RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 TCP11L2Q8N4U5 519 aa25.5■■□□□ 1.67
UBC-201ENST00000339647 MAST1Q9Y2H9 1570 aa25.49■■□□□ 1.67
UBC-201ENST00000339647 TNNT2P45379 298 aaPredicted RBP25.49■■□□□ 1.67
UBC-201ENST00000339647 SCAPERQ9BY12 1400 aa25.49■■□□□ 1.67
UBC-201ENST00000339647 DDX11L8A8MPP1 907 aa25.48■■□□□ 1.67
UBC-201ENST00000339647 POLR3AO14802 1390 aaPredicted RBP25.47■■□□□ 1.67
UBC-201ENST00000339647 ARHGAP5Q13017 1502 aa25.47■■□□□ 1.67
UBC-201ENST00000339647 HSCBQ8IWL3 235 aa25.47■■□□□ 1.67
UBC-201ENST00000339647 KDM5AP29375 1690 aaKnown RBP25.47■■□□□ 1.67
UBC-201ENST00000339647 GAS2L3Q86XJ1 694 aa25.46■■□□□ 1.67
UBC-201ENST00000339647 RUNDC1Q96C34 613 aa25.46■■□□□ 1.67
UBC-201ENST00000339647 MVPQ14764 893 aaKnown RBP25.46■■□□□ 1.67
UBC-201ENST00000339647 CEP152O94986 1710 aa25.44■■□□□ 1.66
UBC-201ENST00000339647 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
UBC-201ENST00000339647 DUOX2Q9NRD8 1548 aa25.42■■□□□ 1.66
UBC-201ENST00000339647 WDR63Q8IWG1 891 aa25.42■■□□□ 1.66
UBC-201ENST00000339647 TRIM44Q96DX7 344 aaPredicted RBP25.42■■□□□ 1.66
UBC-201ENST00000339647 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
UBC-201ENST00000339647 DDIT3P35638 169 aa25.41■■□□□ 1.66
UBC-201ENST00000339647 TNPO1Q92973 898 aaKnown RBP25.41■■□□□ 1.66
UBC-201ENST00000339647 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
UBC-201ENST00000339647 CFAP70Q5T0N1 1121 aa25.4■■□□□ 1.66
UBC-201ENST00000339647 FTSJ3Q8IY81 847 aaKnown RBP25.4■■□□□ 1.66
UBC-201ENST00000339647 ISY1Q9ULR0 285 aaKnown RBP25.39■■□□□ 1.66
UBC-201ENST00000339647 MORC1Q86VD1 984 aa25.39■■□□□ 1.65
UBC-201ENST00000339647 DZIP1LQ8IYY4 767 aaKnown RBP25.39■■□□□ 1.65
UBC-201ENST00000339647 TTC37Q6PGP7 1564 aa25.38■■□□□ 1.65
UBC-201ENST00000339647 ZKSCAN2Q63HK3 967 aa25.38■■□□□ 1.65
UBC-201ENST00000339647 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
UBC-201ENST00000339647 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
UBC-201ENST00000339647 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
UBC-201ENST00000339647 SHROOM2Q13796 1616 aa25.35■■□□□ 1.65
UBC-201ENST00000339647 STAC3Q96MF2 364 aa25.33■■□□□ 1.65
UBC-201ENST00000339647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.642e-10■□□□□ 10.5
UBC-201ENST00000339647 HDAC1Q13547 482 aaPredicted RBP25.32■■□□□ 1.64
UBC-201ENST00000339647 TSR2Q969E8 191 aaKnown RBP25.32■■□□□ 1.64
UBC-201ENST00000339647 FOXD4L1Q9NU39 408 aa25.32■■□□□ 1.64
UBC-201ENST00000339647 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
UBC-201ENST00000339647 SMC5Q8IY18 1101 aa25.31■■□□□ 1.64
UBC-201ENST00000339647 HSP90AB1P08238 724 aaKnown RBP25.31■■□□□ 1.64
UBC-201ENST00000339647 NSD3Q9BZ95 1437 aa25.31■■□□□ 1.64
UBC-201ENST00000339647 TRPM2O94759 1503 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 RBM25P49756 843 aaKnown RBP25.3■■□□□ 1.64
UBC-201ENST00000339647 MTHFSP49914 203 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 ITPRIPQ8IWB1 547 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 SNX21Q969T3 373 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 TRIM27P14373 513 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 CCDC27Q2M243 656 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 GBP4Q96PP9 640 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 SMC4Q9NTJ3 1288 aa25.3■■□□□ 1.64
UBC-201ENST00000339647 TPM2P07951 284 aa25.29■■□□□ 1.64
UBC-201ENST00000339647 KANK1Q14678 1352 aa25.28■■□□□ 1.64
UBC-201ENST00000339647 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
UBC-201ENST00000339647 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
UBC-201ENST00000339647 KIAA1211Q6ZU35 1233 aa25.27■■□□□ 1.64
UBC-201ENST00000339647 CIZ1Q9ULV3 898 aaPredicted RBP25.26■■□□□ 1.63
UBC-201ENST00000339647 CD2BP2O95400 341 aaKnown RBP25.26■■□□□ 1.63
UBC-201ENST00000339647 SKOR2Q2VWA4 1001 aaPredicted RBP25.26■■□□□ 1.63
UBC-201ENST00000339647 PTPRTO14522 1441 aa25.26■■□□□ 1.63
UBC-201ENST00000339647 SLC24A1O60721 1099 aa25.25■■□□□ 1.63
UBC-201ENST00000339647 EXOSC9Q06265 439 aaKnown RBP25.25■■□□□ 1.63
UBC-201ENST00000339647 DDX19BQ9UMR2 479 aa25.25■■□□□ 1.63
UBC-201ENST00000339647 SSH1Q8WYL5 1049 aa25.24■■□□□ 1.63
UBC-201ENST00000339647 LNPKQ9C0E8 428 aa25.24■■□□□ 1.63
UBC-201ENST00000339647 KIF2CQ99661 725 aa25.23■■□□□ 1.63
UBC-201ENST00000339647 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
UBC-201ENST00000339647 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
UBC-201ENST00000339647 NOB1Q9ULX3 412 aaKnown RBP25.22■■□□□ 1.63
UBC-201ENST00000339647 ATF7IPQ6VMQ6 1270 aa25.21■■□□□ 1.63
UBC-201ENST00000339647 TMEM57Q8N5G2 664 aa25.21■■□□□ 1.63
UBC-201ENST00000339647 PDCL3Q9H2J4 239 aa25.21■■□□□ 1.63
UBC-201ENST00000339647 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
UBC-201ENST00000339647 NASPP49321 788 aaPredicted RBP25.2■■□□□ 1.63
UBC-201ENST00000339647 CCDC173Q0VFZ6 552 aa25.2■■□□□ 1.63
UBC-201ENST00000339647 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.63
UBC-201ENST00000339647 SSFA2P28290 1259 aa25.2■■□□□ 1.62
UBC-201ENST00000339647 CFAP53Q96M91 514 aa25.2■■□□□ 1.62
UBC-201ENST00000339647 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
UBC-201ENST00000339647 PPP1R9BQ96SB3 815 aa25.2■■□□□ 1.62
UBC-201ENST00000339647 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
UBC-201ENST00000339647 NUCB1Q02818 461 aa25.19■■□□□ 1.62
UBC-201ENST00000339647 ZBTB40Q9NUA8 1239 aa25.19■■□□□ 1.62
UBC-201ENST00000339647 ABCA6Q8N139 1617 aa25.18■■□□□ 1.62
UBC-201ENST00000339647 ZSCAN30Q86W11 494 aa25.18■■□□□ 1.62
UBC-201ENST00000339647 AFAP1Q8N556 730 aa25.18■■□□□ 1.62
UBC-201ENST00000339647 CT47B1P0C2W7 299 aaPredicted RBP25.15■■□□□ 1.62
UBC-201ENST00000339647 CHD1LQ86WJ1 897 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 K7ELQ4 463 aaPredicted RBP25.15■■□□□ 1.62
UBC-201ENST00000339647 PTMSP20962 102 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 GAS2L2Q8NHY3 880 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 TRAK1Q9UPV9 953 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 ZCCHC11Q5TAX3 1644 aaKnown RBP25.15■■□□□ 1.62
UBC-201ENST00000339647 MAP3K4Q9Y6R4 1608 aa25.15■■□□□ 1.62
UBC-201ENST00000339647 OFD1O75665 1012 aa25.14■■□□□ 1.62
UBC-201ENST00000339647 UGGT1Q9NYU2 1555 aa25.14■■□□□ 1.61
UBC-201ENST00000339647 RBM10P98175 930 aaKnown RBP25.14■■□□□ 1.61
UBC-201ENST00000339647 DDX49Q9Y6V7 483 aaKnown RBP25.14■■□□□ 1.61
UBC-201ENST00000339647 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms