RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 CABP2Q9NPB3 220 aa29.72■■■□□ 2.35
SOX18-201ENST00000340356 AMOTL2Q9Y2J4 779 aa29.72■■■□□ 2.35
SOX18-201ENST00000340356 PER1O15534 1290 aaPredicted RBP29.71■■■□□ 2.35
SOX18-201ENST00000340356 NPHP4O75161 1426 aaPredicted RBP29.71■■■□□ 2.35
SOX18-201ENST00000340356 SIRT1Q96EB6 747 aa29.7■■■□□ 2.35
SOX18-201ENST00000340356 YTHDC1Q96MU7 727 aaKnown RBP29.7■■■□□ 2.35
SOX18-201ENST00000340356 PRKRIP1Q9H875 184 aaPredicted RBP29.7■■■□□ 2.35
SOX18-201ENST00000340356 HSPA2P54652 639 aa29.68■■■□□ 2.34
SOX18-201ENST00000340356 SRPK2P78362 688 aaKnown RBP29.67■■■□□ 2.34
SOX18-201ENST00000340356 XRN1Q8IZH2 1706 aaKnown RBP29.66■■■□□ 2.34
SOX18-201ENST00000340356 CDK19Q9BWU1 502 aa29.65■■■□□ 2.34
SOX18-201ENST00000340356 TMC1Q8TDI8 760 aa29.65■■■□□ 2.34
SOX18-201ENST00000340356 SLC12A5Q9H2X9 1139 aa29.64■■■□□ 2.34
SOX18-201ENST00000340356 PUS7Q96PZ0 661 aaKnown RBP29.63■■■□□ 2.33
SOX18-201ENST00000340356 LMTK3Q96Q04 1460 aa29.63■■■□□ 2.33
SOX18-201ENST00000340356 PIK3R4Q99570 1358 aa29.63■■■□□ 2.33
SOX18-201ENST00000340356 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.63■■■□□ 2.33
SOX18-201ENST00000340356 KCNA6P17658 529 aa29.62■■■□□ 2.33
SOX18-201ENST00000340356 PTCH1Q13635 1447 aa29.62■■■□□ 2.33
SOX18-201ENST00000340356 CHD2O14647 1828 aaKnown RBP29.6■■■□□ 2.33
SOX18-201ENST00000340356 CCER2I3L3R5 266 aa29.59■■■□□ 2.33
SOX18-201ENST00000340356 WASLO00401 505 aaPredicted RBP29.57■■■□□ 2.32
SOX18-201ENST00000340356 CARD14Q9BXL6 1004 aa29.57■■■□□ 2.32
SOX18-201ENST00000340356 ATAD2Q6PL18 1390 aa29.55■■■□□ 2.32
SOX18-201ENST00000340356 CC2D1BQ5T0F9 858 aaKnown RBP29.55■■■□□ 2.32
SOX18-201ENST00000340356 KNSTRNQ9Y448 316 aa29.55■■■□□ 2.32
SOX18-201ENST00000340356 CENPBP07199 599 aaPredicted RBP29.54■■■□□ 2.32
SOX18-201ENST00000340356 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
SOX18-201ENST00000340356 ADGRB2O60241 1585 aa29.53■■■□□ 2.32
SOX18-201ENST00000340356 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
SOX18-201ENST00000340356 AMER1Q5JTC6 1135 aaPredicted RBP29.51■■■□□ 2.31
SOX18-201ENST00000340356 RBM33Q96EV2 1170 aaKnown RBP29.48■■■□□ 2.31
SOX18-201ENST00000340356 ANKRD36BQ8N2N9 1353 aa29.48■■■□□ 2.31
SOX18-201ENST00000340356 PARD3Q8TEW0 1356 aa29.48■■■□□ 2.31
SOX18-201ENST00000340356 NSD3Q9BZ95 1437 aa29.48■■■□□ 2.31
SOX18-201ENST00000340356 CABP1Q9NZU7 370 aa29.48■■■□□ 2.31
SOX18-201ENST00000340356 NINLQ9Y2I6 1382 aa29.48■■■□□ 2.31
SOX18-201ENST00000340356 CD163L1Q9NR16 1453 aa29.47■■■□□ 2.31
SOX18-201ENST00000340356 RALBP1Q15311 655 aa29.46■■■□□ 2.31
SOX18-201ENST00000340356 A0A1W2PP64 1363 aa29.46■■■□□ 2.31
SOX18-201ENST00000340356 STRCQ7RTU9 1775 aa29.46■■■□□ 2.31
SOX18-201ENST00000340356 PRR36Q9H6K5 1346 aa29.46■■■□□ 2.31
SOX18-201ENST00000340356 NUDT16Q96DE0 195 aaKnown RBP29.46■■■□□ 2.31
SOX18-201ENST00000340356 NWD1Q149M9 1564 aa29.45■■■□□ 2.3
SOX18-201ENST00000340356 NUTM2FA1L443 756 aa29.44■■■□□ 2.3
SOX18-201ENST00000340356 ATP7BP35670 1465 aa29.44■■■□□ 2.3
SOX18-201ENST00000340356 PPIP5K1Q6PFW1 1433 aa29.42■■■□□ 2.3
SOX18-201ENST00000340356 MYBBP1AQ9BQG0 1328 aaKnown RBP29.41■■■□□ 2.3
SOX18-201ENST00000340356 MRS2Q9HD23 443 aa29.4■■■□□ 2.3
SOX18-201ENST00000340356 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
SOX18-201ENST00000340356 NPC1L1Q9UHC9 1359 aa29.4■■■□□ 2.3
SOX18-201ENST00000340356 TERF2IPQ9NYB0 399 aa29.39■■■□□ 2.3
SOX18-201ENST00000340356 CCDC61Q9Y6R9 512 aa29.38■■■□□ 2.29
SOX18-201ENST00000340356 USP32Q8NFA0 1604 aa29.38■■■□□ 2.29
SOX18-201ENST00000340356 STRCP1A6NGW2 1772 aa29.37■■■□□ 2.29
SOX18-201ENST00000340356 HDGFL2Q7Z4V5 671 aaPredicted RBP29.36■■■□□ 2.29
SOX18-201ENST00000340356 TOPAZ1Q8N9V7 1692 aa29.35■■■□□ 2.29
SOX18-201ENST00000340356 CDC42BPGQ6DT37 1551 aa29.32■■■□□ 2.28
SOX18-201ENST00000340356 CGNL1Q0VF96 1302 aa29.32■■■□□ 2.28
SOX18-201ENST00000340356 CPSF1Q10570 1443 aaKnown RBP29.32■■■□□ 2.28
SOX18-201ENST00000340356 PROSER2Q86WR7 435 aaPredicted RBP29.31■■■□□ 2.28
SOX18-201ENST00000340356 ADGRL3Q9HAR2 1447 aa29.31■■■□□ 2.28
SOX18-201ENST00000340356 RGPD8O14715 1765 aaPredicted RBP29.31■■■□□ 2.28
SOX18-201ENST00000340356 NKTRP30414 1462 aaKnown RBP29.31■■■□□ 2.28
SOX18-201ENST00000340356 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
SOX18-201ENST00000340356 NLRP13Q86W25 1043 aa29.29■■■□□ 2.28
SOX18-201ENST00000340356 BRD4O60885 1362 aaPredicted RBP29.28■■■□□ 2.28
SOX18-201ENST00000340356 PPP2R1AP30153 589 aa29.28■■■□□ 2.28
SOX18-201ENST00000340356 C14orf37Q86TY3 774 aa29.27■■■□□ 2.28
SOX18-201ENST00000340356 ITSN1Q15811 1721 aa29.27■■■□□ 2.28
SOX18-201ENST00000340356 AKAP12Q02952 1782 aa29.26■■■□□ 2.28
SOX18-201ENST00000340356 FAM9BQ8IZU0 186 aa29.26■■■□□ 2.27
SOX18-201ENST00000340356 PLEKHG3A1L390 1219 aa29.25■■■□□ 2.27
SOX18-201ENST00000340356 ACEP12821 1306 aa29.24■■■□□ 2.27
SOX18-201ENST00000340356 MON2Q7Z3U7 1717 aa29.24■■■□□ 2.27
SOX18-201ENST00000340356 MORC1Q86VD1 984 aa29.24■■■□□ 2.27
SOX18-201ENST00000340356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.24■■■□□ 2.27
SOX18-201ENST00000340356 PMFBP1Q8TBY8 1022 aa29.24■■■□□ 2.27
SOX18-201ENST00000340356 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
SOX18-201ENST00000340356 GGNBP2Q9H3C7 697 aa29.23■■■□□ 2.27
SOX18-201ENST00000340356 FYB1O15117 783 aa29.23■■■□□ 2.27
SOX18-201ENST00000340356 TNNT2P45379 298 aaPredicted RBP29.22■■■□□ 2.27
SOX18-201ENST00000340356 NSD2O96028 1365 aa29.22■■■□□ 2.27
SOX18-201ENST00000340356 TMEM94Q12767 1356 aa29.21■■■□□ 2.27
SOX18-201ENST00000340356 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
SOX18-201ENST00000340356 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.27
SOX18-201ENST00000340356 PNISRQ8TF01 805 aaKnown RBP29.19■■■□□ 2.26
SOX18-201ENST00000340356 ZNF335Q9H4Z2 1342 aaPredicted RBP29.19■■■□□ 2.26
SOX18-201ENST00000340356 ZNF692Q9BU19 519 aaPredicted RBP29.17■■■□□ 2.26
SOX18-201ENST00000340356 ANKRD26Q9UPS8 1709 aa29.17■■■□□ 2.26
SOX18-201ENST00000340356 NRKQ7Z2Y5 1582 aa29.15■■■□□ 2.26
SOX18-201ENST00000340356 NME9Q86XW9 330 aa29.14■■■□□ 2.26
SOX18-201ENST00000340356 POLR3AO14802 1390 aaPredicted RBP29.14■■■□□ 2.26
SOX18-201ENST00000340356 USP6P35125 1406 aa29.14■■■□□ 2.26
SOX18-201ENST00000340356 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
SOX18-201ENST00000340356 C19orf44Q9H6X5 657 aa29.14■■■□□ 2.26
SOX18-201ENST00000340356 ZRANB1Q9UGI0 708 aa29.13■■■□□ 2.25
SOX18-201ENST00000340356 XIRP1Q702N8 1843 aaKnown RBP29.12■■■□□ 2.25
SOX18-201ENST00000340356 TTC21BQ7Z4L5 1316 aa29.11■■■□□ 2.25
SOX18-201ENST00000340356 ESCO1Q5FWF5 840 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms