RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PXDNQ92626 1479 aa25.13■■□□□ 1.61
NECTIN1-202ENST00000340882 BRWD3Q6RI45 1802 aa25.12■■□□□ 1.61
NECTIN1-202ENST00000340882 PRAG1Q86YV5 1406 aa25.11■■□□□ 1.61
NECTIN1-202ENST00000340882 XPCQ01831 940 aaPredicted RBP25.1■■□□□ 1.61
NECTIN1-202ENST00000340882 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
NECTIN1-202ENST00000340882 FOXD1Q16676 465 aa25.09■■□□□ 1.61
NECTIN1-202ENST00000340882 GJD4Q96KN9 370 aaPredicted RBP25.09■■□□□ 1.61
NECTIN1-202ENST00000340882 GLI3P10071 1580 aa25.09■■□□□ 1.61
NECTIN1-202ENST00000340882 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.09■■□□□ 1.61
NECTIN1-202ENST00000340882 ESCO1Q5FWF5 840 aa25.08■■□□□ 1.61
NECTIN1-202ENST00000340882 PPLO60437 1756 aa25.06■■□□□ 1.6
NECTIN1-202ENST00000340882 NPHP3Q7Z494 1330 aa25.06■■□□□ 1.6
NECTIN1-202ENST00000340882 CDC42BPGQ6DT37 1551 aa25.05■■□□□ 1.6
NECTIN1-202ENST00000340882 HFM1A2PYH4 1435 aa25.05■■□□□ 1.6
NECTIN1-202ENST00000340882 FOXO3O43524 673 aa25.05■■□□□ 1.6
NECTIN1-202ENST00000340882 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
NECTIN1-202ENST00000340882 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
NECTIN1-202ENST00000340882 DEFB132Q7Z7B7 95 aa25.03■■□□□ 1.6
NECTIN1-202ENST00000340882 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
NECTIN1-202ENST00000340882 SLIT2O94813 1529 aa25.01■■□□□ 1.59
NECTIN1-202ENST00000340882 NUTM2FA1L443 756 aa25■■□□□ 1.59
NECTIN1-202ENST00000340882 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
NECTIN1-202ENST00000340882 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
NECTIN1-202ENST00000340882 NAIPQ13075 1403 aa24.97■■□□□ 1.59
NECTIN1-202ENST00000340882 USP32Q8NFA0 1604 aa24.95■■□□□ 1.58
NECTIN1-202ENST00000340882 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.58
NECTIN1-202ENST00000340882 LRP5O75197 1615 aa24.94■■□□□ 1.58
NECTIN1-202ENST00000340882 RPGRIP1LQ68CZ1 1315 aa24.94■■□□□ 1.58
NECTIN1-202ENST00000340882 RGPD8O14715 1765 aaPredicted RBP24.93■■□□□ 1.58
NECTIN1-202ENST00000340882 FMN2Q9NZ56 1722 aa24.93■■□□□ 1.58
NECTIN1-202ENST00000340882 SPATA31A3Q5VYP0 1347 aa24.92■■□□□ 1.58
NECTIN1-202ENST00000340882 PLEKHH1Q9ULM0 1364 aa24.92■■□□□ 1.58
NECTIN1-202ENST00000340882 SEPT12Q8IYM1 358 aa24.91■■□□□ 1.58
NECTIN1-202ENST00000340882 STK26Q9P289 416 aa24.91■■□□□ 1.58
NECTIN1-202ENST00000340882 LRPPRCP42704 1394 aaKnown RBP24.91■■□□□ 1.58
NECTIN1-202ENST00000340882 PLCH1Q4KWH8 1693 aa24.91■■□□□ 1.58
NECTIN1-202ENST00000340882 ADGRF5Q8IZF2 1346 aa24.89■■□□□ 1.58
NECTIN1-202ENST00000340882 KIF1AQ12756 1690 aa24.88■■□□□ 1.57
NECTIN1-202ENST00000340882 TECPR2O15040 1411 aa24.87■■□□□ 1.57
NECTIN1-202ENST00000340882 KNDC1Q76NI1 1749 aa24.87■■□□□ 1.57
NECTIN1-202ENST00000340882 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
NECTIN1-202ENST00000340882 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
NECTIN1-202ENST00000340882 NWD2Q9ULI1 1742 aa24.86■■□□□ 1.57
NECTIN1-202ENST00000340882 KRT28Q7Z3Y7 464 aa24.85■■□□□ 1.57
NECTIN1-202ENST00000340882 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
NECTIN1-202ENST00000340882 PSDA5PKW4 1024 aaPredicted RBP24.84■■□□□ 1.57
NECTIN1-202ENST00000340882 PLEKHG5O94827 1062 aa24.84■■□□□ 1.57
NECTIN1-202ENST00000340882 SF3B2Q13435 895 aaKnown RBP24.84■■□□□ 1.57
NECTIN1-202ENST00000340882 VPS72Q15906 364 aa24.84■■□□□ 1.57
NECTIN1-202ENST00000340882 TMEM132EQ6IEE7 984 aa24.84■■□□□ 1.57
NECTIN1-202ENST00000340882 ONECUT3O60422 494 aaPredicted RBP24.83■■□□□ 1.57
NECTIN1-202ENST00000340882 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
NECTIN1-202ENST00000340882 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
NECTIN1-202ENST00000340882 KRT27Q7Z3Y8 459 aa24.81■■□□□ 1.56
NECTIN1-202ENST00000340882 ABCC11Q96J66 1382 aa24.8■■□□□ 1.56
NECTIN1-202ENST00000340882 TNS3Q68CZ2 1445 aa24.8■■□□□ 1.56
NECTIN1-202ENST00000340882 SLC4A1APQ9BWU0 796 aaKnown RBP24.8■■□□□ 1.56
NECTIN1-202ENST00000340882 CCDC9Q9Y3X0 531 aaKnown RBP24.79■■□□□ 1.56
NECTIN1-202ENST00000340882 HRCP23327 699 aa24.78■■□□□ 1.56
NECTIN1-202ENST00000340882 NRAPQ86VF7 1730 aa24.78■■□□□ 1.56
NECTIN1-202ENST00000340882 HAP1P54257 671 aaPredicted RBP24.77■■□□□ 1.56
NECTIN1-202ENST00000340882 RGL3Q3MIN7 710 aa24.77■■□□□ 1.56
NECTIN1-202ENST00000340882 FAM83GA6ND36 823 aa24.75■■□□□ 1.55
NECTIN1-202ENST00000340882 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
NECTIN1-202ENST00000340882 SPATA31E1Q6ZUB1 1445 aa24.75■■□□□ 1.55
NECTIN1-202ENST00000340882 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
NECTIN1-202ENST00000340882 PIK3C2GO75747 1445 aa24.72■■□□□ 1.55
NECTIN1-202ENST00000340882 BAG6P46379 1132 aa24.72■■□□□ 1.55
NECTIN1-202ENST00000340882 NRXN1Q9ULB1 1477 aa24.71■■□□□ 1.55
NECTIN1-202ENST00000340882 FAM182BQ5T319 152 aa24.71■■□□□ 1.55
NECTIN1-202ENST00000340882 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
NECTIN1-202ENST00000340882 RGPD1P0DJD0 1748 aa24.71■■□□□ 1.55
NECTIN1-202ENST00000340882 SBNO1A3KN83 1393 aa24.7■■□□□ 1.55
NECTIN1-202ENST00000340882 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
NECTIN1-202ENST00000340882 PSME1Q06323 249 aa24.7■■□□□ 1.54
NECTIN1-202ENST00000340882 FAM98CQ17RN3 349 aaKnown RBP24.7■■□□□ 1.54
NECTIN1-202ENST00000340882 A0A0G2JS52 829 aa24.69■■□□□ 1.54
NECTIN1-202ENST00000340882 MYT1Q01538 1121 aa24.69■■□□□ 1.54
NECTIN1-202ENST00000340882 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
NECTIN1-202ENST00000340882 TNS1Q9HBL0 1735 aaKnown RBP24.68■■□□□ 1.54
NECTIN1-202ENST00000340882 TRPM3Q9HCF6 1732 aaPredicted RBP24.67■■□□□ 1.54
NECTIN1-202ENST00000340882 R3HDM1Q15032 1099 aaKnown RBP24.66■■□□□ 1.54
NECTIN1-202ENST00000340882 SIRT1Q96EB6 747 aa24.65■■□□□ 1.54
NECTIN1-202ENST00000340882 BTG4Q9NY30 223 aa24.65■■□□□ 1.54
NECTIN1-202ENST00000340882 ARHGEF10O15013 1369 aa24.65■■□□□ 1.54
NECTIN1-202ENST00000340882 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
NECTIN1-202ENST00000340882 PMFBP1Q8TBY8 1022 aa24.64■■□□□ 1.54
NECTIN1-202ENST00000340882 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
NECTIN1-202ENST00000340882 COL14A1Q05707 1796 aaKnown RBP24.63■■□□□ 1.53
NECTIN1-202ENST00000340882 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
NECTIN1-202ENST00000340882 CRYBG1Q9Y4K1 1723 aa24.61■■□□□ 1.53
NECTIN1-202ENST00000340882 CFAP70Q5T0N1 1121 aa24.6■■□□□ 1.53
NECTIN1-202ENST00000340882 C14orf93Q9H972 538 aaKnown RBP24.6■■□□□ 1.53
NECTIN1-202ENST00000340882 EZH2Q15910 746 aaKnown RBP24.59■■□□□ 1.53
NECTIN1-202ENST00000340882 PRAM1Q96QH2 718 aa24.59■■□□□ 1.53
NECTIN1-202ENST00000340882 DISP2A7MBM2 1401 aa24.58■■□□□ 1.53
NECTIN1-202ENST00000340882 SPATA31A5Q5VU36 1347 aa24.58■■□□□ 1.52
NECTIN1-202ENST00000340882 SPATA31A7Q8IWB4 1347 aa24.58■■□□□ 1.52
NECTIN1-202ENST00000340882 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
NECTIN1-202ENST00000340882 ANKARQ7Z5J8 1434 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms