RNA–Protein interactions for RNA: ENST00000344850.8

GTDC1-202, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-202ENST00000344850 FAM212AQ96EL1 285 aa6.66□□□□□ -1.34
GTDC1-202ENST00000344850 DCCP43146 1447 aa6.66□□□□□ -1.34
GTDC1-202ENST00000344850 ZNF772Q68DY9 489 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-202ENST00000344850 TRAIPQ9BWF2 469 aa6.66□□□□□ -1.34
GTDC1-202ENST00000344850 PIK3R4Q99570 1358 aa6.65□□□□□ -1.34
GTDC1-202ENST00000344850 CHD2O14647 1828 aaKnown RBP6.65□□□□□ -1.34
GTDC1-202ENST00000344850 POTEAQ6S8J7 498 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 CCDC82Q8N4S0 544 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 UPF1Q92900 1129 aaKnown RBP eCLIP6.64□□□□□ -1.35
GTDC1-202ENST00000344850 DUOX2Q9NRD8 1548 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 KCNA6P17658 529 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 NHSL1Q5SYE7 1610 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 CCNB3Q8WWL7 1395 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 ADGRB3O60242 1522 aa6.64□□□□□ -1.35
GTDC1-202ENST00000344850 KRI1Q8N9T8 703 aaKnown RBP6.63□□□□□ -1.35
GTDC1-202ENST00000344850 SPHKAPQ2M3C7 1700 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 ERBINQ96RT1 1412 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 PDE4DQ08499 809 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 A6NJR5 290 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 TRIM66O15016 1216 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 ABCB7O75027 752 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 PIP4K2BP78356 416 aa6.63□□□□□ -1.35
GTDC1-202ENST00000344850 RPRD2Q5VT52 1461 aaKnown RBP6.62□□□□□ -1.35
GTDC1-202ENST00000344850 RAD21O60216 631 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 EFCAB6Q5THR3 1501 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 SETD5Q9C0A6 1442 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 CEP152O94986 1710 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 TMEM2Q9UHN6 1383 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 CCDC125Q86Z20 511 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 RGS22Q8NE09 1264 aa6.62□□□□□ -1.35
GTDC1-202ENST00000344850 PIK3C2BO00750 1634 aa6.61□□□□□ -1.35
GTDC1-202ENST00000344850 TRAK2O60296 914 aa6.61□□□□□ -1.35
GTDC1-202ENST00000344850 PRAG1Q86YV5 1406 aa6.61□□□□□ -1.35
GTDC1-202ENST00000344850 UNC13BO14795 1591 aa6.61□□□□□ -1.35
GTDC1-202ENST00000344850 COL22A1Q8NFW1 1626 aaPredicted RBP6.61□□□□□ -1.35
GTDC1-202ENST00000344850 CROCC2H7BZ55 1655 aa6.61□□□□□ -1.35
GTDC1-202ENST00000344850 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.6□□□□□ -1.35
GTDC1-202ENST00000344850 ZNF316A6NFI3 1004 aaPredicted RBP6.6□□□□□ -1.35
GTDC1-202ENST00000344850 MYT1Q01538 1121 aa6.6□□□□□ -1.35
GTDC1-202ENST00000344850 NOS1P29475 1434 aa6.6□□□□□ -1.35
GTDC1-202ENST00000344850 CFDP1Q9UEE9 299 aaPredicted RBP6.6□□□□□ -1.35
GTDC1-202ENST00000344850 LRP6O75581 1613 aa6.59□□□□□ -1.35
GTDC1-202ENST00000344850 MYT1LQ9UL68 1186 aa6.59□□□□□ -1.35
GTDC1-202ENST00000344850 PLEKHG1Q9ULL1 1385 aa6.59□□□□□ -1.35
GTDC1-202ENST00000344850 IGSF3O75054 1194 aa6.59□□□□□ -1.36
GTDC1-202ENST00000344850 PPARGC1BQ86YN6 1023 aaKnown RBP6.59□□□□□ -1.36
GTDC1-202ENST00000344850 GPIHBP1Q8IV16 184 aa6.59□□□□□ -1.36
GTDC1-202ENST00000344850 MSH6P52701 1360 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 FAM117AQ9C073 453 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
GTDC1-202ENST00000344850 ONECUT3O60422 494 aaPredicted RBP6.58□□□□□ -1.36
GTDC1-202ENST00000344850 EID1Q9Y6B2 187 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 WASHC2CQ9Y4E1 1318 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 TMEM94Q12767 1356 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 MTUS2Q5JR59 1369 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 ZFYVE9O95405 1425 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 PTCH1Q13635 1447 aa6.58□□□□□ -1.36
GTDC1-202ENST00000344850 HNRNPMP52272 730 aaKnown RBP eCLIP6.57□□□□□ -1.36
GTDC1-202ENST00000344850 ATAD2Q6PL18 1390 aa6.57□□□□□ -1.36
GTDC1-202ENST00000344850 XRN1Q8IZH2 1706 aaKnown RBP6.57□□□□□ -1.36
GTDC1-202ENST00000344850 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.56□□□□□ -1.36
GTDC1-202ENST00000344850 IQGAP3Q86VI3 1631 aa6.56□□□□□ -1.36
GTDC1-202ENST00000344850 GGT6Q6P531 493 aa6.56□□□□□ -1.36
GTDC1-202ENST00000344850 TRPM2O94759 1503 aa6.56□□□□□ -1.36
GTDC1-202ENST00000344850 DDRGK1Q96HY6 314 aa6.56□□□□□ -1.36
GTDC1-202ENST00000344850 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
GTDC1-202ENST00000344850 FBXO31Q5XUX0 539 aaPredicted RBP6.55□□□□□ -1.36
GTDC1-202ENST00000344850 AEBP1Q8IUX7 1158 aa6.55□□□□□ -1.36
GTDC1-202ENST00000344850 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
GTDC1-202ENST00000344850 PLEKHG3A1L390 1219 aa6.55□□□□□ -1.36
GTDC1-202ENST00000344850 RBM26Q5T8P6 1007 aaKnown RBP6.55□□□□□ -1.36
GTDC1-202ENST00000344850 CLUAP1Q96AJ1 413 aa6.55□□□□□ -1.36
GTDC1-202ENST00000344850 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 PYGBP11216 843 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 RXRBP28702 533 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 MFRPQ9BY79 579 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 MARF1Q9Y4F3 1742 aaKnown RBP6.54□□□□□ -1.36
GTDC1-202ENST00000344850 HDGFP51858 240 aaKnown RBP6.54□□□□□ -1.36
GTDC1-202ENST00000344850 TBX22Q9Y458 520 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 RGS12O14924 1447 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 TMEM131LA2VDJ0 1609 aa6.54□□□□□ -1.36
GTDC1-202ENST00000344850 SETBP1Q9Y6X0 1596 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 ASXL1Q8IXJ9 1541 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 KIF3BO15066 747 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 SLC52A1Q9NWF4 448 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 ATRNO75882 1429 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 HMGB1P09429 215 aaKnown RBP6.53□□□□□ -1.36
GTDC1-202ENST00000344850 RBM6P78332 1123 aaKnown RBP6.53□□□□□ -1.36
GTDC1-202ENST00000344850 RASEFQ8IZ41 740 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 MYOM3Q5VTT5 1437 aa6.53□□□□□ -1.36
GTDC1-202ENST00000344850 ADGRL2O95490 1459 aa6.52□□□□□ -1.36
GTDC1-202ENST00000344850 LTKP29376 864 aa6.52□□□□□ -1.37
GTDC1-202ENST00000344850 TXNDC2Q86VQ3 553 aa6.52□□□□□ -1.37
GTDC1-202ENST00000344850 SERPINA10Q9UK55 444 aa6.52□□□□□ -1.37
GTDC1-202ENST00000344850 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
GTDC1-202ENST00000344850 GOPCQ9HD26 462 aa6.52□□□□□ -1.37
GTDC1-202ENST00000344850 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.51□□□□□ -1.37
GTDC1-202ENST00000344850 KANK1Q14678 1352 aa6.51□□□□□ -1.37
GTDC1-202ENST00000344850 PPP1R37O75864 691 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms