RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 AGLP35573 1532 aa19.83■□□□□ 0.76
LIMK2-203ENST00000340552 C20orf194Q5TEA3 1177 aa19.82■□□□□ 0.76
LIMK2-203ENST00000340552 ARXQ96QS3 562 aa19.82■□□□□ 0.76
LIMK2-203ENST00000340552 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
LIMK2-203ENST00000340552 XRCC6P12956 609 aaKnown RBP eCLIP19.81■□□□□ 0.76
LIMK2-203ENST00000340552 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
LIMK2-203ENST00000340552 EIF3AQ14152 1382 aaKnown RBP19.81■□□□□ 0.76
LIMK2-203ENST00000340552 VIRMAQ69YN4 1812 aaKnown RBP19.8■□□□□ 0.76
LIMK2-203ENST00000340552 PREX1Q8TCU6 1659 aa19.8■□□□□ 0.76
LIMK2-203ENST00000340552 IDI1Q13907 227 aa19.8■□□□□ 0.76
LIMK2-203ENST00000340552 CENPQQ7L2Z9 268 aaPredicted RBP19.8■□□□□ 0.76
LIMK2-203ENST00000340552 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
LIMK2-203ENST00000340552 ARHGEF40Q8TER5 1519 aa19.78■□□□□ 0.76
LIMK2-203ENST00000340552 PANK2Q9BZ23 570 aa19.78■□□□□ 0.76
LIMK2-203ENST00000340552 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
LIMK2-203ENST00000340552 PIK3C2GO75747 1445 aa19.77■□□□□ 0.76
LIMK2-203ENST00000340552 FBXO31Q5XUX0 539 aaPredicted RBP19.75■□□□□ 0.75
LIMK2-203ENST00000340552 RGS3P49796 1198 aa19.75■□□□□ 0.75
LIMK2-203ENST00000340552 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
LIMK2-203ENST00000340552 MLECQ14165 292 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 SLKQ9H2G2 1235 aaPredicted RBP19.74■□□□□ 0.75
LIMK2-203ENST00000340552 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
LIMK2-203ENST00000340552 SETBP1Q9Y6X0 1596 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 USP19O94966 1318 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 CDCA8Q53HL2 280 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 PANK3Q9H999 370 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 NEXMIFQ5QGS0 1516 aa19.74■□□□□ 0.75
LIMK2-203ENST00000340552 CLTCQ00610 1675 aaKnown RBP19.74■□□□□ 0.75
LIMK2-203ENST00000340552 FSD2A1L4K1 749 aa19.73■□□□□ 0.75
LIMK2-203ENST00000340552 NUTM2DQ5VT03 806 aaPredicted RBP19.73■□□□□ 0.75
LIMK2-203ENST00000340552 VGFO15240 615 aaPredicted RBP19.73■□□□□ 0.75
LIMK2-203ENST00000340552 RALBP1Q15311 655 aa19.73■□□□□ 0.75
LIMK2-203ENST00000340552 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
LIMK2-203ENST00000340552 GOLGA6L3A6NEY3 463 aa19.72■□□□□ 0.75
LIMK2-203ENST00000340552 ERVK-7P63135 1459 aa19.72■□□□□ 0.75
LIMK2-203ENST00000340552 TMEM131LA2VDJ0 1609 aa19.7■□□□□ 0.74
LIMK2-203ENST00000340552 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
LIMK2-203ENST00000340552 ADGRB1O14514 1584 aa19.69■□□□□ 0.74
LIMK2-203ENST00000340552 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
LIMK2-203ENST00000340552 ANTXR1Q9H6X2 564 aa19.68■□□□□ 0.74
LIMK2-203ENST00000340552 MYO3AQ8NEV4 1616 aa19.68■□□□□ 0.74
LIMK2-203ENST00000340552 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
LIMK2-203ENST00000340552 PARD3Q8TEW0 1356 aa19.67■□□□□ 0.74
LIMK2-203ENST00000340552 KDM5AP29375 1690 aaKnown RBP19.66■□□□□ 0.74
LIMK2-203ENST00000340552 ZFYVE9O95405 1425 aa19.66■□□□□ 0.74
LIMK2-203ENST00000340552 ERBB4Q15303 1308 aa19.66■□□□□ 0.74
LIMK2-203ENST00000340552 CENPJQ9HC77 1338 aaPredicted RBP19.66■□□□□ 0.74
LIMK2-203ENST00000340552 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
LIMK2-203ENST00000340552 CC2D1BQ5T0F9 858 aaKnown RBP19.65■□□□□ 0.74
LIMK2-203ENST00000340552 GZF1Q9H116 711 aaPredicted RBP19.65■□□□□ 0.74
LIMK2-203ENST00000340552 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.74
LIMK2-203ENST00000340552 STAG3Q9UJ98 1225 aa19.64■□□□□ 0.73
LIMK2-203ENST00000340552 SPATA31D1Q6ZQQ2 1576 aa19.64■□□□□ 0.73
LIMK2-203ENST00000340552 SEC24BO95487 1268 aa19.64■□□□□ 0.73
LIMK2-203ENST00000340552 BECN1Q14457 450 aa19.64■□□□□ 0.73
LIMK2-203ENST00000340552 ESF1Q9H501 851 aaKnown RBP19.64■□□□□ 0.73
LIMK2-203ENST00000340552 MYOM1P52179 1685 aa19.63■□□□□ 0.73
LIMK2-203ENST00000340552 ESPNB1AK53 854 aa19.62■□□□□ 0.73
LIMK2-203ENST00000340552 PDCL3Q9H2J4 239 aa19.62■□□□□ 0.73
LIMK2-203ENST00000340552 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
LIMK2-203ENST00000340552 PRDM4Q9UKN5 801 aa19.61■□□□□ 0.73
LIMK2-203ENST00000340552 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
LIMK2-203ENST00000340552 RBM10P98175 930 aaKnown RBP19.61■□□□□ 0.73
LIMK2-203ENST00000340552 QRICH2Q9H0J4 1663 aa19.6■□□□□ 0.73
LIMK2-203ENST00000340552 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
LIMK2-203ENST00000340552 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
LIMK2-203ENST00000340552 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
LIMK2-203ENST00000340552 CALD1Q05682 793 aaKnown RBP19.59■□□□□ 0.73
LIMK2-203ENST00000340552 A0A0U1RQG5 324 aaPredicted RBP19.58■□□□□ 0.73
LIMK2-203ENST00000340552 TPM2P07951 284 aa19.58■□□□□ 0.73
LIMK2-203ENST00000340552 MRE11P49959 708 aa19.57■□□□□ 0.72
LIMK2-203ENST00000340552 ARHGEF28Q8N1W1 1705 aaKnown RBP19.57■□□□□ 0.72
LIMK2-203ENST00000340552 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
LIMK2-203ENST00000340552 MCM4P33991 863 aa19.56■□□□□ 0.72
LIMK2-203ENST00000340552 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
LIMK2-203ENST00000340552 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
LIMK2-203ENST00000340552 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
LIMK2-203ENST00000340552 ASXL1Q8IXJ9 1541 aa19.55■□□□□ 0.72
LIMK2-203ENST00000340552 GRPEL1Q9HAV7 217 aa19.53■□□□□ 0.72
LIMK2-203ENST00000340552 STK26Q9P289 416 aa19.53■□□□□ 0.72
LIMK2-203ENST00000340552 AAMPQ13685 434 aa19.52■□□□□ 0.72
LIMK2-203ENST00000340552 TBC1D2Q9BYX2 928 aa19.52■□□□□ 0.72
LIMK2-203ENST00000340552 INSRP06213 1382 aa19.52■□□□□ 0.71
LIMK2-203ENST00000340552 TRAK2O60296 914 aa19.51■□□□□ 0.71
LIMK2-203ENST00000340552 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
LIMK2-203ENST00000340552 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
LIMK2-203ENST00000340552 DUSP27Q5VZP5 1158 aa19.5■□□□□ 0.71
LIMK2-203ENST00000340552 NPC1L1Q9UHC9 1359 aa19.5■□□□□ 0.71
LIMK2-203ENST00000340552 IGHDP01880 384 aa19.49■□□□□ 0.71
LIMK2-203ENST00000340552 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
LIMK2-203ENST00000340552 KIAA1211Q6ZU35 1233 aa19.49■□□□□ 0.71
LIMK2-203ENST00000340552 SPRYD3Q8NCJ5 442 aa19.49■□□□□ 0.71
LIMK2-203ENST00000340552 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
LIMK2-203ENST00000340552 TNRQ92752 1358 aa19.48■□□□□ 0.71
LIMK2-203ENST00000340552 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
LIMK2-203ENST00000340552 CARD14Q9BXL6 1004 aa19.48■□□□□ 0.71
LIMK2-203ENST00000340552 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
LIMK2-203ENST00000340552 TULP4Q9NRJ4 1543 aa19.47■□□□□ 0.71
LIMK2-203ENST00000340552 PPP2R1AP30153 589 aa19.47■□□□□ 0.71
LIMK2-203ENST00000340552 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms