RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 PRDM4Q9UKN5 801 aa6.9□□□□□ -1.3
PDE4B-201ENST00000329654 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDE4B-201ENST00000329654 ZFYVE9O95405 1425 aa6.9□□□□□ -1.3
PDE4B-201ENST00000329654 SETBP1Q9Y6X0 1596 aa6.9□□□□□ -1.3
PDE4B-201ENST00000329654 C3P01024 1663 aa6.9□□□□□ -1.31
PDE4B-201ENST00000329654 POLR3GLQ9BT43 218 aa6.9□□□□□ -1.31
PDE4B-201ENST00000329654 RPGRIP1LQ68CZ1 1315 aa6.9□□□□□ -1.31
PDE4B-201ENST00000329654 ADAMTSL3P82987 1691 aa6.89□□□□□ -1.31
PDE4B-201ENST00000329654 NCLP19338 710 aaKnown RBP6.89□□□□□ -1.31
PDE4B-201ENST00000329654 TOM1O60784 492 aa6.89□□□□□ -1.31
PDE4B-201ENST00000329654 ILDR1Q86SU0 546 aaPredicted RBP6.89□□□□□ -1.31
PDE4B-201ENST00000329654 SLC52A1Q9NWF4 448 aa6.89□□□□□ -1.31
PDE4B-201ENST00000329654 SETD1BQ9UPS6 1966 aaKnown RBP6.89□□□□□ -1.31
PDE4B-201ENST00000329654 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
PDE4B-201ENST00000329654 MYO3AQ8NEV4 1616 aa6.88□□□□□ -1.31
PDE4B-201ENST00000329654 CALD1Q05682 793 aaKnown RBP6.88□□□□□ -1.31
PDE4B-201ENST00000329654 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
PDE4B-201ENST00000329654 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
PDE4B-201ENST00000329654 CCDC9Q9Y3X0 531 aaKnown RBP6.88□□□□□ -1.31
PDE4B-201ENST00000329654 UBAP1LF5GYI3 381 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 HMGB1P09429 215 aaKnown RBP6.87□□□□□ -1.31
PDE4B-201ENST00000329654 CNPY4Q8N129 248 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.87□□□□□ -1.31
PDE4B-201ENST00000329654 RIMS1Q86UR5 1692 aaKnown RBP6.87□□□□□ -1.31
PDE4B-201ENST00000329654 UBR1Q8IWV7 1749 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 IGSF3O75054 1194 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 PIK3C2GO75747 1445 aa6.87□□□□□ -1.31
PDE4B-201ENST00000329654 PIAS4Q8N2W9 510 aaPredicted RBP6.87□□□□□ -1.31
PDE4B-201ENST00000329654 SETD1AO15047 1707 aaKnown RBP6.86□□□□□ -1.31
PDE4B-201ENST00000329654 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE4B-201ENST00000329654 TICAM2Q86XR7 235 aa6.86□□□□□ -1.31
PDE4B-201ENST00000329654 ADGRB1O14514 1584 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 PPP4R3CPQ6ZMV5 832 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 A2ML1A8K2U0 1454 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 NCKAP5LQ9HCH0 1330 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
PDE4B-201ENST00000329654 NBR1Q14596 966 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 FBXO31Q5XUX0 539 aaPredicted RBP6.85□□□□□ -1.31
PDE4B-201ENST00000329654 NLRP1Q9C000 1473 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 ZBTB22O15209 634 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 USP47Q96K76 1375 aa6.85□□□□□ -1.31
PDE4B-201ENST00000329654 ZNF142P52746 1687 aaPredicted RBP6.85□□□□□ -1.31
PDE4B-201ENST00000329654 IDI1Q13907 227 aa6.84□□□□□ -1.31
PDE4B-201ENST00000329654 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
PDE4B-201ENST00000329654 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.84□□□□□ -1.31
PDE4B-201ENST00000329654 FAM9BQ8IZU0 186 aa6.84□□□□□ -1.31
PDE4B-201ENST00000329654 ROCK2O75116 1388 aaKnown RBP6.84□□□□□ -1.31
PDE4B-201ENST00000329654 CCER2I3L3R5 266 aa6.84□□□□□ -1.32
PDE4B-201ENST00000329654 RGL3Q3MIN7 710 aa6.84□□□□□ -1.32
PDE4B-201ENST00000329654 SCAF11Q99590 1463 aaKnown RBP6.83□□□□□ -1.32
PDE4B-201ENST00000329654 WASHC2AQ641Q2 1341 aa6.83□□□□□ -1.32
PDE4B-201ENST00000329654 NRXN3Q9Y4C0 1643 aa6.83□□□□□ -1.32
PDE4B-201ENST00000329654 LMTK3Q96Q04 1460 aa6.83□□□□□ -1.32
PDE4B-201ENST00000329654 NOP58Q9Y2X3 529 aaKnown RBP6.83□□□□□ -1.32
PDE4B-201ENST00000329654 CENPJQ9HC77 1338 aaPredicted RBP6.83□□□□□ -1.32
PDE4B-201ENST00000329654 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
PDE4B-201ENST00000329654 KDM2AQ9Y2K7 1162 aa6.83□□□□□ -1.32
PDE4B-201ENST00000329654 ARHGEF28Q8N1W1 1705 aaKnown RBP6.82□□□□□ -1.32
PDE4B-201ENST00000329654 SLIT1O75093 1534 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 ADGRF5Q8IZF2 1346 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 ARHGAP23Q9P227 1491 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 ASXL1Q8IXJ9 1541 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 C14orf93Q9H972 538 aaKnown RBP6.82□□□□□ -1.32
PDE4B-201ENST00000329654 KCNG1Q9UIX4 513 aa6.82□□□□□ -1.32
PDE4B-201ENST00000329654 KNDC1Q76NI1 1749 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
PDE4B-201ENST00000329654 CARD11Q9BXL7 1154 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 NBPF1Q3BBV0 1214 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 PRDM10Q9NQV6 1147 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 ALKQ9UM73 1620 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 VGFO15240 615 aaPredicted RBP6.81□□□□□ -1.32
PDE4B-201ENST00000329654 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
PDE4B-201ENST00000329654 RGS3P49796 1198 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 SBNO2Q9Y2G9 1366 aa6.81□□□□□ -1.32
PDE4B-201ENST00000329654 WWC1Q8IX03 1113 aa6.8□□□□□ -1.32
PDE4B-201ENST00000329654 SENP3-EIF4A1A0A087X0R7 540 aa6.8□□□□□ -1.32
PDE4B-201ENST00000329654 RIMS2Q9UQ26 1411 aa6.8□□□□□ -1.32
PDE4B-201ENST00000329654 DLC1Q96QB1 1528 aa6.8□□□□□ -1.32
PDE4B-201ENST00000329654 QRICH2Q9H0J4 1663 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 HSP90AA1P07900 732 aaKnown RBP6.79□□□□□ -1.32
PDE4B-201ENST00000329654 PLCB2Q00722 1185 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 MRS2Q9HD23 443 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 CLSTN1O94985 981 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 TESK2Q96S53 571 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 CEP170BQ9Y4F5 1589 aaPredicted RBP6.79□□□□□ -1.32
PDE4B-201ENST00000329654 EIF3AQ14152 1382 aaKnown RBP6.79□□□□□ -1.32
PDE4B-201ENST00000329654 KIF7Q2M1P5 1343 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 MYOM1P52179 1685 aa6.79□□□□□ -1.32
PDE4B-201ENST00000329654 GRIPAP1Q4V328 841 aa6.78□□□□□ -1.32
PDE4B-201ENST00000329654 DIP2AQ14689 1571 aa6.78□□□□□ -1.32
PDE4B-201ENST00000329654 MED14O60244 1454 aa6.78□□□□□ -1.32
PDE4B-201ENST00000329654 NPHP4O75161 1426 aaPredicted RBP6.78□□□□□ -1.32
PDE4B-201ENST00000329654 TMEM2Q9UHN6 1383 aa6.78□□□□□ -1.32
PDE4B-201ENST00000329654 ATF3P18847 181 aa6.78□□□□□ -1.32
PDE4B-201ENST00000329654 PUS7Q96PZ0 661 aaKnown RBP6.78□□□□□ -1.32
PDE4B-201ENST00000329654 ARID3AQ99856 593 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms