RNA–Protein interactions for RNA: ENST00000330912.6

TREX2-201, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TREX2, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-201ENST00000330912 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
TREX2-201ENST00000330912 LTKP29376 864 aa24.27■■□□□ 1.48
TREX2-201ENST00000330912 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
TREX2-201ENST00000330912 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
TREX2-201ENST00000330912 BCANQ96GW7 911 aa24.26■■□□□ 1.47
TREX2-201ENST00000330912 NPC1L1Q9UHC9 1359 aa24.25■■□□□ 1.47
TREX2-201ENST00000330912 PPP2R1AP30153 589 aa24.25■■□□□ 1.47
TREX2-201ENST00000330912 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
TREX2-201ENST00000330912 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
TREX2-201ENST00000330912 NSD3Q9BZ95 1437 aa24.23■■□□□ 1.47
TREX2-201ENST00000330912 PUS7Q96PZ0 661 aaKnown RBP24.23■■□□□ 1.47
TREX2-201ENST00000330912 ABCC11Q96J66 1382 aa24.21■■□□□ 1.47
TREX2-201ENST00000330912 DLC1Q96QB1 1528 aa24.21■■□□□ 1.47
TREX2-201ENST00000330912 TXNDC2Q86VQ3 553 aa24.2■■□□□ 1.46
TREX2-201ENST00000330912 FKBP8Q14318 412 aa24.19■■□□□ 1.46
TREX2-201ENST00000330912 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
TREX2-201ENST00000330912 RIMS1Q86UR5 1692 aaKnown RBP24.18■■□□□ 1.46
TREX2-201ENST00000330912 CDK19Q9BWU1 502 aa24.18■■□□□ 1.46
TREX2-201ENST00000330912 ANKRD36BQ8N2N9 1353 aa24.17■■□□□ 1.46
TREX2-201ENST00000330912 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
TREX2-201ENST00000330912 SLC26A8Q96RN1 970 aa24.14■■□□□ 1.46
TREX2-201ENST00000330912 EID1Q9Y6B2 187 aa24.14■■□□□ 1.45
TREX2-201ENST00000330912 SLIT1O75093 1534 aa24.14■■□□□ 1.45
TREX2-201ENST00000330912 A0A1W2PP64 1363 aa24.13■■□□□ 1.45
TREX2-201ENST00000330912 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
TREX2-201ENST00000330912 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
TREX2-201ENST00000330912 THEMISQ8N1K5 641 aaPredicted RBP24.12■■□□□ 1.45
TREX2-201ENST00000330912 TECPR2O15040 1411 aa24.1■■□□□ 1.45
TREX2-201ENST00000330912 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
TREX2-201ENST00000330912 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
TREX2-201ENST00000330912 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
TREX2-201ENST00000330912 NEFLP07196 543 aa24.1■■□□□ 1.45
TREX2-201ENST00000330912 ADAMTS8Q9UP79 889 aa24.1■■□□□ 1.45
TREX2-201ENST00000330912 SALL2Q9Y467 1007 aaPredicted RBP24.1■■□□□ 1.45
TREX2-201ENST00000330912 RBM19Q9Y4C8 960 aaKnown RBP24.1■■□□□ 1.45
TREX2-201ENST00000330912 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 CD163L1Q9NR16 1453 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 USP32Q8NFA0 1604 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 MORC1Q86VD1 984 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 ROBO2Q9HCK4 1378 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 ADAMTSL3P82987 1691 aa24.09■■□□□ 1.45
TREX2-201ENST00000330912 MED14O60244 1454 aa24.08■■□□□ 1.44
TREX2-201ENST00000330912 CPS1P31327 1500 aa24.07■■□□□ 1.44
TREX2-201ENST00000330912 FAM135BQ49AJ0 1406 aa24.07■■□□□ 1.44
TREX2-201ENST00000330912 CEP170BQ9Y4F5 1589 aaPredicted RBP24.07■■□□□ 1.44
TREX2-201ENST00000330912 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
TREX2-201ENST00000330912 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
TREX2-201ENST00000330912 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
TREX2-201ENST00000330912 SIRT1Q96EB6 747 aa24.04■■□□□ 1.44
TREX2-201ENST00000330912 WDR43Q15061 677 aaKnown RBP eCLIP24.04■■□□□ 1.44
TREX2-201ENST00000330912 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
TREX2-201ENST00000330912 NCKAP5LQ9HCH0 1330 aa24.01■■□□□ 1.43
TREX2-201ENST00000330912 INSRP06213 1382 aa24■■□□□ 1.43
TREX2-201ENST00000330912 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
TREX2-201ENST00000330912 SMG6Q86US8 1419 aaKnown RBP23.99■■□□□ 1.43
TREX2-201ENST00000330912 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
TREX2-201ENST00000330912 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
TREX2-201ENST00000330912 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
TREX2-201ENST00000330912 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
TREX2-201ENST00000330912 NSD2O96028 1365 aa23.98■■□□□ 1.43
TREX2-201ENST00000330912 NUDCQ9Y266 331 aa23.98■■□□□ 1.43
TREX2-201ENST00000330912 FYB1O15117 783 aa23.98■■□□□ 1.43
TREX2-201ENST00000330912 IRX6P78412 446 aaPredicted RBP23.97■■□□□ 1.43
TREX2-201ENST00000330912 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
TREX2-201ENST00000330912 PPIP5K1Q6PFW1 1433 aa23.96■■□□□ 1.43
TREX2-201ENST00000330912 POLR3AO14802 1390 aaPredicted RBP23.96■■□□□ 1.43
TREX2-201ENST00000330912 MTHFSP49914 203 aa23.95■■□□□ 1.43
TREX2-201ENST00000330912 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
TREX2-201ENST00000330912 PRR36Q9H6K5 1346 aa23.94■■□□□ 1.42
TREX2-201ENST00000330912 ATP7BP35670 1465 aa23.94■■□□□ 1.42
TREX2-201ENST00000330912 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
TREX2-201ENST00000330912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.93■■□□□ 1.42
TREX2-201ENST00000330912 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
TREX2-201ENST00000330912 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
TREX2-201ENST00000330912 CDCA7LQ96GN5 454 aa23.91■■□□□ 1.42
TREX2-201ENST00000330912 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
TREX2-201ENST00000330912 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
TREX2-201ENST00000330912 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
TREX2-201ENST00000330912 SHPRHQ149N8 1683 aa23.9■■□□□ 1.42
TREX2-201ENST00000330912 ANKLE2Q86XL3 938 aa23.89■■□□□ 1.42
TREX2-201ENST00000330912 ADGRB2O60241 1585 aa23.89■■□□□ 1.42
TREX2-201ENST00000330912 ANKRD26Q9UPS8 1709 aa23.89■■□□□ 1.41
TREX2-201ENST00000330912 PTCH1Q13635 1447 aa23.88■■□□□ 1.41
TREX2-201ENST00000330912 KIF20BQ96Q89 1820 aa23.88■■□□□ 1.41
TREX2-201ENST00000330912 KCNA6P17658 529 aa23.87■■□□□ 1.41
TREX2-201ENST00000330912 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
TREX2-201ENST00000330912 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
TREX2-201ENST00000330912 APAF1O14727 1248 aa23.84■■□□□ 1.41
TREX2-201ENST00000330912 FBLN1P23142 703 aa23.84■■□□□ 1.41
TREX2-201ENST00000330912 PDE3BQ13370 1112 aa23.84■■□□□ 1.41
TREX2-201ENST00000330912 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.41
TREX2-201ENST00000330912 FANCIQ9NVI1 1328 aa23.83■■□□□ 1.4
TREX2-201ENST00000330912 NME9Q86XW9 330 aa23.82■■□□□ 1.4
TREX2-201ENST00000330912 CFAP53Q96M91 514 aa23.82■■□□□ 1.4
TREX2-201ENST00000330912 ZRANB1Q9UGI0 708 aa23.82■■□□□ 1.4
TREX2-201ENST00000330912 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
TREX2-201ENST00000330912 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
TREX2-201ENST00000330912 MSH5O43196 834 aa23.8■■□□□ 1.4
TREX2-201ENST00000330912 ITSN1Q15811 1721 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms