.34■■□□□ 1.97
TRIM3-201ENST00000345851 SIGLEC1Q9BZZ2 1709 aa27.33■■□□□ 1.97
TRIM3-201ENST00000345851 MAPK8IP3Q9UPT6 1336 aa27.33■■□□□ 1.97
TRIM3-201ENST00000345851 IDI1Q13907 227 aa27.33■■□□□ 1.97
TRIM3-201ENST00000345851 TBC1D2Q9BYX2 928 aa27.33■■□□□ 1.97
TRIM3-201ENST00000345851 TRAK1Q9UPV9 953 aa27.32■■□□□ 1.96
TRIM3-201ENST00000345851 LAMC1P11047 1609 aa27.31■■□□□ 1.96
TRIM3-201ENST00000345851 DMRT2Q9Y5R5 561 aa27.31■■□□□ 1.96
TRIM3-201ENST00000345851 NKTRP30414 1462 aaKnown RBP27.31■■□□□ 1.96
TRIM3-201ENST00000345851 CLUAP1Q96AJ1 413 aa27.31■■□□□ 1.96
TRIM3-201ENST00000345851 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
TRIM3-201ENST00000345851 NLRP1Q9C000 1473 aa27.31■■□□□ 1.96
TRIM3-201ENST00000345851 UPF2Q9HAU5 1272 aaKnown RBP27.3■■□□□ 1.96
TRIM3-201ENST00000345851 TRMT2AQ8IZ69 625 aaKnown RBP27.3■■□□□ 1.96
TRIM3-201ENST00000345851 CAMSAP1Q5T5Y3 1602 aa27.29■■□□□ 1.96
TRIM3-201ENST00000345851 HSP90AA2PQ14568 343 aaPredicted RBP27.28■■□□□ 1.96
TRIM3-201ENST00000345851 CGNL1Q0VF96 1302 aa27.28■■□□□ 1.96
TRIM3-201ENST00000345851 AMER1Q5JTC6 1135 aaPredicted RBP27.27■■□□□ 1.96
TRIM3-201ENST00000345851 STAC3Q96MF2 364 aa27.27■■□□□ 1.96
TRIM3-201ENST00000345851 HSP90AA1P07900 732 aaKnown RBP27.27■■□□□ 1.96
TRIM3-201ENST00000345851 CLCN1P35523 988 aa27.27■■□□□ 1.96
TRIM3-201ENST00000345851 ZMYND15Q9H091 742 aa27.26■■□□□ 1.95
TRIM3-201ENST00000345851 IQGAP1P46940 1657 aa27.26■■□□□ 1.95
TRIM3-201ENST00000345851 ADGRB3O60242 1522 aa27.25■■□□□ 1.95
TRIM3-201ENST00000345851 FSD2A1L4K1 749 aa27.25■■□□□ 1.95
TRIM3-201ENST00000345851 MCM4P33991 863 aa27.25■■□□□ 1.95
TRIM3-201ENST00000345851 TBC1D32Q96NH3 1257 aa27.25■■□□□ 1.95
TRIM3-201ENST00000345851 E9PSI1 815 aa27.23■■□□□ 1.95
TRIM3-201ENST00000345851 SYNMO15061 1565 aa27.22■■□□□ 1.95
TRIM3-201ENST00000345851 MYOM2P54296 1465 aa27.21■■□□□ 1.95
TRIM3-201ENST00000345851 CENPJQ9HC77 1338 aaPredicted RBP27.21■■□□□ 1.95
TRIM3-201ENST00000345851 PDE3AQ14432 1141 aa27.2■■□□□ 1.95
TRIM3-201ENST00000345851 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
TRIM3-201ENST00000345851 IFT172Q9UG01 1749 aa27.19■■□□□ 1.94
TRIM3-201ENST00000345851 TRAK2O60296 914 aa27.18■■□□□ 1.94
TRIM3-201ENST00000345851 C14orf93Q9H972 538 aaKnown RBP27.17■■□□□ 1.94
TRIM3-201ENST00000345851 PDZRN3Q9UPQ7 1066 aa27.16■■□□□ 1.94
TRIM3-201ENST00000345851 TNNQ9UQP3 1299 aa27.16■■□□□ 1.94
TRIM3-201ENST00000345851 PCDHB15Q9Y5E8 787 aa27.16■■□□□ 1.94
TRIM3-201ENST00000345851 STK26Q9P289 416 aa27.15■■□□□ 1.94
TRIM3-201ENST00000345851 KIF13AQ9H1H9 1805 aa27.15■■□□□ 1.94
TRIM3-201ENST00000345851 RRP9O43818 475 aaKnown RBP27.14■■□□□ 1.94
TRIM3-201ENST00000345851 STAG3Q9UJ98 1225 aa27.14■■□□□ 1.94
TRIM3-201ENST00000345851 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
TRIM3-201ENST00000345851 NEUROD2Q15784 382 aa27.14■■□□□ 1.93
TRIM3-201ENST00000345851 PPLO60437 1756 aa27.13■■□□□ 1.93
TRIM3-201ENST00000345851 NEURL4Q96JN8 1562 aa27.13■■□□□ 1.93
TRIM3-201ENST00000345851 BCL2L13Q9BXK5 485 aa27.12■■□□□ 1.93
TRIM3-201ENST00000345851 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
TRIM3-201ENST00000345851 MRE11P49959 708 aa27.11■■□□□ 1.93
TRIM3-201ENST00000345851 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
TRIM3-201ENST00000345851 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
TRIM3-201ENST00000345851 PMFBP1Q8TBY8 1022 aa27.11■■□□□ 1.93
TRIM3-201ENST00000345851 CDCA8Q53HL2 280 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 MYO5BQ9ULV0 1848 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 RLBP1P12271 317 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 SLC52A1Q9NWF4 448 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 CHMP5Q9NZZ3 219 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 KIAA1210Q9ULL0 1709 aa27.1■■□□□ 1.93
TRIM3-201ENST00000345851 ERBB4Q15303 1308 aa27.09■■□□□ 1.93
TRIM3-201ENST00000345851 MFAP1P55081 439 aaKnown RBP27.09■■□□□ 1.93
TRIM3-201ENST00000345851 GRPEL1Q9HAV7 217 aa27.09■■□□□ 1.93
TRIM3-201ENST00000345851 ARHGAP31Q2M1Z3 1444 aa27.09■■□□□ 1.93
TRIM3-201ENST00000345851 ASXL1Q8IXJ9 1541 aa27.09■■□□□ 1.93
TRIM3-201ENST00000345851 ERVK-7P63135 1459 aa27.08■■□□□ 1.93
TRIM3-201ENST00000345851 ESPNB1AK53 854 aa27.08■■□□□ 1.93
TRIM3-201ENST00000345851 RPGRIP1LQ68CZ1 1315 aa27.08■■□□□ 1.93
TRIM3-201ENST00000345851 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
TRIM3-201ENST00000345851 RRP7AQ9Y3A4 280 aaKnown RBP27.06■■□□□ 1.92
TRIM3-201ENST00000345851 PIK3C2BO00750 1634 aa27.06■■□□□ 1.92
TRIM3-201ENST00000345851 WWC1Q8IX03 1113 aa27.06■■□□□ 1.92
TRIM3-201ENST00000345851 PREX1Q8TCU6 1659 aa27.05■■□□□ 1.92
TRIM3-201ENST00000345851 C22orf23Q9BZE7 217 aa27.05■■□□□ 1.92
TRIM3-201ENST00000345851 NEXMIFQ5QGS0 1516 aa27.04■■□□□ 1.92
TRIM3-201ENST00000345851 NINLQ9Y2I6 1382 aa27.03■■□□□ 1.92
TRIM3-201ENST00000345851 CARD14Q9BXL6 1004 aa27.03■■□□□ 1.92
TRIM3-201ENST00000345851 SLC12A5Q9H2X9 1139 aa27.03■■□□□ 1.92
TRIM3-201ENST00000345851 ZC3H13Q5T200 1668 aaKnown RBP27.03■■□□□ 1.92
TRIM3-201ENST00000345851 CLTCQ00610 1675 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms