RNA–Protein interactions for RNA: ENST00000324941.4

VPS37D-201, Transcript of VPS37D, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37D, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-201ENST00000324941 KNDC1Q76NI1 1749 aa38.07■■■■□ 3.69
VPS37D-201ENST00000324941 FAM135BQ49AJ0 1406 aa38.07■■■■□ 3.69
VPS37D-201ENST00000324941 DIP2AQ14689 1571 aa38.06■■■■□ 3.68
VPS37D-201ENST00000324941 CENPBP07199 599 aaPredicted RBP38.03■■■■□ 3.68
VPS37D-201ENST00000324941 SRPK2P78362 688 aaKnown RBP38.03■■■■□ 3.68
VPS37D-201ENST00000324941 TMC1Q8TDI8 760 aa38.03■■■■□ 3.68
VPS37D-201ENST00000324941 CABP2Q9NPB3 220 aa38.02■■■■□ 3.68
VPS37D-201ENST00000324941 PLEKHH1Q9ULM0 1364 aa38.02■■■■□ 3.68
VPS37D-201ENST00000324941 CPS1P31327 1500 aa38.02■■■■□ 3.68
VPS37D-201ENST00000324941 CDK19Q9BWU1 502 aa37.98■■■■□ 3.67
VPS37D-201ENST00000324941 SLC12A5Q9H2X9 1139 aa37.97■■■■□ 3.67
VPS37D-201ENST00000324941 MRS2Q9HD23 443 aa37.97■■■■□ 3.67
VPS37D-201ENST00000324941 ATAD2Q6PL18 1390 aa37.96■■■■□ 3.67
VPS37D-201ENST00000324941 CC2D1BQ5T0F9 858 aaKnown RBP37.96■■■■□ 3.67
VPS37D-201ENST00000324941 PARD3Q8TEW0 1356 aa37.95■■■■□ 3.67
VPS37D-201ENST00000324941 AMOTL2Q9Y2J4 779 aa37.94■■■■□ 3.66
VPS37D-201ENST00000324941 NINLQ9Y2I6 1382 aa37.94■■■■□ 3.66
VPS37D-201ENST00000324941 MYBBP1AQ9BQG0 1328 aaKnown RBP37.94■■■■□ 3.66
VPS37D-201ENST00000324941 PTPRUQ92729 1446 aa37.94■■■■□ 3.66
VPS37D-201ENST00000324941 ROBO2Q9HCK4 1378 aa37.93■■■■□ 3.66
VPS37D-201ENST00000324941 CCDC184Q52MB2 194 aa37.92■■■■□ 3.66
VPS37D-201ENST00000324941 PIK3R4Q99570 1358 aa37.92■■■■□ 3.66
VPS37D-201ENST00000324941 AMER1Q5JTC6 1135 aaPredicted RBP37.9■■■■□ 3.66
VPS37D-201ENST00000324941 NPC1L1Q9UHC9 1359 aa37.9■■■■□ 3.66
VPS37D-201ENST00000324941 CARD14Q9BXL6 1004 aa37.89■■■■□ 3.66
VPS37D-201ENST00000324941 WASLO00401 505 aaPredicted RBP37.87■■■■□ 3.65
VPS37D-201ENST00000324941 ANKRD36BQ8N2N9 1353 aa37.85■■■■□ 3.65
VPS37D-201ENST00000324941 KDM4FA0A1W2PPD8 638 aa37.83■■■■□ 3.65
VPS37D-201ENST00000324941 PTCH1Q13635 1447 aa37.83■■■■□ 3.65
VPS37D-201ENST00000324941 NPHP4O75161 1426 aaPredicted RBP37.83■■■■□ 3.65
VPS37D-201ENST00000324941 BRD4O60885 1362 aaPredicted RBP37.82■■■■□ 3.64
VPS37D-201ENST00000324941 NLRP13Q86W25 1043 aa37.81■■■■□ 3.64
VPS37D-201ENST00000324941 NSD3Q9BZ95 1437 aa37.8■■■■□ 3.64
VPS37D-201ENST00000324941 TERF2IPQ9NYB0 399 aa37.79■■■■□ 3.64
VPS37D-201ENST00000324941 NCKAP5LQ9HCH0 1330 aa37.77■■■■□ 3.64
VPS37D-201ENST00000324941 XRN1Q8IZH2 1706 aaKnown RBP37.77■■■■□ 3.64
VPS37D-201ENST00000324941 HDGFL2Q7Z4V5 671 aaPredicted RBP37.74■■■■□ 3.63
VPS37D-201ENST00000324941 FAM9BQ8IZU0 186 aa37.74■■■■□ 3.63
VPS37D-201ENST00000324941 CABP1Q9NZU7 370 aa37.74■■■■□ 3.63
VPS37D-201ENST00000324941 ADGRB2O60241 1585 aa37.74■■■■□ 3.63
VPS37D-201ENST00000324941 KCNA6P17658 529 aa37.73■■■■□ 3.63
VPS37D-201ENST00000324941 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.72■■■■□ 3.63
VPS37D-201ENST00000324941 CGNL1Q0VF96 1302 aa37.71■■■■□ 3.63
VPS37D-201ENST00000324941 A0A1W2PP64 1363 aa37.71■■■■□ 3.63
VPS37D-201ENST00000324941 NUDT16Q96DE0 195 aaKnown RBP37.71■■■■□ 3.63
VPS37D-201ENST00000324941 USP32Q8NFA0 1604 aa37.69■■■■□ 3.62
VPS37D-201ENST00000324941 CCDC61Q9Y6R9 512 aa37.68■■■■□ 3.62
VPS37D-201ENST00000324941 CHD2O14647 1828 aaKnown RBP37.67■■■■□ 3.62
VPS37D-201ENST00000324941 PPP2R1AP30153 589 aa37.66■■■■□ 3.62
VPS37D-201ENST00000324941 ATP7BP35670 1465 aa37.65■■■■□ 3.62
VPS37D-201ENST00000324941 CD163L1Q9NR16 1453 aa37.65■■■■□ 3.62
VPS37D-201ENST00000324941 PNISRQ8TF01 805 aaKnown RBP37.65■■■■□ 3.62
VPS37D-201ENST00000324941 PPIP5K1Q6PFW1 1433 aa37.64■■■■□ 3.62
VPS37D-201ENST00000324941 NSD2O96028 1365 aa37.63■■■■□ 3.61
VPS37D-201ENST00000324941 MORC1Q86VD1 984 aa37.61■■■■□ 3.61
VPS37D-201ENST00000324941 HNRNPUQ00839 825 aaKnown RBP eCLIP37.58■■■■□ 3.61
VPS37D-201ENST00000324941 PRR36Q9H6K5 1346 aa37.57■■■■□ 3.6
VPS37D-201ENST00000324941 HSPA2P54652 639 aa37.54■■■■□ 3.6
VPS37D-201ENST00000324941 CPSF1Q10570 1443 aaKnown RBP37.53■■■■□ 3.6
VPS37D-201ENST00000324941 ZNF692Q9BU19 519 aaPredicted RBP37.51■■■■□ 3.6
VPS37D-201ENST00000324941 CDC42BPGQ6DT37 1551 aa37.5■■■■□ 3.59
VPS37D-201ENST00000324941 NUTM2FA1L443 756 aa37.49■■■■□ 3.59
VPS37D-201ENST00000324941 LMTK3Q96Q04 1460 aa37.49■■■■□ 3.59
VPS37D-201ENST00000324941 PLEKHG3A1L390 1219 aa37.48■■■■□ 3.59
VPS37D-201ENST00000324941 NWD1Q149M9 1564 aa37.47■■■■□ 3.59
VPS37D-201ENST00000324941 FYB1O15117 783 aa37.47■■■■□ 3.59
VPS37D-201ENST00000324941 EDC4Q6P2E9 1401 aaKnown RBP37.45■■■■□ 3.59
VPS37D-201ENST00000324941 TOPAZ1Q8N9V7 1692 aa37.44■■■■□ 3.58
VPS37D-201ENST00000324941 GGNBP2Q9H3C7 697 aa37.43■■■■□ 3.58
VPS37D-201ENST00000324941 ANKARQ7Z5J8 1434 aa37.42■■■■□ 3.58
VPS37D-201ENST00000324941 TNNT2P45379 298 aaPredicted RBP37.42■■■■□ 3.58
VPS37D-201ENST00000324941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.41■■■■□ 3.58
VPS37D-201ENST00000324941 ACEP12821 1306 aa37.4■■■■□ 3.58
VPS37D-201ENST00000324941 ITSN1Q15811 1721 aa37.39■■■■□ 3.58
VPS37D-201ENST00000324941 ADGRL3Q9HAR2 1447 aa37.39■■■■□ 3.58
VPS37D-201ENST00000324941 PROSER2Q86WR7 435 aaPredicted RBP37.39■■■■□ 3.58
VPS37D-201ENST00000324941 AKAP12Q02952 1782 aa37.38■■■■□ 3.57
VPS37D-201ENST00000324941 C14orf37Q86TY3 774 aa37.37■■■■□ 3.57
VPS37D-201ENST00000324941 RBM33Q96EV2 1170 aaKnown RBP37.37■■■■□ 3.57
VPS37D-201ENST00000324941 NALCNQ8IZF0 1738 aa37.37■■■■□ 3.57
VPS37D-201ENST00000324941 NKTRP30414 1462 aaKnown RBP37.36■■■■□ 3.57
VPS37D-201ENST00000324941 MON2Q7Z3U7 1717 aa37.36■■■■□ 3.57
VPS37D-201ENST00000324941 FMN2Q9NZ56 1722 aa37.36■■■■□ 3.57
VPS37D-201ENST00000324941 KIF20BQ96Q89 1820 aa37.36■■■■□ 3.57
VPS37D-201ENST00000324941 WDR43Q15061 677 aaKnown RBP eCLIP37.36■■■■□ 3.57
VPS37D-201ENST00000324941 ANKRD26Q9UPS8 1709 aa37.35■■■■□ 3.57
VPS37D-201ENST00000324941 INSRP06213 1382 aa37.35■■■■□ 3.57
VPS37D-201ENST00000324941 POLR3AO14802 1390 aaPredicted RBP37.34■■■■□ 3.57
VPS37D-201ENST00000324941 ZBED9Q6R2W3 1325 aa37.32■■■■□ 3.56
VPS37D-201ENST00000324941 NGDNQ8NEJ9 315 aaKnown RBP37.31■■■■□ 3.56
VPS37D-201ENST00000324941 PMFBP1Q8TBY8 1022 aa37.31■■■■□ 3.56
VPS37D-201ENST00000324941 MTHFSP49914 203 aa37.3■■■■□ 3.56
VPS37D-201ENST00000324941 CFAP53Q96M91 514 aa37.29■■■■□ 3.56
VPS37D-201ENST00000324941 USP6P35125 1406 aa37.28■■■■□ 3.56
VPS37D-201ENST00000324941 NME9Q86XW9 330 aa37.27■■■■□ 3.56
VPS37D-201ENST00000324941 ADAMTS8Q9UP79 889 aa37.26■■■■□ 3.56
VPS37D-201ENST00000324941 TTC21BQ7Z4L5 1316 aa37.26■■■■□ 3.56
VPS37D-201ENST00000324941 RGPD8O14715 1765 aaPredicted RBP37.26■■■■□ 3.56
VPS37D-201ENST00000324941 STRCQ7RTU9 1775 aa37.25■■■■□ 3.55
VPS37D-201ENST00000324941 COG3Q96JB2 828 aa37.24■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms