RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
COMMD4-202ENST00000338995 CCDC144AA2RUR9 1427 aa21.16■□□□□ 0.98
COMMD4-202ENST00000338995 PRAG1Q86YV5 1406 aa21.16■□□□□ 0.98
COMMD4-202ENST00000338995 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
COMMD4-202ENST00000338995 LRPPRCP42704 1394 aaKnown RBP21.15■□□□□ 0.98
COMMD4-202ENST00000338995 ANKRD30BQ9BXX2 1392 aa21.15■□□□□ 0.98
COMMD4-202ENST00000338995 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
COMMD4-202ENST00000338995 FNBP4Q8N3X1 1017 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-202ENST00000338995 FOXO3O43524 673 aa21.12■□□□□ 0.97
COMMD4-202ENST00000338995 WAPLQ7Z5K2 1190 aa21.11■□□□□ 0.97
COMMD4-202ENST00000338995 PPLO60437 1756 aa21.09■□□□□ 0.97
COMMD4-202ENST00000338995 ABCC11Q96J66 1382 aa21.09■□□□□ 0.97
COMMD4-202ENST00000338995 LAMC1P11047 1609 aa21.08■□□□□ 0.97
COMMD4-202ENST00000338995 TMEM132EQ6IEE7 984 aa21.08■□□□□ 0.97
COMMD4-202ENST00000338995 RGS12O14924 1447 aa21.07■□□□□ 0.96
COMMD4-202ENST00000338995 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
COMMD4-202ENST00000338995 SIRT1Q96EB6 747 aa21.07■□□□□ 0.96
COMMD4-202ENST00000338995 ATAD2Q6PL18 1390 aa21.07■□□□□ 0.96
COMMD4-202ENST00000338995 XPCQ01831 940 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-202ENST00000338995 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
COMMD4-202ENST00000338995 PSME1Q06323 249 aa21.03■□□□□ 0.96
COMMD4-202ENST00000338995 C14orf93Q9H972 538 aaKnown RBP21.03■□□□□ 0.96
COMMD4-202ENST00000338995 TECPR2O15040 1411 aa21.03■□□□□ 0.96
COMMD4-202ENST00000338995 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.96
COMMD4-202ENST00000338995 CCDC125Q86Z20 511 aa21.02■□□□□ 0.96
COMMD4-202ENST00000338995 DHX57Q6P158 1386 aaKnown RBP21.01■□□□□ 0.95
COMMD4-202ENST00000338995 HAP1P54257 671 aaPredicted RBP21.01■□□□□ 0.95
COMMD4-202ENST00000338995 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
COMMD4-202ENST00000338995 GJD4Q96KN9 370 aaPredicted RBP21■□□□□ 0.95
COMMD4-202ENST00000338995 ATRNO75882 1429 aa20.99■□□□□ 0.95
COMMD4-202ENST00000338995 YTHDC2Q9H6S0 1430 aaKnown RBP20.99■□□□□ 0.95
COMMD4-202ENST00000338995 MYOM2P54296 1465 aa20.98■□□□□ 0.95
COMMD4-202ENST00000338995 SPATA31A3Q5VYP0 1347 aa20.98■□□□□ 0.95
COMMD4-202ENST00000338995 COL22A1Q8NFW1 1626 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-202ENST00000338995 PIK3C2GO75747 1445 aa20.97■□□□□ 0.95
COMMD4-202ENST00000338995 PXDNQ92626 1479 aa20.97■□□□□ 0.95
COMMD4-202ENST00000338995 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
COMMD4-202ENST00000338995 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
COMMD4-202ENST00000338995 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
COMMD4-202ENST00000338995 CFAP70Q5T0N1 1121 aa20.96■□□□□ 0.95
COMMD4-202ENST00000338995 POGKQ9P215 609 aa20.96■□□□□ 0.95
COMMD4-202ENST00000338995 ZRANB1Q9UGI0 708 aa20.95■□□□□ 0.94
COMMD4-202ENST00000338995 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
COMMD4-202ENST00000338995 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
COMMD4-202ENST00000338995 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
COMMD4-202ENST00000338995 SAFB2Q14151 953 aaKnown RBP eCLIP20.91■□□□□ 0.94
COMMD4-202ENST00000338995 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
COMMD4-202ENST00000338995 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
COMMD4-202ENST00000338995 IFT172Q9UG01 1749 aa20.89■□□□□ 0.93
COMMD4-202ENST00000338995 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
COMMD4-202ENST00000338995 SBNO1A3KN83 1393 aa20.87■□□□□ 0.93
COMMD4-202ENST00000338995 KIF1AQ12756 1690 aa20.87■□□□□ 0.93
COMMD4-202ENST00000338995 SF3B2Q13435 895 aaKnown RBP20.87■□□□□ 0.93
COMMD4-202ENST00000338995 ARHGEF10O15013 1369 aa20.86■□□□□ 0.93
COMMD4-202ENST00000338995 PLEKHG5O94827 1062 aa20.86■□□□□ 0.93
COMMD4-202ENST00000338995 FMN2Q9NZ56 1722 aa20.86■□□□□ 0.93
COMMD4-202ENST00000338995 VPS72Q15906 364 aa20.85■□□□□ 0.93
COMMD4-202ENST00000338995 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
COMMD4-202ENST00000338995 CABLES1Q8TDN4 633 aa20.85■□□□□ 0.93
COMMD4-202ENST00000338995 KDM2AQ9Y2K7 1162 aa20.85■□□□□ 0.93
COMMD4-202ENST00000338995 TNS3Q68CZ2 1445 aa20.85■□□□□ 0.93
COMMD4-202ENST00000338995 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
COMMD4-202ENST00000338995 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
COMMD4-202ENST00000338995 TRAK1Q9UPV9 953 aa20.84■□□□□ 0.93
COMMD4-202ENST00000338995 SLIT2O94813 1529 aa20.83■□□□□ 0.93
COMMD4-202ENST00000338995 SEPT12Q8IYM1 358 aa20.83■□□□□ 0.93
COMMD4-202ENST00000338995 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.92
COMMD4-202ENST00000338995 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.92
COMMD4-202ENST00000338995 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
COMMD4-202ENST00000338995 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
COMMD4-202ENST00000338995 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
COMMD4-202ENST00000338995 RAB3GAP2Q9H2M9 1393 aa20.81■□□□□ 0.92
COMMD4-202ENST00000338995 ONECUT3O60422 494 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-202ENST00000338995 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
COMMD4-202ENST00000338995 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-202ENST00000338995 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
COMMD4-202ENST00000338995 DLC1Q96QB1 1528 aa20.78■□□□□ 0.92
COMMD4-202ENST00000338995 A0A0G2JS52 829 aa20.78■□□□□ 0.92
COMMD4-202ENST00000338995 HRCP23327 699 aa20.78■□□□□ 0.92
COMMD4-202ENST00000338995 MYT1Q01538 1121 aa20.78■□□□□ 0.92
COMMD4-202ENST00000338995 NGDNQ8NEJ9 315 aaKnown RBP20.78■□□□□ 0.92
COMMD4-202ENST00000338995 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.78■□□□□ 0.92
COMMD4-202ENST00000338995 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
COMMD4-202ENST00000338995 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
COMMD4-202ENST00000338995 KRT27Q7Z3Y8 459 aa20.77■□□□□ 0.92
COMMD4-202ENST00000338995 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
COMMD4-202ENST00000338995 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
COMMD4-202ENST00000338995 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-202ENST00000338995 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
COMMD4-202ENST00000338995 GLI3P10071 1580 aa20.72■□□□□ 0.91
COMMD4-202ENST00000338995 DEFB132Q7Z7B7 95 aa20.71■□□□□ 0.91
COMMD4-202ENST00000338995 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
COMMD4-202ENST00000338995 BAG6P46379 1132 aa20.69■□□□□ 0.9
COMMD4-202ENST00000338995 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
COMMD4-202ENST00000338995 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
COMMD4-202ENST00000338995 PRDM11Q9NQV5 511 aa20.68■□□□□ 0.9
COMMD4-202ENST00000338995 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
COMMD4-202ENST00000338995 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
COMMD4-202ENST00000338995 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
COMMD4-202ENST00000338995 EP400Q96L91 3159 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms