RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
SSH1-201ENST00000326470 FANCAO15360 1455 aa21.37■■□□□ 1.01
SSH1-201ENST00000326470 KANK1Q14678 1352 aa21.37■■□□□ 1.01
SSH1-201ENST00000326470 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
SSH1-201ENST00000326470 RSPH6AQ9H0K4 717 aa21.37■■□□□ 1.01
SSH1-201ENST00000326470 VWDEQ8N2E2 1590 aa21.37■■□□□ 1.01
SSH1-201ENST00000326470 SHPRHQ149N8 1683 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 RLBP1P12271 317 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 L1TD1Q5T7N2 865 aaKnown RBP21.36■■□□□ 1.01
SSH1-201ENST00000326470 AFAP1Q8N556 730 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 IQSEC2Q5JU85 1478 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
SSH1-201ENST00000326470 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
SSH1-201ENST00000326470 TCP11L2Q8N4U5 519 aa21.35■■□□□ 1.01
SSH1-201ENST00000326470 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
SSH1-201ENST00000326470 NEUROD2Q15784 382 aa21.34■■□□□ 1.01
SSH1-201ENST00000326470 MORC1Q86VD1 984 aa21.34■■□□□ 1.01
SSH1-201ENST00000326470 RWDD1Q9H446 243 aaPredicted RBP21.34■■□□□ 1.01
SSH1-201ENST00000326470 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
SSH1-201ENST00000326470 TNNQ9UQP3 1299 aa21.33■■□□□ 1
SSH1-201ENST00000326470 CCDC27Q2M243 656 aa21.32■■□□□ 1
SSH1-201ENST00000326470 NSD3Q9BZ95 1437 aa21.32■■□□□ 1
SSH1-201ENST00000326470 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
SSH1-201ENST00000326470 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
SSH1-201ENST00000326470 ADGRL1O94910 1474 aa21.29■■□□□ 1
SSH1-201ENST00000326470 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
SSH1-201ENST00000326470 UGGT1Q9NYU2 1555 aa21.29■■□□□ 1
SSH1-201ENST00000326470 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
SSH1-201ENST00000326470 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
SSH1-201ENST00000326470 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
SSH1-201ENST00000326470 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
SSH1-201ENST00000326470 IFT172Q9UG01 1749 aa21.27■■□□□ 1
SSH1-201ENST00000326470 KIF3BO15066 747 aa21.27■■□□□ 1
SSH1-201ENST00000326470 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
SSH1-201ENST00000326470 MVPQ14764 893 aaKnown RBP21.26■□□□□ 0.99
SSH1-201ENST00000326470 MYH16Q9H6N6 1097 aa21.26■□□□□ 0.99
SSH1-201ENST00000326470 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
SSH1-201ENST00000326470 KIF1BO60333 1816 aa21.26■□□□□ 0.99
SSH1-201ENST00000326470 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
SSH1-201ENST00000326470 CFAP74Q9C0B2 1584 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 INO80Q9ULG1 1556 aaPredicted RBP21.24■□□□□ 0.99
SSH1-201ENST00000326470 SETBP1Q9Y6X0 1596 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 MTHFSP49914 203 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 SLC12A5Q9H2X9 1139 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 RRAGDQ9NQL2 400 aaPredicted RBP21.24■□□□□ 0.99
SSH1-201ENST00000326470 MCM4P33991 863 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 UBE2Q2Q8WVN8 375 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 CFAP53Q96M91 514 aa21.24■□□□□ 0.99
SSH1-201ENST00000326470 FSD2A1L4K1 749 aa21.23■□□□□ 0.99
SSH1-201ENST00000326470 CD109Q6YHK3 1445 aa21.23■□□□□ 0.99
SSH1-201ENST00000326470 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
SSH1-201ENST00000326470 MROH1Q8NDA8 1641 aa21.22■□□□□ 0.99
SSH1-201ENST00000326470 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
SSH1-201ENST00000326470 GOLGA6L3A6NEY3 463 aa21.21■□□□□ 0.99
SSH1-201ENST00000326470 DZIP1LQ8IYY4 767 aaKnown RBP21.21■□□□□ 0.99
SSH1-201ENST00000326470 C22orf23Q9BZE7 217 aa21.21■□□□□ 0.99
SSH1-201ENST00000326470 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.99
SSH1-201ENST00000326470 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.99
SSH1-201ENST00000326470 CHMP5Q9NZZ3 219 aa21.2■□□□□ 0.99
SSH1-201ENST00000326470 EFCAB6Q5THR3 1501 aa21.2■□□□□ 0.98
SSH1-201ENST00000326470 MROH2AA6NES4 1674 aa21.2■□□□□ 0.98
SSH1-201ENST00000326470 FTSJ3Q8IY81 847 aaKnown RBP21.19■□□□□ 0.98
SSH1-201ENST00000326470 NOS1P29475 1434 aa21.19■□□□□ 0.98
SSH1-201ENST00000326470 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
SSH1-201ENST00000326470 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
SSH1-201ENST00000326470 HDAC1Q13547 482 aaPredicted RBP21.18■□□□□ 0.98
SSH1-201ENST00000326470 SPRYD3Q8NCJ5 442 aa21.18■□□□□ 0.98
SSH1-201ENST00000326470 C14orf93Q9H972 538 aaKnown RBP21.16■□□□□ 0.98
SSH1-201ENST00000326470 ADGRB3O60242 1522 aa21.16■□□□□ 0.98
SSH1-201ENST00000326470 QRICH2Q9H0J4 1663 aa21.16■□□□□ 0.98
SSH1-201ENST00000326470 ADGRB2O60241 1585 aa21.16■□□□□ 0.98
SSH1-201ENST00000326470 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
SSH1-201ENST00000326470 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
SSH1-201ENST00000326470 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.98
SSH1-201ENST00000326470 TRAK2O60296 914 aa21.14■□□□□ 0.97
SSH1-201ENST00000326470 NSD2O96028 1365 aa21.14■□□□□ 0.97
SSH1-201ENST00000326470 ADGRB1O14514 1584 aa21.13■□□□□ 0.97
SSH1-201ENST00000326470 PPRC1Q5VV67 1664 aaKnown RBP21.13■□□□□ 0.97
SSH1-201ENST00000326470 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
SSH1-201ENST00000326470 GZF1Q9H116 711 aaPredicted RBP21.13■□□□□ 0.97
SSH1-201ENST00000326470 SMC4Q9NTJ3 1288 aa21.13■□□□□ 0.97
SSH1-201ENST00000326470 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
SSH1-201ENST00000326470 TRIM27P14373 513 aa21.12■□□□□ 0.97
SSH1-201ENST00000326470 SMC5Q8IY18 1101 aa21.12■□□□□ 0.97
SSH1-201ENST00000326470 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
SSH1-201ENST00000326470 NEO1Q92859 1461 aa21.11■□□□□ 0.97
SSH1-201ENST00000326470 TSR2Q969E8 191 aaKnown RBP21.11■□□□□ 0.97
SSH1-201ENST00000326470 ARXQ96QS3 562 aa21.11■□□□□ 0.97
SSH1-201ENST00000326470 HSCBQ8IWL3 235 aa21.1■□□□□ 0.97
SSH1-201ENST00000326470 POGZQ7Z3K3 1410 aa21.1■□□□□ 0.97
SSH1-201ENST00000326470 ANKRD36BQ8N2N9 1353 aa21.1■□□□□ 0.97
SSH1-201ENST00000326470 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
SSH1-201ENST00000326470 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
SSH1-201ENST00000326470 PANK2Q9BZ23 570 aa21.1■□□□□ 0.97
SSH1-201ENST00000326470 ATF7IPQ6VMQ6 1270 aa21.09■□□□□ 0.97
SSH1-201ENST00000326470 DDX11L8A8MPP1 907 aa21.09■□□□□ 0.97
SSH1-201ENST00000326470 CHGAP10645 457 aaKnown RBP21.09■□□□□ 0.97
SSH1-201ENST00000326470 MRE11P49959 708 aa21.09■□□□□ 0.97
SSH1-201ENST00000326470 ITPRIPQ8IWB1 547 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms