RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PPLO60437 1756 aa23.46■■□□□ 1.35
LINC01116-202ENST00000339037 LAMC1P11047 1609 aa23.46■■□□□ 1.35
LINC01116-202ENST00000339037 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
LINC01116-202ENST00000339037 RNF216Q9NWF9 866 aaPredicted RBP23.45■■□□□ 1.34
LINC01116-202ENST00000339037 ADAMTS2O95450 1211 aa23.44■■□□□ 1.34
LINC01116-202ENST00000339037 RBM6P78332 1123 aaKnown RBP23.43■■□□□ 1.34
LINC01116-202ENST00000339037 NGLY1Q96IV0 654 aa23.43■■□□□ 1.34
LINC01116-202ENST00000339037 QTRT2Q9H974 415 aaKnown RBP23.43■■□□□ 1.34
LINC01116-202ENST00000339037 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
LINC01116-202ENST00000339037 RGS12O14924 1447 aa23.42■■□□□ 1.34
LINC01116-202ENST00000339037 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
LINC01116-202ENST00000339037 ADGRF5Q8IZF2 1346 aa23.38■■□□□ 1.33
LINC01116-202ENST00000339037 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 EP400Q96L91 3159 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 RGL3Q3MIN7 710 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 ESCO1Q5FWF5 840 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 ANKRD30BQ9BXX2 1392 aa23.36■■□□□ 1.33
LINC01116-202ENST00000339037 TECPR2O15040 1411 aa23.35■■□□□ 1.33
LINC01116-202ENST00000339037 STK26Q9P289 416 aa23.34■■□□□ 1.33
LINC01116-202ENST00000339037 USP21Q9UK80 565 aa23.34■■□□□ 1.33
LINC01116-202ENST00000339037 MPHOSPH9Q99550 1183 aa23.33■■□□□ 1.33
LINC01116-202ENST00000339037 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.32
LINC01116-202ENST00000339037 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
LINC01116-202ENST00000339037 MYOM2P54296 1465 aa23.31■■□□□ 1.32
LINC01116-202ENST00000339037 PXDNQ92626 1479 aa23.31■■□□□ 1.32
LINC01116-202ENST00000339037 WAPLQ7Z5K2 1190 aa23.31■■□□□ 1.32
LINC01116-202ENST00000339037 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
LINC01116-202ENST00000339037 TRPC5Q9UL62 973 aaPredicted RBP23.31■■□□□ 1.32
LINC01116-202ENST00000339037 FOXO3O43524 673 aa23.3■■□□□ 1.32
LINC01116-202ENST00000339037 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
LINC01116-202ENST00000339037 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
LINC01116-202ENST00000339037 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
LINC01116-202ENST00000339037 NUTM2FA1L443 756 aa23.28■■□□□ 1.32
LINC01116-202ENST00000339037 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
LINC01116-202ENST00000339037 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
LINC01116-202ENST00000339037 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.31
LINC01116-202ENST00000339037 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
LINC01116-202ENST00000339037 ATRNO75882 1429 aa23.26■■□□□ 1.31
LINC01116-202ENST00000339037 KNDC1Q76NI1 1749 aa23.25■■□□□ 1.31
LINC01116-202ENST00000339037 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
LINC01116-202ENST00000339037 HOXD11P31277 338 aaPredicted RBP23.22■■□□□ 1.31
LINC01116-202ENST00000339037 BCL9LQ86UU0 1499 aa23.22■■□□□ 1.31
LINC01116-202ENST00000339037 FMN2Q9NZ56 1722 aa23.2■■□□□ 1.3
LINC01116-202ENST00000339037 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
LINC01116-202ENST00000339037 C14orf93Q9H972 538 aaKnown RBP23.18■■□□□ 1.3
LINC01116-202ENST00000339037 KIF1AQ12756 1690 aa23.18■■□□□ 1.3
LINC01116-202ENST00000339037 MARF1Q9Y4F3 1742 aaKnown RBP23.17■■□□□ 1.3
LINC01116-202ENST00000339037 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
LINC01116-202ENST00000339037 ZBTB22O15209 634 aa23.17■■□□□ 1.3
LINC01116-202ENST00000339037 SIRT1Q96EB6 747 aa23.17■■□□□ 1.3
LINC01116-202ENST00000339037 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
LINC01116-202ENST00000339037 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
LINC01116-202ENST00000339037 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.3
LINC01116-202ENST00000339037 CFAP70Q5T0N1 1121 aa23.14■■□□□ 1.29
LINC01116-202ENST00000339037 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.29
LINC01116-202ENST00000339037 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
LINC01116-202ENST00000339037 PHF8Q9UPP1 1060 aa23.12■■□□□ 1.29
LINC01116-202ENST00000339037 TNS3Q68CZ2 1445 aa23.11■■□□□ 1.29
LINC01116-202ENST00000339037 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
LINC01116-202ENST00000339037 SLIT2O94813 1529 aa23.11■■□□□ 1.29
LINC01116-202ENST00000339037 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
LINC01116-202ENST00000339037 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
LINC01116-202ENST00000339037 PSME1Q06323 249 aa23.1■■□□□ 1.29
LINC01116-202ENST00000339037 SAFB2Q14151 953 aaKnown RBP eCLIP23.1■■□□□ 1.29
LINC01116-202ENST00000339037 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
LINC01116-202ENST00000339037 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
LINC01116-202ENST00000339037 CCDC125Q86Z20 511 aa23.08■■□□□ 1.29
LINC01116-202ENST00000339037 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
LINC01116-202ENST00000339037 POGKQ9P215 609 aa23.06■■□□□ 1.28
LINC01116-202ENST00000339037 DLC1Q96QB1 1528 aa23.06■■□□□ 1.28
LINC01116-202ENST00000339037 GLI3P10071 1580 aa23.06■■□□□ 1.28
LINC01116-202ENST00000339037 SBNO1A3KN83 1393 aa23.05■■□□□ 1.28
LINC01116-202ENST00000339037 RGPD8O14715 1765 aaPredicted RBP23.05■■□□□ 1.28
LINC01116-202ENST00000339037 ARHGEF10O15013 1369 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 PLEKHG5O94827 1062 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 ZRANB1Q9UGI0 708 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
LINC01116-202ENST00000339037 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
LINC01116-202ENST00000339037 ADGRB2O60241 1585 aa23.01■■□□□ 1.27
LINC01116-202ENST00000339037 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
LINC01116-202ENST00000339037 VPS72Q15906 364 aa23■■□□□ 1.27
LINC01116-202ENST00000339037 TRAK1Q9UPV9 953 aa22.99■■□□□ 1.27
LINC01116-202ENST00000339037 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
LINC01116-202ENST00000339037 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
LINC01116-202ENST00000339037 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
LINC01116-202ENST00000339037 ABCA3Q99758 1704 aa22.97■■□□□ 1.27
LINC01116-202ENST00000339037 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
LINC01116-202ENST00000339037 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
LINC01116-202ENST00000339037 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
LINC01116-202ENST00000339037 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
LINC01116-202ENST00000339037 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
LINC01116-202ENST00000339037 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
LINC01116-202ENST00000339037 DCAF11Q8TEB1 546 aa22.95■■□□□ 1.26
LINC01116-202ENST00000339037 KDM2AQ9Y2K7 1162 aa22.95■■□□□ 1.26
LINC01116-202ENST00000339037 FAM83GA6ND36 823 aa22.94■■□□□ 1.26
LINC01116-202ENST00000339037 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
LINC01116-202ENST00000339037 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms