RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PRKAR2BP31323 418 aa20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
TRAPPC11-201ENST00000334690 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
TRAPPC11-201ENST00000334690 GOLGA6L19H0YKK7 550 aa20.84■□□□□ 0.93
TRAPPC11-201ENST00000334690 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
TRAPPC11-201ENST00000334690 ERC2O15083 957 aa20.83■□□□□ 0.93
TRAPPC11-201ENST00000334690 BECN2A8MW95 431 aa20.83■□□□□ 0.92
TRAPPC11-201ENST00000334690 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.92
TRAPPC11-201ENST00000334690 GNAI3P08754 354 aa20.83■□□□□ 0.92
TRAPPC11-201ENST00000334690 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.92
TRAPPC11-201ENST00000334690 CDK13Q14004 1512 aaKnown RBP20.82■□□□□ 0.92
TRAPPC11-201ENST00000334690 BCAR3O75815 825 aa20.82■□□□□ 0.92
TRAPPC11-201ENST00000334690 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
TRAPPC11-201ENST00000334690 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
TRAPPC11-201ENST00000334690 FRAT2O75474 233 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC11-201ENST00000334690 RASSF8Q8NHQ8 419 aa20.81■□□□□ 0.92
TRAPPC11-201ENST00000334690 GCC1Q96CN9 775 aa20.81■□□□□ 0.92
TRAPPC11-201ENST00000334690 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
TRAPPC11-201ENST00000334690 UBTFL1P0CB47 393 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC11-201ENST00000334690 NLRP6P59044 892 aa20.8■□□□□ 0.92
TRAPPC11-201ENST00000334690 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
TRAPPC11-201ENST00000334690 TWISTNBQ3B726 338 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC11-201ENST00000334690 TMX4Q9H1E5 349 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC11-201ENST00000334690 SMC3Q9UQE7 1217 aa20.79■□□□□ 0.92
TRAPPC11-201ENST00000334690 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
TRAPPC11-201ENST00000334690 ARID3AQ99856 593 aa20.78■□□□□ 0.92
TRAPPC11-201ENST00000334690 HSP90AA2PQ14568 343 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC11-201ENST00000334690 RAPGEF4Q8WZA2 1011 aa20.77■□□□□ 0.92
TRAPPC11-201ENST00000334690 MRE11P49959 708 aa20.77■□□□□ 0.91
TRAPPC11-201ENST00000334690 MCTP1Q6DN14 999 aa20.77■□□□□ 0.91
TRAPPC11-201ENST00000334690 SYNE3Q6ZMZ3 975 aa20.77■□□□□ 0.91
TRAPPC11-201ENST00000334690 CCDC30Q5VVM6 783 aa20.76■□□□□ 0.91
TRAPPC11-201ENST00000334690 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
TRAPPC11-201ENST00000334690 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 CUL7Q14999 1698 aa20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 ABCC5O15440 1437 aa20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
TRAPPC11-201ENST00000334690 EVA1CP58658 441 aa20.74■□□□□ 0.91
TRAPPC11-201ENST00000334690 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC11-201ENST00000334690 CPLX1O14810 134 aa20.74■□□□□ 0.91
TRAPPC11-201ENST00000334690 VPS37CA5D8V6 355 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 MCM2P49736 904 aa20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 PTPN23Q9H3S7 1636 aa20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 RABEP1Q15276 862 aa20.73■□□□□ 0.91
TRAPPC11-201ENST00000334690 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 TPM3P06753 285 aa20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 SLFN5Q08AF3 891 aa20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 CABP1Q9NZU7 370 aa20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 BICD2Q8TD16 824 aa20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 MAGI1Q96QZ7 1491 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC11-201ENST00000334690 TRDNQ13061 729 aa20.71■□□□□ 0.91
TRAPPC11-201ENST00000334690 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
TRAPPC11-201ENST00000334690 TRAK2O60296 914 aa20.71■□□□□ 0.91
TRAPPC11-201ENST00000334690 TRIM29Q14134 588 aa20.7■□□□□ 0.9
TRAPPC11-201ENST00000334690 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
TRAPPC11-201ENST00000334690 RIC3Q7Z5B4 369 aa20.7■□□□□ 0.9
TRAPPC11-201ENST00000334690 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
TRAPPC11-201ENST00000334690 CLSTN1O94985 981 aa20.69■□□□□ 0.9
TRAPPC11-201ENST00000334690 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
TRAPPC11-201ENST00000334690 CAMSAP2Q08AD1 1489 aa20.69■□□□□ 0.9
TRAPPC11-201ENST00000334690 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
TRAPPC11-201ENST00000334690 WWC1Q8IX03 1113 aa20.68■□□□□ 0.9
TRAPPC11-201ENST00000334690 MBD3O95983 291 aa20.68■□□□□ 0.9
TRAPPC11-201ENST00000334690 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
TRAPPC11-201ENST00000334690 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC11-201ENST00000334690 GNAI2P04899 355 aa20.68■□□□□ 0.9
TRAPPC11-201ENST00000334690 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 FCHSD2O94868 740 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 CREBRFQ8IUR6 639 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 NEK4P51957 841 aa20.67■□□□□ 0.9
TRAPPC11-201ENST00000334690 APPP05067 770 aa20.66■□□□□ 0.9
TRAPPC11-201ENST00000334690 TPD52L1Q16890 204 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC11-201ENST00000334690 NLRP2Q9NX02 1062 aa20.66■□□□□ 0.9
TRAPPC11-201ENST00000334690 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC11-201ENST00000334690 ABTB2Q8N961 1025 aa20.66■□□□□ 0.9
TRAPPC11-201ENST00000334690 PSMA5P28066 241 aa20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 CCT4P50991 539 aaKnown RBP20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 TPM1P09493 284 aa20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 GPRASP1Q5JY77 1395 aa20.65■□□□□ 0.9
TRAPPC11-201ENST00000334690 TSR1Q2NL82 804 aaKnown RBP20.64■□□□□ 0.9
TRAPPC11-201ENST00000334690 SLC4A2P04920 1241 aa20.64■□□□□ 0.89
TRAPPC11-201ENST00000334690 GOLGA6L1Q8N7Z2 621 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms